mRNA_H-elongata_contig68686.14504.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig68686.14504.1
Unique NamemRNA_H-elongata_contig68686.14504.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig68686.14504.1 vs. uniprot
Match: D8LB92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB92_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 4.500e-119
Identity = 231/393 (58.78%), Postives = 266/393 (67.68%), Query Frame = 1
Query:  100 AMEGTFARIRQATGVSTQEEIIFKLVNQSANFTTLEEEKREAEGKLVKAKAARQSEDARFSCMKASGIGNTELNREISDKLNDEIQELRVEVKMKKAAHERLEVTLTGVKQGSVSLWQRLKPYSFLLDGAEDAHLQRLKEKTDHEVEHDTIKALALSETLLSMMLEVVSASAHDASAGRFPGPGSVGSAGG-----------------------------FRGESGNASGDADDLSDVVSTVNLAESIANSSSTDDTAPAFRNNVRVRSYAQRVEAEQVLEGEEED--VRWSRSSAGRGVGGGNGGVGGRFDRDG-ATEAGIESDDEQAMEDMVPNRTFLKLCSARQHMETIRKIEGDERKKKLAERMECADETEKATLTSKLTRKRQQARAM 1182
            AME TFARIRQATGV+T EE++ KL NQS N  TLEEEKREAE KL +AK ARQSED RFS MKASG+GNTELNR+ISDKLN++I+E RVE KMKKAAHERL+ TLTGVKQG+VSLWQRL+PYSFLLD  + A LQR+KE+TD EV+ DT+KAL LSETLLS+MLEVVS + HDAS  RF       SAGG                               G +GN            ST   AE +          P+ RNN+RVRS A RV AE++LE  +++   RW+    G     G GG        G   +AG+ESDDEQAMED+VP+RTFLKLCS+RQH ET+RKIE DERKKKLAERME ADETEKATLTSKL RKRQQ  AM
Sbjct:   44 AMESTFARIRQATGVNTLEEMVLKLANQSTNHATLEEEKREAESKLARAKEARQSEDTRFSYMKASGVGNTELNRDISDKLNNDIKEYRVEAKMKKAAHERLQNTLTGVKQGAVSLWQRLQPYSFLLDAVDGAQLQRMKEQTDAEVQRDTVKALGLSETLLSIMLEVVSGT-HDASTARFT------SAGGGXXXXXXXXXXXXXVSAXXXXXXXXXXXXXMGSAGNG---------PDSTCASAEEV----------PSMRNNIRVRSIAHRVRAERLLENSDDNDCARWTSPGLG-----GRGGXXXXXXXXGIGVDAGLESDDEQAMEDIVPSRTFLKLCSSRQHTETLRKIESDERKKKLAERMETADETEKATLTSKLARKRQQDLAM 405          
BLAST of mRNA_H-elongata_contig68686.14504.1 vs. uniprot
Match: A0A836CDP6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDP6_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.150e-49
Identity = 159/401 (39.65%), Postives = 213/401 (53.12%), Query Frame = 1
Query:   22 MFLLRRKERSGKEMKAQNESRLRKVSAMEGTFARIRQATGVSTQEEIIFKLVNQSANFTTLEEEKREAEGKLVKAKAARQSEDARFSCMKASGIGNTELNREISDKLNDEIQELRVEVKMKKAAHERLEVTLTGVKQGSVSLWQRLKPYSFLLDGAEDAHLQRLK-------EKTDHEVEHDTIKALALSETLLSMMLEVVSASAHDASAGRFPGPGSVGSAGGFRGESGNASGDADDLSDVVSTVNLAESIANSSST--DDTAPAFRNNVRVRSYAQRVEAEQVLEGEEEDVRWSRSSAGRGVGGGNGGVGGRFDRDGATEAGIESDDEQAME-----DMVPNRTFLKLCSARQHMETIRKIEGDERKKKLAERMECADETEKATLTSKLTRKRQQARAM 1182
            +  LR +E +   ++A NE R R+V+A+E TFAR+RQATGV + E+++ K+ NQ+AN  TLE E+RE E +    +  ++  + RF  MKASG+G+TELNR+ISDKL  E +  R EVK  K A+E+LE TL  V+QG+  L QRL  +  LL+  + A LQR +       E    E E +T  AL++SET+LS MLEV SA     +A          +AGG   E G+   D D+ S         +S    +S    D   A  NNVRV S A R   E                                          +++D  A E     DMVP+R FLKLCS+RQ  E +R+ E  ERK  +A ++E ADE+EKA LTSKL RKRQQ RAM
Sbjct:   18 LIALRGREEALGAVRAANEERAREVAALEATFARVRQATGVHSLEDMVAKIANQAANRETLEREEREVERRAAAVRHRQEELEQRFCDMKASGVGSTELNRDISDKLKAEAESYRAEVKATKIAYEKLEETLLAVRQGAKGLCQRLSVHFGLLEEEDAALLQRAQGAGGAQAEMGGCESEAETALALSVSETVLSKMLEVASAGNTGDTAR---------TAGGEADEDGS---DFDNASARAGRGGALDSGGGGASPLLADADAAMHNNVRVVSGAARSRGEGGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEDGGAYEGDRADDMVPSRAFLKLCSSRQCAEVMRRQEAGERKAVMAAKLEGADESEKAALTSKLARKRQQERAM 406          
BLAST of mRNA_H-elongata_contig68686.14504.1 vs. uniprot
Match: A0A6T7CUQ0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7CUQ0_9STRA)

HSP 1 Score: 164 bits (416), Expect = 6.330e-42
Identity = 136/393 (34.61%), Postives = 211/393 (53.69%), Query Frame = 1
Query:   31 LRRKERSGKEMKAQNESRLRKVSAMEGTFARIRQATGVSTQEEIIFKLVNQSANFTTLEEEKREAEGKLVKAKAARQSEDARFSCMKASGIGNTELNREISDKLNDEIQELRVEVKMKKAAHERLEVTLTGVKQGSVSLWQRLKPYSFLLD--GAEDAHLQRLKEKTDHEVEHDTIKALALSETLLSMMLEVVSASAHDASAGRFPGPGSVGSAGGFRGESGNASGDADDLSDVVSTVNLAESIANSSSTDDTAPAFRNNVRVRSYAQRVEAEQVLEGEEEDVRWSRSSAGRGVGGGNGGVGGRFDRDGATEAGIESDDEQAMEDM-------VPNRTFLKLCSARQHMETIRKIEGDERKKKLAERMECADETEKATLTSKLTRKRQQARAM 1182
            L+ +E   ++++ +NE   R+++ +E  F ++RQATGV++ EE++ K V Q  N   L +E+++ EG+L  AK  ++  + RFS +KASGIG+TELNREISD+LN +I   R+E+K+ KAA ERLE  L  ++QG+  L+QRL+ +  LL+  G +   +  +          + I+A+ LSE +LS M+E V     +AS  RF               +     + D +          E+   SS   D  P  RNNVRVRS  +    ++ ++ + +D    R + GR                      I  ++E+  EDM       VP+R F+KL S+RQH E +RK E D R+KK+ ER+E ADE +K  L+S  +RK+QQ  A+
Sbjct:  199 LQAREADVEKLQKENEENTRQLNKLEEQFTQVRQATGVNSLEEMVDKFVGQEGNRNALIDERKDVEGRLADAKRRKEEAEQRFSELKASGIGSTELNREISDELNHKILSGRMELKVTKAACERLEGVLVALRQGATGLFQRLQTFMHLLESEGLQSGDVATM----------EPIEAINLSEFILSKMMESVGGG--EASPSRF---------------NHTMPNEEDSVDPTDPGAGNDEASTWSSLGLDDLPNPRNNVRVRSMVE----QRDMDAQADDSY--RPTPGR----------------------ISEEEEKGGEDMENVSDHMVPDREFIKLSSSRQHSEMLRKKESDARRKKMQERLEAADEADKKNLSSMASRKKQQRDAI 536          
BLAST of mRNA_H-elongata_contig68686.14504.1 vs. uniprot
Match: A0A7S1TX70_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX70_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.330e-35
Identity = 129/398 (32.41%), Postives = 202/398 (50.75%), Query Frame = 1
Query:   40 KERSGKEMKAQNESRLRKVSAMEGTFARIRQATGVSTQEEIIFKLVNQSANFTTLEEEKREAEGKLVKAKAARQSEDARFSCMKASGIGNTELNREISDKLNDEIQELRVEVKMKKAAHERLEVTLTGVKQGSVSLWQRLKPYSFLLDG------AEDAHLQRLKEKTDHEVEHD---------TIKALALSETLLSMMLEVVSASAHDASAGRFPGPGSVGSAGGFRGESGNASGDADDLSDVVSTVNLAESIANSSSTDDTAPAFRNNVRVRSYAQRVEAEQV---LEGEEEDVRWSRSSAGRGVGGGNGGVGGRFDRDGATEAGIESDDEQAMEDMVPNRTFLKLCSARQHMETIRKIEGDERKKKLAERMECADETEKATLTSKLTRKRQQARA 1179
            +E S ++++ ++E++ R    ME  F +IRQATGV+T E+++ K   Q  N T L EE+REAE +L  AK  +++ + RF  +K SGIG TELNR+I+D LN  I E R   K+ KAA ERL+ TL  +++G+  L+QRL+ Y+ LLDG        +A      +  D +  +           ++ L   E +LS M+E +     + S GRF                     + + +S+ V++V   +  ++ S TD+  P  RNN+RV S  ++ E E +      +EE      S                       +A I+ D      DMVP+R FLKL S RQ  E +RK + + R++++AER+  AD+ +K  +TS   R++ QA A
Sbjct:  106 RENSAEQIRMESEAKNRMAMVMEEAFVQIRQATGVNTLEQMVEKFKEQGTNRTGLLEERREAEDRLADAKRKKEAAEERFMELKQSGIGGTELNRDITDTLNSTILEHRAAYKVSKAATERLQTTLVALREGAAGLFQRLQGYNTLLDGPGSQASTTNAPSSGSFDMVDGQSAYSQDIRANGIAALEGLQQCEIILSKMMEALGGG--EGSPGRFH----------------MLPNEDESVSEEVTSV--TDDSSSLSRTDEPLP-LRNNIRVPSGMKQAEMETLQFSARSDEEPAERMLSDD--------------------LDAIIDEDMADGELDMVPSRQFLKLSSQRQTSEVLRKRDTEFRRQQIAERLAGADDNDKQMMTSNTARRKAQAEA 462          
BLAST of mRNA_H-elongata_contig68686.14504.1 vs. uniprot
Match: A0A7S3JSC0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSC0_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.110e-30
Identity = 125/403 (31.02%), Postives = 203/403 (50.37%), Query Frame = 1
Query:   58 EMKAQNESRLRKVSAMEGTFARIRQATGVSTQEEIIFKLVNQSANFTTLEEEKREAEGKLVKAKAARQSEDARFSCMKASGIGNTELNREISDKLNDEIQELRVEVKMKKAAHERLEVTLTGVKQGSVSLWQRLKPYSFLLDGAEDAHLQRL-----KEKTDHEVEHDTIKALALSETLLSMMLEVVSASAHDASAGRFPGPGSVGSAGGFRGESGNASGDADDLSDVVS----TVNLAE---------------SIANSS--STDDTAPAFRNNVRVRSYAQRVEAEQVLEGEEEDVRWSRSSAGRGVGGGNGGVGGRFDRDGAT--EAG-IESDDEQAMEDMVPNRTFLKLCSARQHMETIRKIEGDERKKKLAERMECADETEKATLTSKLTRKRQQARA 1179
            E++A++E   ++ + +E TF  IRQA+GV + +E++ K  +Q  N  +L  EK+EAE +L  AK  +   D +F+ +KASGIG+ E+NR+I+ +L  EI   R+++K   A+ +RLE  L  ++QG++ L+QRL+P+  LL+G        L     ++  +     D+I A+ ++E LLS M+E++S +                          N   D D+ S  +     T N  E               +I++ S  + D   P+ +NN+RV S  QR  AE V  G   D  +     G+             +   A   +AG IE     A ED+VP+R+FLKL S+RQH E +R+IE D RKK+  E M    + ++  ++++  RK+ Q  A
Sbjct:   44 ELRAKHEFLQKEAAQLESTFLAIRQASGVHSLDEVVDKFQSQEGNRQSLMNEKKEAEERLTNAKNTKYQLDNKFAQLKASGIGSNEMNRDIAQQLETEITHCRLDLKTSNASCQRLESILVALRQGAIGLYQRLRPFVHLLEGEGTIPAAALPNFDHRQSAEPVCSIDSIDAIHVTEILLSKMVEIISGATTT-----------------------NNDADQDETSQTIKDDSCTKNTFEHTQQEKEGEKQFQHTAISHDSEQNNDWRLPSPKNNIRVMSTTQRKSAETVQAGTI-DESFLGPEIGQASQSEPSETTNELNSANALTDQAGNIEIIHNNAHEDVVPSRSFLKLSSSRQHHEMLRRIEHDSRKKRNIE-MADLSQFDRRQISTRAARKKAQNEA 421          
BLAST of mRNA_H-elongata_contig68686.14504.1 vs. uniprot
Match: A0A7R9WKC9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WKC9_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.730e-21
Identity = 65/179 (36.31%), Postives = 111/179 (62.01%), Query Frame = 1
Query:   70 QNESRLRKVSAMEGTFARIRQATGVSTQEEIIFKLVNQSANFTTLEEEKREAEGKLVKAKAARQSEDARFSCMKASGIGNTELNREISDKLNDEIQELRVEVKMKKAAHERLEVTLTGVKQGSVSLWQRLKPYS-FLLDGAEDAHLQRLKEKTDHEVEHDTIKALALSETLLSMMLEVV 603
            +NE++    S++E +FA I++ATGV++  E++ K  N   +   L EEKREAE +L   K + +    ++  +KA+G G+TELNR+I + +++ I + RVE K+ K+ + RLE  L G++QG + L+QRL P+   LLDG +  +L      +  +  +DT++ L ++E +L  ML+ V
Sbjct:    1 ENETKAGAFSSLEESFAYIKRATGVNSLAEMVEKFTNHQEHRDRLLEEKREAEERLSSTKTSLEQAHEKYDQIKANGFGDTELNRQIIEDIDNSITKERVEGKVVKSTNVRLEGVLVGLRQGGMGLYQRLLPFHPTLLDG-DAPNLSESATASAIQAAYDTLEMLKVTEQILGKMLDAV 178          
BLAST of mRNA_H-elongata_contig68686.14504.1 vs. uniprot
Match: A0A7S4E8D6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E8D6_9STRA)

HSP 1 Score: 100 bits (249), Expect = 2.880e-19
Identity = 67/194 (34.54%), Postives = 113/194 (58.25%), Query Frame = 1
Query:   22 MFLLRRKERSGKEMKAQNESRLRKVSAMEGTFARIRQATGVSTQEEIIFKLVNQSANFTTLEEEKREAEGKLVKAKAARQSEDARFSCMKASGIGNTELNREISDKLNDEIQELRVEVKMKKAAHERLEVTLTGVKQGSVSLWQRLKPYSFLLDGAEDAHLQRLKEKTDHEVEHDTIKALALSETLLSMMLEVV 603
            M  L  K+   K ++  +++  ++ + ++  F+ +R+ TGV++  E++ K+  Q  N   L  EKR+A+ +L  AK  R+  + RFS ++ASGIG TE+NR+++D L  +I   R E+K      ERLE TL G++ G+V L++RL PY  LL+   D     +K+        +T +AL LSE +L  M+E++
Sbjct:  294 MDKLNAKKEELKGLRKAHDALEKEFNQLDEDFSEVRKVTGVNSLAEVVEKIKKQKENKKQLVLEKRDADSRLAGAKQMREKLEKRFSELRASGIGTTEMNRDVADDLEKDIDTARAELKTTTQDCERLEGTLIGLRTGAVGLYERLIPYFNLLEDQPDL----VKKGAPDPKTIETAEALVLSEAMLVKMIELL 483          
BLAST of mRNA_H-elongata_contig68686.14504.1 vs. uniprot
Match: K3WYN3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYN3_GLOUD)

HSP 1 Score: 98.6 bits (244), Expect = 1.230e-18
Identity = 105/367 (28.61%), Postives = 175/367 (47.68%), Query Frame = 1
Query:   31 LRRKERSGKEMKAQNESRLRKVSAMEGTFARIRQATGVSTQEEIIFKLVNQSANFTTLEEEKREAEGKLVKAKAARQSEDARFSCMKASGIGNTELNREISDKLNDEIQELRVEVKMKKAAHERLEVTLTGVKQGSVSLWQRLKPYSFLLD--GAE-DAHLQRLKEKTDHEVEHDTIKALALSETLLSMMLEVVSASAHDASAGRFPGPGSVGSAGGFRG------ESGNASGDADDLSDVVSTVNLAESIANSSSTDDTAPAFRNNVRVRSYAQRVEAEQVLEGEEEDVRWSRSSAGRGVGGGNGGVGGRFDRDGATEAGIESDDEQAMEDMVPNRTFLKLCSARQHMETIRKIEGDERKKKLAER 1104
            +  +ER+ + +   N ++ +K +  E    +++ + G ++  E++ K+  QS    +LE+EK +AE KL+ A+  ++      + +KASGIG  ELNRE+ + L  EIQ+ +  +K+ K+A+ERL+  ++GV+QGS  L QRLK +   LD  G E ++ L           + +    LA++E  L+ MLE++                SV S GGF G      E G +  D DD + + S     + + +           RNN+RVR        +Q    E +D   S                 R D  G +++G +  D      +VP+R  LK+ S+R   E +RK E  E++K  AE+
Sbjct:  254 IENRERANEALHLANLAKSQKAADFEEVLDQLKLSAGATSLAEVVEKICAQSTTAISLEKEKAQAEAKLIAARQEKEQAVQTLNELKASGIGGIELNREVYNTLESEIQQAKATLKVNKSAYERLDSVISGVRQGSFGLAQRLKAFDDALDTSGLETNSSLLNAAGINTTADQGENADCLAIAELKLTKMLELIGQQNS-----------SVNSFGGFGGDIEESVEDGTSRADMDDRNTLWSPHMNNDPVLH-----------RNNIRVRPGTTLRMRQQ---NERDDAMDSA----------------RSDMSGTSDSGSDHIDV-----LVPSRDILKMSSSRHFSEIMRKKELVEKQKVAAEK 574          
BLAST of mRNA_H-elongata_contig68686.14504.1 vs. uniprot
Match: A0A2R5FZS7_9STRA (Ryanodine receptor 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZS7_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.910e-15
Identity = 58/134 (43.28%), Postives = 80/134 (59.70%), Query Frame = 1
Query:   94 VSAMEGTFARIRQATGVSTQEEIIFKLVNQSANFTTLEEEKREAEGKLVKAKAARQSEDARFSCMKASGIGNTELNREISDKLNDEIQELRVEVKMKKAAHERLEVTLTGVKQGSVSLWQRLKPYSFLLDGAED 495
            VS  E  F  IR+ATGV + +E++ K + QSAN   L EEK E E +  K K         F+  KA+GIG +ELNRE+ DKL++EI E R E+K+K+  +ERLE  L  V+ G + L  RL P+  +L   +D
Sbjct: 1902 VSTYEEAFNAIREATGVRSLDEMVEKFLGQSANKQALVEEKFEVEQRQRKLKEELARVQTEFAEFKAAGIGGSELNREMYDKLDNEILEARHELKIKQGVNERLEKVLLQVRAGMLGLMGRLAPFKQVLAFEDD 2035          
BLAST of mRNA_H-elongata_contig68686.14504.1 vs. uniprot
Match: A0A0N7L6I8_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L6I8_PLAHL)

HSP 1 Score: 69.3 bits (168), Expect = 4.870e-9
Identity = 54/213 (25.35%), Postives = 116/213 (54.46%), Query Frame = 1
Query:    1 SSESRGSMFL-LRRKERSGKEMKAQNESRLRKVSAMEGTFARIRQATGVSTQEEIIFKLVNQSANFTTLEEEKREAEGKLVKAKAARQSEDARFSCMKASGIGNTELNREISDKLNDEIQELRVEVKMKKAAHERLEVTLTGVKQGSVSLWQRLKPYSFLLDGAEDAHLQRLKEKTDHEVEHDTI-----------KALALSETLLSMMLEVV 603
            S+E    M L +R++E + + + A N  + +K +  E     I+  TG ++  +++ K+  Q A   +L++EK EAE +L+ ++  ++      + +KAS +GN  L+R++   L +EI++ +V +++ K+A + L   ++ ++Q    L +RL+P+  +L+G    H  R+ E+T ++ ++D +            +L + E  L+ + E+V
Sbjct:  299 SAEEESRMLLNIRKREHASEALNAANLIKAQKFADFEALLDEIKLTTGAASLTDVVEKINAQVATSVSLDKEKLEAEERLLVSRRNKELMYKELNELKASYVGNLNLDRDLYSSLENEIRQAKVTLRVNKSAVDHLNGVMSAIRQEFSGLAKRLQPFDDILEGG---HC-RVVEETSNDTDYDNMIPVSSQSSFGTNSLTMIELKLTKIFEIV 507          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68686.14504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LB92_ECTSI4.500e-11958.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CDP6_9STRA1.150e-4939.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6T7CUQ0_9STRA6.330e-4234.61Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1TX70_9STRA1.330e-3532.41Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3JSC0_9STRA1.110e-3031.02Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7R9WKC9_9STRA1.730e-2136.31Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S4E8D6_9STRA2.880e-1934.54Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
K3WYN3_GLOUD1.230e-1828.61Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2R5FZS7_9STRA3.910e-1543.28Ryanodine receptor 1 n=1 Tax=Hondaea fermentalgian... [more]
A0A0N7L6I8_PLAHL4.870e-925.35Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68686contigH-elongata_contig68686:323..2074 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score368.2
Seed ortholog evalue4.6e-99
Seed eggNOG ortholog2880.D8LB92
EggNOG OGs2BW4R@1,2QS4Z@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-27_004750.1
Exons2
Model size1182
Cds size1161
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68686.14504.1prot_H-elongata_contig68686.14504.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig68686 323..2053 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931081.2347982-CDS-H-elongata_contig68686:322..11321622931081.2347982-CDS-H-elongata_contig68686:322..1132Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68686 323..1132 -
1691679690.2041633-CDS-H-elongata_contig68686:322..11321691679690.2041633-CDS-H-elongata_contig68686:322..1132Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68686 323..1132 -
1622931081.2497036-CDS-H-elongata_contig68686:1702..20531622931081.2497036-CDS-H-elongata_contig68686:1702..2053Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68686 1703..2053 -
1691679690.217634-CDS-H-elongata_contig68686:1702..20531691679690.217634-CDS-H-elongata_contig68686:1702..2053Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68686 1703..2053 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931081.265344-UTR-H-elongata_contig68686:2053..20741622931081.265344-UTR-H-elongata_contig68686:2053..2074Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig68686 2054..2074 -
1691679690.2253711-UTR-H-elongata_contig68686:2053..20741691679690.2253711-UTR-H-elongata_contig68686:2053..2074Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig68686 2054..2074 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig68686.14504.1

>prot_H-elongata_contig68686.14504.1 ID=prot_H-elongata_contig68686.14504.1|Name=mRNA_H-elongata_contig68686.14504.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=387bp
MFLLRRKERSGKEMKAQNESRLRKVSAMEGTFARIRQATGVSTQEEIIFK
LVNQSANFTTLEEEKREAEGKLVKAKAARQSEDARFSCMKASGIGNTELN
REISDKLNDEIQELRVEVKMKKAAHERLEVTLTGVKQGSVSLWQRLKPYS
FLLDGAEDAHLQRLKEKTDHEVEHDTIKALALSETLLSMMLEVVSASAHD
ASAGRFPGPGSVGSAGGFRGESGNASGDADDLSDVVSTVNLAESIANSSS
TDDTAPAFRNNVRVRSYAQRVEAEQVLEGEEEDVRWSRSSAGRGVGGGNG
GVGGRFDRDGATEAGIESDDEQAMEDMVPNRTFLKLCSARQHMETIRKIE
GDERKKKLAERMECADETEKATLTSKLTRKRQQARAM
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mRNA from alignment at H-elongata_contig68686:323..2074-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig68686.14504.1 ID=mRNA_H-elongata_contig68686.14504.1|Name=mRNA_H-elongata_contig68686.14504.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1752bp|location=Sequence derived from alignment at H-elongata_contig68686:323..2074- (Himanthalia elongata Himel1 dioecious)
TCCTCGGAATCACGCGGATCCATGTTCTTATTGCGTCGAAAGGAGCGCTC AGGCAAGGAAATGAAGGCGCAGAACGAAAGCCGTCTTCGGAAGGTGTCTG CAATGGAGGGGACATTTGCGCGCATCCGTCAGGCCACAGGCGTTAGCACT CAAGAGGAGATCATCTTCAAGCTGGTCAACCAAAGCGCGAATTTCACCAC TCTGGAGGAGGAGAAGCGCGAGGCAGAGGGCAAGCTCGTCAAGGCAAAGG CGGCGCGGCAGAGCGAGGACGCGCGGTTCTCGTGCATGAAAGCTAGTGGA ATCGGCAACACCGAGTTGAACAGGGAGATTAGTGACAAGTTGAACGACGA GATCCAGGAACTCAGAGTAGAGGTAAAAAATGGGAACTGCGTTTGCATTG CCTTACACCAACACTCGGTTTGTACGATCTTAAAGACGTGCCGATTGCGG AAAAAATATGTCTTGAAAAGGATAACGCGCCGACGTTCGCTGTCAGCCGT CTGAGCTTTGGCTTCAGATGACGCGGTATAATATGTTTCGTCTTCATGGT ACCTCTGGGCATCGAATGCCGAGGGGTGCCCGAGCATTCATATCAATCTC GCTGACATAGAGTACATATTTTGAACGACCGCTGAGCTCTACTGGACAAA ATATCACGCACCCAAAGAACAAAAAGGAAAATATAGCCGCGATCAGAGTT AATTTCGCCTTAGGCGCTGGTCACCGACCACAACCCTAATAAAGCTTATT GCGCCAATCATATTGAGAGACTATTGAGACTGAACCTCGCTTGTTGCTGT GCTCGCCCGAGATGTCTGGAAGTCCCCCAGCCTTCTGAGTCTACTCCTTG TGCACCCGTCAAAGCTCGTTTAAGGCTCTTATGTGCCCTCCCCAACTGCG CTGCAGCCTCAAGTGTCCGCCACCACCCCCGTTACCGCATAGGTCAAGAT GAAGAAGGCGGCGCACGAGCGTCTCGAAGTTACCCTGACGGGCGTGAAAC AGGGCTCGGTCAGCCTATGGCAACGGCTTAAGCCCTATTCCTTCTTGCTG GACGGGGCTGAAGACGCGCACCTGCAGCGCCTTAAGGAGAAGACCGACCA CGAGGTCGAGCATGACACTATCAAGGCGCTGGCGCTCAGCGAGACGCTGC TGAGCATGATGCTGGAGGTAGTTTCTGCCAGCGCTCACGATGCAAGCGCG GGCCGCTTCCCAGGACCGGGAAGCGTAGGCAGCGCAGGCGGCTTCAGGGG GGAAAGCGGTAACGCATCGGGAGACGCGGACGACCTGAGCGACGTGGTTT CGACGGTCAATTTGGCGGAAAGCATCGCTAACAGTAGCAGTACCGACGAC ACGGCGCCGGCTTTCCGAAATAACGTTAGAGTACGAAGCTACGCCCAGCG TGTCGAAGCTGAACAGGTTCTTGAAGGCGAAGAAGAAGATGTTCGCTGGT CTCGGTCAAGCGCTGGACGAGGGGTGGGGGGGGGGAATGGGGGTGTAGGG GGGAGATTTGACAGAGATGGAGCCACCGAGGCAGGTATTGAGAGCGACGA CGAGCAAGCTATGGAAGACATGGTGCCTAACCGGACGTTCCTCAAGCTCT GCAGCGCTCGGCAGCACATGGAGACTATCCGCAAGATCGAGGGAGACGAA CGAAAGAAGAAGCTGGCAGAAAGAATGGAGTGCGCGGACGAGACGGAGAA GGCGACACTCACCTCAAAGCTGACAAGGAAACGGCAGCAAGCCCGCGCCA TG
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Coding sequence (CDS) from alignment at H-elongata_contig68686:323..2074-

>mRNA_H-elongata_contig68686.14504.1 ID=mRNA_H-elongata_contig68686.14504.1|Name=mRNA_H-elongata_contig68686.14504.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2322bp|location=Sequence derived from alignment at H-elongata_contig68686:323..2074- (Himanthalia elongata Himel1 dioecious)
ATGTTCTTATTGCGTCGAAAGGAGCGCTCAGGCAAGGAAATGAAGGCGCA
GAACGAAAGCCGTCTTCGGAAGGTGTCTGCAATGGAGGGGACATTTGCGC
GCATCCGTCAGGCCACAGGCGTTAGCACTCAAGAGGAGATCATCTTCAAG
CTGGTCAACCAAAGCGCGAATTTCACCACTCTGGAGGAGGAGAAGCGCGA
GGCAGAGGGCAAGCTCGTCAAGGCAAAGGCGGCGCGGCAGAGCGAGGACG
CGCGGTTCTCGTGCATGAAAGCTAGTGGAATCGGCAACACCGAGTTGAAC
AGGGAGATTAGTGACAAGTTGAACGACGAGATCCAGGAACTCAGAGTAGA
GATGTTCTTATTGCGTCGAAAGGAGCGCTCAGGCAAGGAAATGAAGGCGC
AGAACGAAAGCCGTCTTCGGAAGGTGTCTGCAATGGAGGGGACATTTGCG
CGCATCCGTCAGGCCACAGGCGTTAGCACTCAAGAGGAGATCATCTTCAA
GCTGGTCAACCAAAGCGCGAATTTCACCACTCTGGAGGAGGAGAAGCGCG
AGGCAGAGGGCAAGCTCGTCAAGGCAAAGGCGGCGCGGCAGAGCGAGGAC
GCGCGGTTCTCGTGCATGAAAGCTAGTGGAATCGGCAACACCGAGTTGAA
CAGGGAGATTAGTGACAAGTTGAACGACGAGATCCAGGAACTCAGAGTAG
AGGTCAAGATGAAGAAGGCGGCGCACGAGCGTCTCGAAGTTACCCTGACG
GGCGTGAAACAGGGCTCGGTCAGCCTATGGCAACGGCTTAAGCCCTATTC
CTTCTTGCTGGACGGGGCTGAAGACGCGCACCTGCAGCGCCTTAAGGAGA
AGACCGACCACGAGGTCGAGCATGACACTATCAAGGCGCTGGCGCTCAGC
GAGACGCTGCTGAGCATGATGCTGGAGGTAGTTTCTGCCAGCGCTCACGA
TGCAAGCGCGGGCCGCTTCCCAGGACCGGGAAGCGTAGGCAGCGCAGGCG
GCTTCAGGGGGGAAAGCGGTAACGCATCGGGAGACGCGGACGACCTGAGC
GACGTGGTTTCGACGGTCAATTTGGCGGAAAGCATCGCTAACAGTAGCAG
TACCGACGACACGGCGCCGGCTTTCCGAAATAACGTTAGAGTACGAAGCT
ACGCCCAGCGTGTCGAAGCTGAACAGGTTCTTGAAGGCGAAGAAGAAGAT
GTTCGCTGGTCTCGGTCAAGCGCTGGACGAGGGGTGGGGGGGGGGAATGG
GGGTGTAGGGGGGAGATTTGACAGAGATGGAGCCACCGAGGCAGGTATTG
AGAGCGACGACGAGCAAGCTATGGAAGACATGGTGCCTAACCGGACGTTC
CTCAAGCTCTGCAGCGCTCGGCAGCACATGGAGACTATCCGCAAGATCGA
GGGAGACGAACGAAAGAAGAAGCTGGCAGAAAGAATGGAGTGCGCGGACG
AGACGGAGAAGGCGACACTCACCTCAAAGCTGACAAGGAAACGGCAGCAA
GCCCGCGCCATGGTCAAGATGAAGAAGGCGGCGCACGAGCGTCTCGAAGT
TACCCTGACGGGCGTGAAACAGGGCTCGGTCAGCCTATGGCAACGGCTTA
AGCCCTATTCCTTCTTGCTGGACGGGGCTGAAGACGCGCACCTGCAGCGC
CTTAAGGAGAAGACCGACCACGAGGTCGAGCATGACACTATCAAGGCGCT
GGCGCTCAGCGAGACGCTGCTGAGCATGATGCTGGAGGTAGTTTCTGCCA
GCGCTCACGATGCAAGCGCGGGCCGCTTCCCAGGACCGGGAAGCGTAGGC
AGCGCAGGCGGCTTCAGGGGGGAAAGCGGTAACGCATCGGGAGACGCGGA
CGACCTGAGCGACGTGGTTTCGACGGTCAATTTGGCGGAAAGCATCGCTA
ACAGTAGCAGTACCGACGACACGGCGCCGGCTTTCCGAAATAACGTTAGA
GTACGAAGCTACGCCCAGCGTGTCGAAGCTGAACAGGTTCTTGAAGGCGA
AGAAGAAGATGTTCGCTGGTCTCGGTCAAGCGCTGGACGAGGGGTGGGGG
GGGGGAATGGGGGTGTAGGGGGGAGATTTGACAGAGATGGAGCCACCGAG
GCAGGTATTGAGAGCGACGACGAGCAAGCTATGGAAGACATGGTGCCTAA
CCGGACGTTCCTCAAGCTCTGCAGCGCTCGGCAGCACATGGAGACTATCC
GCAAGATCGAGGGAGACGAACGAAAGAAGAAGCTGGCAGAAAGAATGGAG
TGCGCGGACGAGACGGAGAAGGCGACACTCACCTCAAAGCTGACAAGGAA
ACGGCAGCAAGCCCGCGCCATG
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