prot_H-elongata_contig68634.14498.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68634.14498.1
Unique Nameprot_H-elongata_contig68634.14498.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length156
Homology
BLAST of mRNA_H-elongata_contig68634.14498.1 vs. uniprot
Match: A0A0A9Y7J8_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y7J8_LYGHE)

HSP 1 Score: 118 bits (296), Expect = 9.170e-31
Identity = 60/151 (39.74%), Postives = 92/151 (60.93%), Query Frame = 0
Query:   13 WKRAIARKMDGQISRGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQVFRQVKGIHYDESSSPTPAQASIRMVLGMIAALDWEVRQLDLDMAYLEAEVEEEIYVELPKAY--------RDSRKQVGLLKKAMYGLVHAGLLW 155
            WK+A+  + +       W +V+RP GKTV+G+R VF+ K+  DG +E+ K RLVA+ F Q+ G HY+E+ +     +SIR V+ + A  + E+ QLD   AYL  E+EEEIY+E+PK          +D   +V  ++KA+YGL  +G +W
Sbjct:   32 WKKAMLEEYNSLEKNKTWTLVDRPEGKTVVGSRWVFRTKLKADGTVERRKARLVAKGFTQIPGTHYNETYTSVARLSSIRFVIALAAERNLELEQLDFTCAYLNGEIEEEIYMEVPKEIETILGRKTQDRENKVSRIQKALYGLKQSGRMW 182          
BLAST of mRNA_H-elongata_contig68634.14498.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 125 bits (314), Expect = 2.150e-30
Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 0
Query:    1 MGEAQALLEWPQWKRAIARKMDGQISRGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQVFRQVKGIHYDESSSPTPAQASIRMVLGMIAALDWEVRQLDLDMAYLEAEVEEEIYVELPKAYRDSRKQ--VGLLKKAMYGLVHAG 152
            + EA    EWP+WK AIA++M    S G + +VE P    ++G++ VF+ K + +G IE YK RLVAQ F QV GI ++E+ +P    ASIR++L + A  DWE+ Q+D+  AYL  ++EEEIY+  P    +  K+  V  LK+ +YGL  +G
Sbjct:  925 LNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSG 1078          
BLAST of mRNA_H-elongata_contig68634.14498.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 123 bits (309), Expect = 1.010e-29
Identity = 61/144 (42.36%), Postives = 94/144 (65.28%), Query Frame = 0
Query:   12 QWKRAIARKMDGQISRGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQVFRQVKGIHYDESSSPTPAQASIRMVLGMIAALDWEVRQLDLDMAYLEAEVEEEIYVELPKAYRDSRKQVGLLKKAMYGLVHAGLLW 155
            +W++A   +++     GV++ V RP  + ++G++ VFK K   DG++EKYK RLVAQ F QV+GI Y+E+ +P     SIR++L + A  DWE+ Q+D+  A+L  E+EEEIY+++P  ++ S   V  LKKA+YGL  A   W
Sbjct: 1009 EWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREW 1152          
BLAST of mRNA_H-elongata_contig68634.14498.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 121 bits (304), Expect = 4.760e-29
Identity = 56/155 (36.13%), Postives = 96/155 (61.94%), Query Frame = 0
Query:    1 MGEAQALLEWPQWKRAIARKMDGQISRGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQVFRQVKGIHYDESSSPTPAQASIRMVLGMIAALDWEVRQLDLDMAYLEAEVEEEIYVELPKAYRDSRKQVGLLKKAMYGLVHAGLLW 155
            + EAQA  EWP+W++A+  + D     G W++ + P  +  +G + VF+RK +K+G++ KYK RLVAQ + Q+ G+ + E+ +P     SIR +L +    +WE+ Q+D+  AYL  +++EEIY+  P+ + D   ++  L+K +YGL  +G  W
Sbjct:  910 LAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREW 1064          
BLAST of mRNA_H-elongata_contig68634.14498.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY)

HSP 1 Score: 120 bits (300), Expect = 1.270e-28
Identity = 62/154 (40.26%), Postives = 94/154 (61.04%), Query Frame = 0
Query:    1 MGEAQALLEWPQWKRAIARKMDGQISRGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQVFRQVKGIHYDESSSPTPAQASIRMVLGMIAALDWEVRQLDLDMAYLEAEVEEEIYVELPKAYRDSRKQ--VGLLKKAMYGLVHAG 152
            + EA    EWP+WK AI ++M    S G + +VE P    ++G++ VF+ K + +  IE YK RLVAQ F QV GI ++E+ +P    ASI ++L + A  DWE+ Q+D+  AYL  ++EEEIY++ P    +  K+  V  LK+ +YGL  +G
Sbjct:  115 LNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSG 268          
BLAST of mRNA_H-elongata_contig68634.14498.1 vs. uniprot
Match: A0A177TV96_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TV96_9BASI)

HSP 1 Score: 119 bits (299), Expect = 2.210e-28
Identity = 57/149 (38.26%), Postives = 93/149 (62.42%), Query Frame = 0
Query:    7 LLEWPQWKRAIARKMDGQISRGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQVFRQVKGIHYDESSSPTPAQASIRMVLGMIAALDWEVRQLDLDMAYLEAEVEEEIYVELPKAYRDSRKQVGLLKKAMYGLVHAGLLW 155
            L EW  WK A+  ++   +    W++VE P G+ V+G+R V+K K+D+DGR  +YK RLVAQ F Q  GI + ++ +P    ++IR+++ +  AL   +  +D+  AYL  +++EE+Y++ P  Y D   +V LL++A+YGL  AG  W
Sbjct:  702 LEEWRHWKEAMDEEIGSLVEMKTWELVELPKGRDVVGSRWVYKLKLDRDGRASRYKGRLVAQGFTQRDGIDFSDTFAPVARLSTIRIIISLALALSLNLGSIDIKTAYLNGKLQEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAGRAW 850          
BLAST of mRNA_H-elongata_contig68634.14498.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 119 bits (299), Expect = 2.250e-28
Identity = 63/155 (40.65%), Postives = 98/155 (63.23%), Query Frame = 0
Query:    3 EAQALLEWPQWKRAIARKMDGQISRGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQVFRQVKGIHYDESSSPTPAQASIRMVLGMIAALDWEVRQLDLDMAYLEAEVEEEIYVELP--KAYRDSRKQVGLLKKAMYGLVHAGLLW 155
            EA    +WPQW++AI ++M        + +VE P    V+G++ VF+ K + +G+IE YK RLVAQ F Q+ GI ++++ +P    ASIR++L + A  DW+V Q+D+  AYL A++EEEI+++ P  +A R     V LL+ A+YGL  +G  W
Sbjct:  965 EAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHAIYGLKQSGRQW 1119          
BLAST of mRNA_H-elongata_contig68634.14498.1 vs. uniprot
Match: UPI001C988E4D (hypothetical protein n=3 Tax=Bacteria TaxID=2 RepID=UPI001C988E4D)

HSP 1 Score: 116 bits (290), Expect = 2.380e-28
Identity = 57/145 (39.31%), Postives = 92/145 (63.45%), Query Frame = 0
Query:   13 WKRAIARKMDGQISRGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQVFRQVKGIHYDESSSPTPAQASIRMVLGMIAALDWEVRQLDLDMAYLEAEVEEEIYVELPKAYRDSRK--QVGLLKKAMYGLVHAGLLW 155
            W+ A+  +MD   S GVW +V+ P G   +G + ++KRKI  DG++E YK RLVA+ + Q +G+ Y+E+ SP     SIR++L + A  D+E+ Q+D+  A+L   +EE++Y+E PK +  S +  +V  LK+++YGL  A   W
Sbjct:  104 WQEAMKSEMDSMYSNGVWTLVDPPEGIVPIGCKWIYKRKIGSDGKVETYKARLVAKGYNQKQGVDYEETFSPVAMLKSIRILLAIAAYYDYEICQMDVKTAFLNGNIEEDLYMEQPKGFISSGEDHKVCKLKRSIYGLKQASRSW 248          
BLAST of mRNA_H-elongata_contig68634.14498.1 vs. uniprot
Match: A0A177TFL0_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TFL0_9BASI)

HSP 1 Score: 119 bits (298), Expect = 3.030e-28
Identity = 61/157 (38.85%), Postives = 95/157 (60.51%), Query Frame = 0
Query:    3 EAQALLEWPQWKRAIARKMDGQISRGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQVFRQVKGIHYDESSSPTPAQASIRMVLGMIAALDWEVRQLDLDMAYLEAEVEEEIYVELPKAYR--DSRKQ--VGLLKKAMYGLVHAGLLW 155
            EA+  L+W +W +A+  +M+  +    W VVE P G+  +G+R V+K K+D+DG   ++K RLVAQ F QV G+ Y E+ +P     S+R++L + A  DW + Q+D+  AYL  ++EEE+Y+  P  Y   DSR+   V  L+  +YGL  +G  W
Sbjct:  753 EAKRRLDWGKWNKAMDEQMEALVGMHTWDVVELPPGRKAIGSRWVYKLKLDEDGVAHRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFDWVIHQVDVVTAYLNGDLEEEVYIRQPPGYEKGDSRRNNMVCRLRLPLYGLKQSGRQW 909          
BLAST of mRNA_H-elongata_contig68634.14498.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 119 bits (298), Expect = 3.050e-28
Identity = 61/155 (39.35%), Postives = 92/155 (59.35%), Query Frame = 0
Query:    1 MGEAQALLEWPQWKRAIARKMDGQISRGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQVFRQVKGIHYDESSSPTPAQASIRMVLGMIAALDWEVRQLDLDMAYLEAEVEEEIYVELPKAYRDSRKQVGLLKKAMYGLVHAGLLW 155
            + EA+A  EW +WK+A+  +M      G +   + P G+  +G + VF +K D+DG I +YK RLVAQ + Q+ G+ Y E+ +P     S+R  LG+ A  D E+ Q+D+  AYL  E+EEEIY+  P+ Y D   +V  L+K +YGL  +G  W
Sbjct:  882 VAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREW 1036          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68634.14498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A9Y7J8_LYGHE9.170e-3139.74Retrovirus-related Pol polyprotein from transposon... [more]
A0A401GN13_9APHY2.150e-3042.21Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A0C2WN23_AMAMK1.010e-2942.36Integrase catalytic domain-containing protein (Fra... [more]
A0A401GYH9_9APHY4.760e-2936.13Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A401GP19_9APHY1.270e-2840.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177TV96_9BASI2.210e-2838.26Integrase catalytic domain-containing protein n=1 ... [more]
A0A401GQU1_9APHY2.250e-2840.65Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
UPI001C988E4D2.380e-2839.31hypothetical protein n=3 Tax=Bacteria TaxID=2 RepI... [more]
A0A177TFL0_9BASI3.030e-2838.85Integrase catalytic domain-containing protein n=1 ... [more]
A0A284QR88_ARMOS3.050e-2839.35Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..155
e-value: 1.8E-31
score: 109.7
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 15..148
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 15..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68634contigH-elongata_contig68634:2189..2656 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68634.14498.1mRNA_H-elongata_contig68634.14498.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68634 1171..2734 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68634.14498.1 ID=prot_H-elongata_contig68634.14498.1|Name=mRNA_H-elongata_contig68634.14498.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MGEAQALLEWPQWKRAIARKMDGQISRGVWQVVERPNGKTVLGTRVVFKR
KIDKDGRIEKYKCRLVAQVFRQVKGIHYDESSSPTPAQASIRMVLGMIAA
LDWEVRQLDLDMAYLEAEVEEEIYVELPKAYRDSRKQVGLLKKAMYGLVH
AGLLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like