mRNA_H-elongata_contig68555.14492.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig68555.14492.1 vs. uniprot
Match: D7FHR9_ECTSI (Oxidoreductase, NAD-binding, myo-inositol 2-dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHR9_ECTSI) HSP 1 Score: 349 bits (896), Expect = 1.250e-118 Identity = 166/188 (88.30%), Postives = 181/188 (96.28%), Query Frame = 1
Query: 1 VQGMEVIDDPEVEAVWICSPSQFHADQIKAASKAGKHIFCEKPIATDLKGTIEAVQIAKECGVKLMTAFQRRFDPSFSRLQSVISAGEVGTPVSAVLQSRDPGAPPFEYVKGGGGLYKDMAIHDLDIARWLMGSCGPNEPVRIYATGACNVDKQIMELKGSNPSEAIDTANILIEFENGSTATIQVRR 564
++GMEVI+DP+VEAVWICSPSQFHADQIKA++KAGKHIFCEKPIATDL GTIEAVQ+AK+CGVKLMTAFQRRFDPSFSRLQ++I AGEVGTPVSAVLQSRDP APPF+YVKGGGGL+KDMAIHDLDIARWLMGSCG NEPVR+YATGACNVDK I+ELK SNPSEAIDTANILIEFE+GSTATIQV R
Sbjct: 78 LEGMEVINDPDVEAVWICSPSQFHADQIKASAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRRFDPSFSRLQAMIEAGEVGTPVSAVLQSRDPAAPPFDYVKGGGGLFKDMAIHDLDIARWLMGSCGTNEPVRVYATGACNVDKSILELKDSNPSEAIDTANILIEFESGSTATIQVCR 265
BLAST of mRNA_H-elongata_contig68555.14492.1 vs. uniprot
Match: A0A835Z516_9STRA (Oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z516_9STRA) HSP 1 Score: 334 bits (856), Expect = 1.580e-112 Identity = 158/184 (85.87%), Postives = 173/184 (94.02%), Query Frame = 1
Query: 13 EVIDDPEVEAVWICSPSQFHADQIKAASKAGKHIFCEKPIATDLKGTIEAVQIAKECGVKLMTAFQRRFDPSFSRLQSVISAGEVGTPVSAVLQSRDPGAPPFEYVKGGGGLYKDMAIHDLDIARWLMGSCGPNEPVRIYATGACNVDKQIMELKGSNPSEAIDTANILIEFENGSTATIQVRR 564
EVI P+VEAVWICSPSQFHADQIK +KAGKHIFCEKPIATDL GTIEA+++AK+CGVKLMTAFQRRFDPSF+RLQ VI+AGEVG PVSAVLQSRDPGAPPF YVKGGGGL+KDMAIHDLDIARWLMGSCG NEPV++YATGACNVD+ I+ELKGSNPSEAIDTANIL+EFE+GSTATIQV R
Sbjct: 83 EVIHHPDVEAVWICSPSQFHADQIKTCAKAGKHIFCEKPIATDLAGTIEAIKVAKDCGVKLMTAFQRRFDPSFARLQKVIAAGEVGKPVSAVLQSRDPGAPPFAYVKGGGGLFKDMAIHDLDIARWLMGSCGKNEPVQVYATGACNVDQAILELKGSNPSEAIDTANILVEFESGSTATIQVCR 266
BLAST of mRNA_H-elongata_contig68555.14492.1 vs. uniprot
Match: A0A835Z446_9STRA (Oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z446_9STRA) HSP 1 Score: 327 bits (837), Expect = 3.600e-109 Identity = 156/184 (84.78%), Postives = 170/184 (92.39%), Query Frame = 1
Query: 13 EVIDDPEVEAVWICSPSQFHADQIKAASKAGKHIFCEKPIATDLKGTIEAVQIAKECGVKLMTAFQRRFDPSFSRLQSVISAGEVGTPVSAVLQSRDPGAPPFEYVKGGGGLYKDMAIHDLDIARWLMGSCGPNEPVRIYATGACNVDKQIMELKGSNPSEAIDTANILIEFENGSTATIQVRR 564
+VI+ P+V+AVWICSPSQFHADQIKA + AGKHIFCEKPIATDL GTIEA+Q A +CGVKLMTAFQRRFDPSFSRLQ VI+AGEVG PVSAVLQSRDPGAPPF YVKGGGGL+KDMAIHDLDIARWLMGSCG NEPV+IYATG+CNVD I+ELK SNPSEAIDTANIL+EFE+GSTATIQV R
Sbjct: 100 DVINHPDVQAVWICSPSQFHADQIKACAAAGKHIFCEKPIATDLAGTIEAIQYANDCGVKLMTAFQRRFDPSFSRLQKVIAAGEVGKPVSAVLQSRDPGAPPFAYVKGGGGLFKDMAIHDLDIARWLMGSCGKNEPVKIYATGSCNVDPAILELKESNPSEAIDTANILVEFESGSTATIQVCR 283
BLAST of mRNA_H-elongata_contig68555.14492.1 vs. uniprot
Match: A0A835Z9N2_9STRA (Oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N2_9STRA) HSP 1 Score: 325 bits (832), Expect = 5.730e-109 Identity = 152/184 (82.61%), Postives = 170/184 (92.39%), Query Frame = 1
Query: 13 EVIDDPEVEAVWICSPSQFHADQIKAASKAGKHIFCEKPIATDLKGTIEAVQIAKECGVKLMTAFQRRFDPSFSRLQSVISAGEVGTPVSAVLQSRDPGAPPFEYVKGGGGLYKDMAIHDLDIARWLMGSCGPNEPVRIYATGACNVDKQIMELKGSNPSEAIDTANILIEFENGSTATIQVRR 564
+VI+ P+V+AVWICSPSQFHADQIKA ++AGKHIFCEKPIATDL GT+EA+Q+AK+CGVKLMTAFQRRFDPSF+RLQ ++ GEVG P+SAVLQSRDP PPF YVKGGGGL+KDMAIHDLDIARWLMGSCG NEPV+IYATGACNVDK I+ELK SNPSEAIDTANILIEFE+GSTATIQV R
Sbjct: 69 DVINHPDVQAVWICSPSQFHADQIKACARAGKHIFCEKPIATDLAGTLEAIQVAKDCGVKLMTAFQRRFDPSFARLQKAVADGEVGRPISAVLQSRDPAPPPFAYVKGGGGLFKDMAIHDLDIARWLMGSCGKNEPVKIYATGACNVDKAILELKDSNPSEAIDTANILIEFESGSTATIQVCR 252
BLAST of mRNA_H-elongata_contig68555.14492.1 vs. uniprot
Match: A0A4D9CRG6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRG6_9STRA) HSP 1 Score: 281 bits (720), Expect = 5.300e-92 Identity = 131/188 (69.68%), Postives = 155/188 (82.45%), Query Frame = 1
Query: 1 VQGMEVIDDPEVEAVWICSPSQFHADQIKAASKAGKHIFCEKPIATDLKGTIEAVQIAKECGVKLMTAFQRRFDPSFSRLQSVISAGEVGTPVSAVLQSRDPGAPPFEYVKGGGGLYKDMAIHDLDIARWLMGSCGPNEPVRIYATGACNVDKQIMELKGSNPSEAIDTANILIEFENGSTATIQVRR 564
+ G EVI+ P+V+AVWICSPSQFHADQIK +KAGKH+FCEKPIATDL GTIEA+++A E G+KLMTAFQRRFDPSF+RL I+ G VG P+SA+LQSRDP PPF YVKGGGGL+KDMAIHDLDIARWLMG+ G N+ V++YATG C +D +I +L+ SNPSEAIDTA I + FENG TI V R
Sbjct: 79 LDGDEVINHPDVQAVWICSPSQFHADQIKKCAKAGKHVFCEKPIATDLNGTIEAIKVADEAGIKLMTAFQRRFDPSFARLHKAIAEGSVGEPISAILQSRDPSPPPFSYVKGGGGLFKDMAIHDLDIARWLMGARGKNDVVQVYATGHCFIDPEIKQLEKSNPSEAIDTAFIQLTFENGGNVTINVCR 266
BLAST of mRNA_H-elongata_contig68555.14492.1 vs. uniprot
Match: A0A7S2CX38_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CX38_9EUKA) HSP 1 Score: 238 bits (608), Expect = 2.880e-74 Identity = 118/186 (63.44%), Postives = 141/186 (75.81%), Query Frame = 1
Query: 7 GMEVIDDPEVEAVWICSPSQFHADQIKAASKAGKHIFCEKPIATDLKGTIEAVQIAKECGVKLMTAFQRRFDPSFSRLQSVISAGEVGTPVSAVLQSRDPGAPPFEYVKGGGGLYKDMAIHDLDIARWLMGSCGPNEPVRIYATGACNVDKQIMELKGSNPSEAIDTANILIEFENGSTATIQVRR 564
M+VI+ P+VEAVWICSPS FHADQIKA + AGKHIFCEKPIATDL TIEA+ ++ GVKLMTA QRRFDP+F R++ I GEVG V+ L SRDP PPFEYVKGGGG++KDMA+HDLD+AR+LMGS EP+ I A G+C +D++I L G EA DTANIL++F NG ATI V R
Sbjct: 103 AMDVINHPDVEAVWICSPSSFHADQIKACAAAGKHIFCEKPIATDLPETIEAINACEQAGVKLMTALQRRFDPNFQRVKQAIVKGEVGDVVTLKLCSRDPAPPPFEYVKGGGGIFKDMAVHDLDMARYLMGS----EPIEILALGSCQIDEEIKVLPGP---EAYDTANILMKFANGKCATIDVCR 281
BLAST of mRNA_H-elongata_contig68555.14492.1 vs. uniprot
Match: A0A7S2RZW6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZW6_9STRA) HSP 1 Score: 235 bits (600), Expect = 8.970e-74 Identity = 115/187 (61.50%), Postives = 146/187 (78.07%), Query Frame = 1
Query: 4 QGMEVIDDPEVEAVWICSPSQFHADQIKAASKAGKHIFCEKPIATDLKGTIEAVQIAKECGVKLMTAFQRRFDPSFSRLQSVISAGEVGTPVSAVLQSRDPGAPPFEYVKGGGGLYKDMAIHDLDIARWLMGSCGPNEPVRIYATGACNVDKQIMELKGSNPSEAIDTANILIEFENGSTATIQVRR 564
+ +VI+DPEV+AVWICSPSQFHA QI+ A+ AGKHIFCEKPIAT+L+ T+EAV+ E VKLMTA QRRFDPSF R+++ I+ EVGTP+ L SRDP PPFEYVKGGGG++KDMAIHDLD++R LMGS EPV + A G+C++DK I EL+ P+E DTA+IL+++E+G +A I V R
Sbjct: 76 EASDVINDPEVDAVWICSPSQFHAAQIREAAAAGKHIFCEKPIATNLEETVEAVRYCDEKQVKLMTALQRRFDPSFDRIKAAIANDEVGTPIVVKLCSRDPAPPPFEYVKGGGGIFKDMAIHDLDMSRHLMGS----EPVEVLALGSCHIDKAITELE--EPTERFDTASILVKYEDGKSAIIDVCR 256
BLAST of mRNA_H-elongata_contig68555.14492.1 vs. uniprot
Match: A0A6U0U7F2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0U7F2_9STRA) HSP 1 Score: 234 bits (596), Expect = 1.300e-73 Identity = 113/184 (61.41%), Postives = 140/184 (76.09%), Query Frame = 1
Query: 13 EVIDDPEVEAVWICSPSQFHADQIKAASKAGKHIFCEKPIATDLKGTIEAVQIAKECGVKLMTAFQRRFDPSFSRLQSVISAGEVGTPVSAVLQSRDPGAPPFEYVKGGGGLYKDMAIHDLDIARWLMGSCGPNEPVRIYATGACNVDKQIMELKGSNPSEAIDTANILIEFENGSTATIQVRR 564
+VI++P+V+AVWICSPS FHADQIK + AGKH+FCEKPIATDL TIEA+ + + GVKL TA QRRFDP+F R++ I GEVG + L SRDP PPFEYVKGGGG++ DMA+HDLD++R+LMG EPV I A G+C++DK+IMEL+GS EA DTA LI++ENG TA I V R
Sbjct: 10 DVIENPDVDAVWICSPSSFHADQIKRCAAAGKHVFCEKPIATDLAETIEAINLCNQAGVKLFTALQRRFDPNFRRVKEAIEGGEVGETIMVKLCSRDPSPPPFEYVKGGGGIFADMAVHDLDMSRFLMGC----EPVEILAFGSCHIDKRIMELEGS---EAYDTAACLIKYENGKTAIIDVCR 186
BLAST of mRNA_H-elongata_contig68555.14492.1 vs. uniprot
Match: A0A7S0J312_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J312_9EUKA) HSP 1 Score: 236 bits (601), Expect = 1.600e-73 Identity = 117/186 (62.90%), Postives = 140/186 (75.27%), Query Frame = 1
Query: 7 GMEVIDDPEVEAVWICSPSQFHADQIKAASKAGKHIFCEKPIATDLKGTIEAVQIAKECGVKLMTAFQRRFDPSFSRLQSVISAGEVGTPVSAVLQSRDPGAPPFEYVKGGGGLYKDMAIHDLDIARWLMGSCGPNEPVRIYATGACNVDKQIMELKGSNPSEAIDTANILIEFENGSTATIQVRR 564
MEVI+ P+VEAVWICSPSQ+HADQIKA + AGKH+FCEKPIATDL TIEA+ E GVKLMTA QRRFDP+F R+++ I AGEVG V L SRDP PPFEYVKGGGG++KDMA+HDLD+AR+LM S EPV I A+G+C +D+ I L G+ EA DTA++L+ F NG A I V R
Sbjct: 104 AMEVINHPDVEAVWICSPSQYHADQIKACAAAGKHVFCEKPIATDLPETIEAINACNEAGVKLMTALQRRFDPNFRRVKTAIEAGEVGDIVQVKLCSRDPSPPPFEYVKGGGGIFKDMAVHDLDMARFLMDS----EPVSILASGSCTIDEAIKVLPGA---EAFDTASVLMRFANGKEAMIDVCR 282
BLAST of mRNA_H-elongata_contig68555.14492.1 vs. uniprot
Match: A0A7S1UAZ2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAZ2_9STRA) HSP 1 Score: 236 bits (603), Expect = 1.860e-73 Identity = 116/185 (62.70%), Postives = 142/185 (76.76%), Query Frame = 1
Query: 10 MEVIDDPEVEAVWICSPSQFHADQIKAASKAGKHIFCEKPIATDLKGTIEAVQIAKECGVKLMTAFQRRFDPSFSRLQSVISAGEVGTPVSAVLQSRDPGAPPFEYVKGGGGLYKDMAIHDLDIARWLMGSCGPNEPVRIYATGACNVDKQIMELKGSNPSEAIDTANILIEFENGSTATIQVRR 564
++VI++P+V+AVWICSPS FHADQIK + AGKHIFCEKPIATDL TIEA+ + + GVKL TA QRRFDP+F R++S I AGEVG L SRDP PPFEYVKGGGG++ DMA+HDLD++R+LMG EPV I ATG+C +DK+IMEL+GS EA DTA +I++ENG TA I V R
Sbjct: 109 VDVIENPDVDAVWICSPSSFHADQIKRCAAAGKHIFCEKPIATDLAETIEAINLCNKAGVKLFTALQRRFDPNFRRVKSAIEAGEVGEHHMVKLCSRDPSPPPFEYVKGGGGIFADMAVHDLDMSRFLMGC----EPVEILATGSCQIDKKIMELEGS---EAYDTATCVIKYENGKTAIIDVCR 286 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68555.14492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig68555.14492.1 >prot_H-elongata_contig68555.14492.1 ID=prot_H-elongata_contig68555.14492.1|Name=mRNA_H-elongata_contig68555.14492.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=185bp MEVIDDPEVEAVWICSPSQFHADQIKAASKAGKHIFCEKPIATDLKGTIEback to top mRNA from alignment at H-elongata_contig68555:216..3014- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig68555.14492.1 ID=mRNA_H-elongata_contig68555.14492.1|Name=mRNA_H-elongata_contig68555.14492.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2799bp|location=Sequence derived from alignment at H-elongata_contig68555:216..3014- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig68555:216..3014- >mRNA_H-elongata_contig68555.14492.1 ID=mRNA_H-elongata_contig68555.14492.1|Name=mRNA_H-elongata_contig68555.14492.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1110bp|location=Sequence derived from alignment at H-elongata_contig68555:216..3014- (Himanthalia elongata Himel1 dioecious)back to top |