mRNA_H-elongata_contig68491.14485.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig68491.14485.1
Unique NamemRNA_H-elongata_contig68491.14485.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig68491.14485.1 vs. uniprot
Match: D7FLG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG3_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 4.210e-64
Identity = 119/141 (84.40%), Postives = 129/141 (91.49%), Query Frame = 1 
Query:    1 LHQPYETRCPYRSLEGLLEEREVTLADSFARYDKLKEDFKFNLGLIEDRDAELGQYEAALQGLKECLRDKEVEASELKMRLDEALSVHRQSAARENEQQSYWQGKCKALRDEMDGLRWAREEESRSARERAEAARAALTRQ 423
            LH+ ++ R   RSLEGLLEERE TLADSFARYDKLKEDFKFNLGLIEDRD ELG+YEAALQGLKE LRDKEVEASE+KMRLDEAL V+RQ+AARENEQQ YWQ KCKALRDEMDGLRWAREEESR++RERAEA RAALTR+
Sbjct:  172 LHEIHDFRL--RSLEGLLEEREATLADSFARYDKLKEDFKFNLGLIEDRDVELGRYEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAARENEQQGYWQAKCKALRDEMDGLRWAREEESRASRERAEAQRAALTRE 310
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BLAST of mRNA_H-elongata_contig68491.14485.1 vs. uniprot
Match: D0N7X4_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N7X4_PHYIT)

HSP 1 Score: 96.3 bits (238), Expect = 6.460e-20
Identity = 63/170 (37.06%), Postives = 98/170 (57.65%), Query Frame = 1 
Query:    1 LHQPYETRCPYRSLEGLLEEREVTLADSFARYDKLKEDFKFNLGLIEDRDAELGQYEAALQGLKECLRDKEVEASELKMRLDEALSVHRQSAARENEQQSYWQGKCKALRDEMDGLRWAREEESRSARERAEAARAALTRQLREREDELEQQRADSAEAFDRIMQQRQEE 510
            LH   E R   R+LE LL ++E     +  +  KL+EDFK+NL L+E RD EL  Y+A    LK  LRD+E E SE + R  E  +  ++   R  EQ++++Q K K  + +++G RW  ++E R   +     R  + RQLRE+++++E QR +    FD +M+QR+ E
Sbjct:   34 LHDINEYRI--RTLEALLRDKETAATAAKQKLSKLQEDFKYNLKLLEGRDEELALYDANFASLKNVLRDREAELSENRAREAELQAELQRMKQRTGEQEAHYQQKLKDAKAQLEGARWKFDDELRRQEDATGTLRRNIERQLREKDEDIENQRRELTVTFDDVMRQRETE 201
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BLAST of mRNA_H-elongata_contig68491.14485.1 vs. uniprot
Match: A0A2R5GES0_9STRA (Proteasome assembly chaperone 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GES0_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 4.280e-17
Identity = 60/156 (38.46%), Postives = 91/156 (58.33%), Query Frame = 1 
Query:   34 RSLEGLLEEREVTLADSFARYDKLKEDFKFNLGLIEDRDAELGQYEAALQGLKECLRDKEVEASELKMRLDEALSVHRQSAARENEQQSYWQGKCKALRDEMDGLRWAREEESRSARERAEAARAALTRQLREREDELEQQRADSAEAFDRIMQQR 501
            +SLE  L  ++  L  +  ++ KL EDF +NL LI DRDAEL +++ A   +KE + DKE EASEL+M++D+  +    +A R  E +   + +   LR  M+G R A E   R  R   E A A L  +L+E++D+LE QR + A  +D + +QR
Sbjct:  368 QSLERTLRGKDEQLRVAEEKFAKLSEDFNYNLQLIADRDAELDKFDTAFAKVKEIISDKEAEASELRMQIDDLEAQLEAAAVRARENEDAHERRLADLRTNMEGGRVALETRHRKERLALEEALAQLEHRLQEKDDDLEAQRREMAATYDELSRQR 523
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BLAST of mRNA_H-elongata_contig68491.14485.1 vs. uniprot
Match: A0A7S2WNF5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WNF5_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 4.990e-16
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1 
Query:   34 RSLEGLLEEREVTLADSFARYDKLKEDFKFNLGLIEDRDAELGQYEAALQGLKECLRDKEVEASELKMRLDEALSVHRQSAARENEQQSYWQGKCKALRDEMDGLRWAREEESRSARE 387
            RSLE  L E+E  L     R+ KLKEDF++NL LIEDRD EL +Y+AA   +K  +RDKE E S+LK+++ E  +  +++  + NE + Y+  K K ++  MD  +W+ E+  R  RE
Sbjct:  114 RSLEQSLREKESQLEVQRERFSKLKEDFQYNLKLIEDRDTELTKYDAAFAQVKSVVRDKEGEVSDLKIQVAEVETQLKRATNKSNELEGYYSEKIKDMKATMDSSKWSLEDAMRRDRE 231
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BLAST of mRNA_H-elongata_contig68491.14485.1 vs. uniprot
Match: A0A8K1CMT4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMT4_PYTOL)

HSP 1 Score: 80.5 bits (197), Expect = 2.020e-14
Identity = 49/118 (41.53%), Postives = 70/118 (59.32%), Query Frame = 1 
Query:    1 LHQPYETRCPYRSLEGLLEEREVTLADSFARYDKLKEDFKFNLGLIEDRDAELGQYEAALQGLKECLRDKEVEASELKMRLDEALSVHRQSAARENEQQSYWQGKCKALRDEMDGLRW 354
            LH   E R   R+LE LL E+E        +++KL+EDFK+NL L+E RD EL  Y+     LK  LRD+E E SELK ++ +  +  +Q   R +EQ+ ++Q K K  R +M+G RW
Sbjct:   46 LHDINEYRI--RTLETLLREKETAAHAYKQKFNKLQEDFKYNLKLLEGRDEELALYDTNFASLKNVLRDREAEISELKAQVADLQTDVKQEQKRASEQEVFFQQKLKDARAQMEGARW 161
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BLAST of mRNA_H-elongata_contig68491.14485.1 vs. uniprot
Match: UPI000B45E90B (coiled-coil domain-containing protein 57-like n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B45E90B)

HSP 1 Score: 76.3 bits (186), Expect = 3.520e-14
Identity = 55/160 (34.38%), Postives = 96/160 (60.00%), Query Frame = 1 
Query:   34 RSLEGLLEEREVTLADSFARYDKLKEDFKFNLGLIEDRDAELGQYEAALQGLKECLRDKEVEASELKMRLDEALS-VHRQSAARENEQQSYWQGKCKALRDEMDGLRWAREEESRSARERAEAARAALTRQLREREDELEQQRADSAEAFDRIMQQRQEE 510
            ++LE   ++++  L +  A++ KLKEDFK+NL ++E+RD EL  Y+     LK  L  K  E SE+K++LD+  +   R++ ARE E Q ++Q + K  + E+D  R +++ E +  R+  E  +  L R+L   E+EL+ QR + +  FD  +++R+ E
Sbjct:    2 QTLEAAYKDKDRQLQEEKAKFTKLKEDFKYNLKVLEERDKELETYDLTFSELKSSLNVKNGEMSEMKIKLDDMKTWSDRENQARE-ELQLHYQQRLKEKQAEIDSYRCSKDSELQQERKEFENFKRTLQRKLTXVEEELDTQRRELSAEFDDALKRREHE 160
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BLAST of mRNA_H-elongata_contig68491.14485.1 vs. uniprot
Match: A0A8B7XXE7_ACAPL (coiled-coil domain-containing protein 57-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XXE7_ACAPL)

HSP 1 Score: 79.7 bits (195), Expect = 3.720e-14
Identity = 54/162 (33.33%), Postives = 93/162 (57.41%), Query Frame = 1 
Query:   34 RSLEGLLEEREVTLADSFARYDKLKEDFKFNLGLIEDRDAELGQYEAALQGLKECLRDKEVEASELKMRLDEALSVHRQSAARENEQQSYWQGKCKALRDEMDGLRWAREEESRSARERAEAARAALTRQLREREDELEQQRADSAEAFDRIMQQRQEETQA 519
            ++LE  + E++  LADS AR+  LK+DFK+NL L+ +RD EL  Y+     LK   + K  E SELK+ +DE      + A  +++ Q ++Q + +  + E++  +  ++ E  + R      +  L RQLRE ++EL+ QR + +  FD  M++R+ E +A
Sbjct:   28 QALEEAVREKDQKLADSQARFQMLKDDFKYNLRLLAERDQELEHYDTVFSELKAAYQAKNAEVSELKICIDELRKTAGREAQAKDDLQRHYQKRIQDRQQEVEKYKLVKDAELEAERGNLSNLKRNLQRQLREVKEELDIQRQELSAGFDEAMRRRENEYRA 189
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BLAST of mRNA_H-elongata_contig68491.14485.1 vs. uniprot
Match: A0A7S3NKN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKN3_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 5.040e-14
Identity = 55/148 (37.16%), Postives = 84/148 (56.76%), Query Frame = 1 
Query:   40 LEGLLEEREVTLADSFARYDKLKEDFKFNLGLIEDRDAELGQYEAALQGLKECLRDKEVEASELKMRLDEALSVHRQSAARENEQQSYWQGKCKALRDEMDGLRWAREEESRSARERAEAARAALTRQLREREDELEQQRADSAEAFD 483
            LE   +ERE  L  +  +  KL EDF+FNL LIE+RDAEL  +E  +  L+E +R++E E S L++ L+E       + +   E+++Y+ GK +  R+E + LR+   E  R A+ER  A +   T ++RE  +  E  R D A A D
Sbjct:   22 LEKYGKEREAALQATKLQLAKLTEDFRFNLSLIEERDAELLSFETEIVTLREGIRERETELSALRVELEEERRQKSLALSSAEEREAYYAGKLRESREETEALRYKIVETQRLAKEREAAMQTECTTRVREALETSESARNDLAAALD 169
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BLAST of mRNA_H-elongata_contig68491.14485.1 vs. uniprot
Match: UPI001BB21E74 (coiled-coil domain-containing protein 57-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB21E74)

HSP 1 Score: 79.3 bits (194), Expect = 5.080e-14
Identity = 53/159 (33.33%), Postives = 92/159 (57.86%), Query Frame = 1 
Query:   34 RSLEGLLEEREVTLADSFARYDKLKEDFKFNLGLIEDRDAELGQYEAALQGLKECLRDKEVEASELKMRLDEALSVHRQSAARENEQQSYWQGKCKALRDEMDGLRWAREEESRSARERAEAARAALTRQLREREDELEQQRADSAEAFDRIMQQRQEE 510
            +SLE  L E++ TL +   ++  LKEDFKFNL L+ DRD EL Q E   + L+  L+ +E   SELK+++DE  +   Q      + Q ++Q + +  + E++  +  ++ E +  R+  EA R  + R++ E E+EL+ QR + +  FD   ++R++E
Sbjct:   37 QSLEDCLREKDKTLKEQKEKFQMLKEDFKFNLKLLADRDQELDQLEVMQEQLRARLQSREAAVSELKIQIDELKTRRSQDERSMEDLQRHYQQRIREKQAEVEQYKICKDAELQKERDEVEALRRDMKRRISEVEEELDIQRREMSAGFDDASRKREKE 195
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BLAST of mRNA_H-elongata_contig68491.14485.1 vs. uniprot
Match: UPI001455813E (coiled-coil domain-containing protein 57-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455813E)

HSP 1 Score: 79.0 bits (193), Expect = 6.890e-14
Identity = 50/159 (31.45%), Postives = 95/159 (59.75%), Query Frame = 1 
Query:   34 RSLEGLLEEREVTLADSFARYDKLKEDFKFNLGLIEDRDAELGQYEAALQGLKECLRDKEVEASELKMRLDEALSVHRQSAARENEQQSYWQGKCKALRDEMDGLRWAREEESRSARERAEAARAALTRQLREREDELEQQRADSAEAFDRIMQQRQEE 510
            +SL+G ++++E  L    A++ KLKEDFK+NL L+ +RD EL +Y+     LK   + K  E SELK+ LD+     ++ +   +E Q ++Q + +  + +++  + A++ E+ + R      +  L RQ+RE E++L+ QR + +  FD ++++R+ E
Sbjct:   41 QSLQGAVKDKEKQLERETAKFKKLKEDFKYNLRLLAERDQELERYDVVFSELKTAFQAKNAEVSELKICLDDLHQTAQRESQARDELQRHYQQRIRDRQTDIEQYKIAKDLETENERTNLANIKRNLQRQVREVEEDLDIQRQELSTGFDEVLRRRENE 199
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68491.14485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLG3_ECTSI4.210e-6484.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D0N7X4_PHYIT6.460e-2037.06Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A2R5GES0_9STRA4.280e-1738.46Proteasome assembly chaperone 2 n=1 Tax=Hondaea fe... [more]
A0A7S2WNF5_9STRA4.990e-1642.37Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A8K1CMT4_PYTOL2.020e-1441.53Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
UPI000B45E90B3.520e-1434.38coiled-coil domain-containing protein 57-like n=1 ... [more]
A0A8B7XXE7_ACAPL3.720e-1433.33coiled-coil domain-containing protein 57-like n=1 ... [more]
A0A7S3NKN3_9STRA5.040e-1437.16Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
UPI001BB21E745.080e-1433.33coiled-coil domain-containing protein 57-like n=1 ... [more]
UPI001455813E6.890e-1431.45coiled-coil domain-containing protein 57-like n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68491contigH-elongata_contig68491:98..3098 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score100.9
Seed ortholog evalue6.2e-19
Seed eggNOG ortholog4787.PITG_06714T0
Preferred nameCCDC57
EggNOG OGs28KF3@1,2QSW3@2759,3Q767@4776
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size525
Cds size525
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68491.14485.1prot_H-elongata_contig68491.14485.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig68491 98..3098 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931079.4726849-CDS-H-elongata_contig68491:97..1891622931079.4726849-CDS-H-elongata_contig68491:97..189Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68491 98..189 +
1691679689.4723735-CDS-H-elongata_contig68491:97..1891691679689.4723735-CDS-H-elongata_contig68491:97..189Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68491 98..189 +
1622931079.4924664-CDS-H-elongata_contig68491:1165..12831622931079.4924664-CDS-H-elongata_contig68491:1165..1283Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68491 1166..1283 +
1691679689.4839995-CDS-H-elongata_contig68491:1165..12831691679689.4839995-CDS-H-elongata_contig68491:1165..1283Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68491 1166..1283 +
1622931079.5140479-CDS-H-elongata_contig68491:2130..22291622931079.5140479-CDS-H-elongata_contig68491:2130..2229Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68491 2131..2229 +
1691679689.4936643-CDS-H-elongata_contig68491:2130..22291691679689.4936643-CDS-H-elongata_contig68491:2130..2229Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68491 2131..2229 +
1622931079.5284777-CDS-H-elongata_contig68491:2882..30981622931079.5284777-CDS-H-elongata_contig68491:2882..3098Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68491 2883..3098 +
1691679689.5136225-CDS-H-elongata_contig68491:2882..30981691679689.5136225-CDS-H-elongata_contig68491:2882..3098Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68491 2883..3098 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig68491.14485.1

>prot_H-elongata_contig68491.14485.1 ID=prot_H-elongata_contig68491.14485.1|Name=mRNA_H-elongata_contig68491.14485.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
LHQPYETRCPYRSLEGLLEEREVTLADSFARYDKLKEDFKFNLGLIEDRD
AELGQYEAALQGLKECLRDKEVEASELKMRLDEALSVHRQSAARENEQQS
YWQGKCKALRDEMDGLRWAREEESRSARERAEAARAALTRQLREREDELE
QQRADSAEAFDRIMQQRQEETQAR*
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mRNA from alignment at H-elongata_contig68491:98..3098+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig68491.14485.1 ID=mRNA_H-elongata_contig68491.14485.1|Name=mRNA_H-elongata_contig68491.14485.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3001bp|location=Sequence derived from alignment at H-elongata_contig68491:98..3098+ (Himanthalia elongata Himel1 dioecious)
CTACATCAGCCTTACGAGACTCGCTGCCCGTACAGGTCACTCGAAGGGCT
CCTGGAGGAGCGTGAGGTAACTCTCGCGGACTCGTTTGCAAGGTGAGCAC
GAGTACAAACCGTGGCTGCATCGAGAACTGACTGTTTCTGTTTTTTATTG
TTCATAGATTATCGTGCCGATTGGGCCGATTCCCATCCCCGCTTGTGGTT
CGCTGTACAGGGGGACTTAGCATTTACAGTGAGTGGTACTGCACTCATAA
ATTATGACGATCAACTCTTGTTCTCGTTTCCGCAGATTTGCGGGGATCCC
CAGTATGTATCTTGTTCAATGTTAGTTGTAGAAAGCATAAGCATGTTGGG
GGGTGGGGGTGGGGGGGGGCACACATGGATATCTTATCTTCCCTTTCTGA
TGGTTATGTACTCCTACTGTCCAGCAAGGAACACACATGAGAGAACAAAG
CATACTTGAACCGTGTACAGCATATTTTGCGTAACAAAGTATACACAGAA
GTGTCTCCTATGCTTAAGTACCACAACCCCTTATGTCTATGTGGTTCGGA
TTTGGTTGCCTCCTTCTTGTGGTCAGCTAAACATGGGAAAATATTTTTCC
CTGTCCCCGTTCGTGCCTGGGGATTTGGCCTCGCGAGACGGGTTCGGCAG
TCCCGTCCCGCGTCAGTCTGCTCATTCTCTCAACCCAGGCTGGATATAGT
GCGTACTCCCGAAACCCTCTCGATCCTCTCGTTTCCCGCGACGGTGTCCA
TATCTACCTCCAACCTCCATCGGGCCACTCCCGATTTCATCCGGTCACGC
AATTGCGTACCGATGGCTTTTACCACCGAAAGTCCGCCAGCGCTGACCTA
GCAGTCCTCAAGGTAGCTTGAGTAACGGGTGCAGCTTATTCAGGTAACCC
TATGGACCAATTATTGTGCGTCTCTCATTTCCCCAGACCCACTATTGGTA
CAGCGGACATGTGCGATACAGTCATAGACAGTATCGGTCATAAATATACA
CAAACGCACGCGTGCAAGCTGTACACGAGGGATGTGTGGGATGTCCGGGC
GATTATCCGTCCAACCAGGTACGACAAGCTGAAGGAAGACTTCAAGTTCA
ACTTGGGGCTGATCGAAGACCGCGACGCCGAGCTCGGGCAGTACGAGGCC
GCTCTCCAGGGGCTGAAAGAGTGCCTGAGAGACAAGGTTAGATGAGACAG
AAGAATCGGCGACAACGTGTGCAGGGAGACAAAGCAGACAGACGGTGCAG
GGCGTGCACACATGATTTCCCACCGTCCGTTCCCGCCTGTTCTTTGTTGC
TTTTACTGTAATATCGAACCGGTCTAGTGTTGCATATCGAATAAAAAAAG
TTTGATATATCGACGATATATATCGAATCGAATCGTGAATCGAACATATT
TGACTTTTTTAGTTCGATTCGATATTTCGGTATATACCCCCACGGGACGT
GTTGGGGGGGGCATTTAAAGGTAATTTTGATGGAAAAAGAAGCGAAAATG
CACCAATTTTTCAGCGGGGCCCCCTCACAAGCCGGGGGGGGGGACGATTG
CGCTCGCTTCGTTCGCCCTTTACGCCTCGCTTCGCTCGGCATCCATATCC
ATATCGATATTGTATTTAATCTCTTCGCTGGTTCGATATGCAACACTAAA
CCGGTGGGTATAGACGAAGCCGTAAATCTAGCAGATCCGTGACCCTTGCC
ACTCGAGCGGGGTCCCAAGGGCCGGAAAAATTAAGCATACCTACGGGAAA
GCCGCACCCCGACTTATTTTATGTTTCGCGTTGCTATTCTGACCACTGCT
GTTTCGTGCGTCTGTTAGTCCCGCTGCGGCCACATATATATAAGTCAAAG
TCGTGCATCGTGGAAGGTTCAGCAGTTGACTTCCCGTTCGGAAATTCCCC
GCTGGTTTGGTGTGCTTGACACCACACATATATGCTGCACCATGCTGGAA
GGTACTAGTAGATGGCGCGCTCCGTATCTCTGCGCACGCATGCGAAACGC
GGATCTGGATCCGGTCTTGTCTTCTCCTCGCAGGAGGTGGAGGCGAGCGA
GCTGAAAATGCGTCTGGACGAGGCGTTGAGCGTGCACAGGCAGTCGGCGG
CGAGGGAAAACGAGCAGCAGAGCTACTGGCAGGTAGAGCGATACGAGCAG
TACGAGTTGCGCTGGCTGACGTTCTCATGCCGTGAAAGGCCGAATTCCTT
TTCCACCATCTGTTACTTGTTTCACATATACAAAATGTTTAAATTGTTTG
CAGGCCTGTGCACCGCATGGTTCAGTCACTCAGTTGTATAGACATTTTAT
GCACGATGATAGTGATAATTACATAGTCGCCGTGCGCGATCCGCGCTCCC
CGCGTGAGTAAGCCGCAAGGCTTCTCTTGACCGACGAACGGGGAACAAAG
CAACACCACCCCCCCCCCCCCCTTGGCCGTCCTTTCCCCATCGCTCACAA
CCCTCCGTCCCCTCCCCCCCCGGGCCCCCCGGCAACCGCTNNNNNNNNNN
AAGCCGCAAGGCTTCTCTTGGCCGACGAAGGGGGAAAAAACCAACCCCCC
CCCCCCCCCCCCCATTGGCCGTCGTTGCTCGATCGATCACAACGCTCCGT
CCCTTCCTCCCGAGGGCGCATTGTCAACAGTTATCTAGGTCTAACATCGG
AGGCATGTAAAACTTGAGTACGCCCGCCTCCCCTCCCTTCCCCCGCCTAC
TCCTCTTACTCCACCTCCTGGGAAAAAGCCTTTGCCGCCGCCACACATTG
ACCCCTCGCCCAATTATTATTTCACGTTGGAACAGGGCAAATGCAAGGCG
TTGCGCGACGAGATGGACGGCCTCCGGTGGGCTCGCGAGGAGGAGTCTCG
GTCGGCAAGGGAGAGGGCGGAGGCCGCGAGGGCGGCGCTGACGAGGCAGC
TACGGGAGCGGGAGGATGAGCTGGAGCAGCAGAGGGCTGACTCGGCCGAG
GCGTTCGATCGGATCATGCAGCAGAGGCAAGAGGAGACTCAGGCCAGGTG
A
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Coding sequence (CDS) from alignment at H-elongata_contig68491:98..3098+

>mRNA_H-elongata_contig68491.14485.1 ID=mRNA_H-elongata_contig68491.14485.1|Name=mRNA_H-elongata_contig68491.14485.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1050bp|location=Sequence derived from alignment at H-elongata_contig68491:98..3098+ (Himanthalia elongata Himel1 dioecious)
CTACATCAGCCTTACGAGACTCGCTGCCCGTACAGGTCACTCGAAGGGCT
CCTGGAGGAGCGTGAGGTAACTCTCGCGGACTCGTTTGCAAGCTACATCA
GCCTTACGAGACTCGCTGCCCGTACAGGTCACTCGAAGGGCTCCTGGAGG
AGCGTGAGGTAACTCTCGCGGACTCGTTTGCAAGGTACGACAAGCTGAAG
GAAGACTTCAAGTTCAACTTGGGGCTGATCGAAGACCGCGACGCCGAGCT
CGGGCAGTACGAGGCCGCTCTCCAGGGGCTGAAAGAGTGCCTGAGAGACA
AGGTACGACAAGCTGAAGGAAGACTTCAAGTTCAACTTGGGGCTGATCGA
AGACCGCGACGCCGAGCTCGGGCAGTACGAGGCCGCTCTCCAGGGGCTGA
AAGAGTGCCTGAGAGACAAGGAGGTGGAGGCGAGCGAGCTGAAAATGCGT
CTGGACGAGGCGTTGAGCGTGCACAGGCAGTCGGCGGCGAGGGAAAACGA
GCAGCAGAGCTACTGGCAGGAGGTGGAGGCGAGCGAGCTGAAAATGCGTC
TGGACGAGGCGTTGAGCGTGCACAGGCAGTCGGCGGCGAGGGAAAACGAG
CAGCAGAGCTACTGGCAGGGCAAATGCAAGGCGTTGCGCGACGAGATGGA
CGGCCTCCGGTGGGCTCGCGAGGAGGAGTCTCGGTCGGCAAGGGAGAGGG
CGGAGGCCGCGAGGGCGGCGCTGACGAGGCAGCTACGGGAGCGGGAGGAT
GAGCTGGAGCAGCAGAGGGCTGACTCGGCCGAGGCGTTCGATCGGATCAT
GCAGCAGAGGCAAGAGGAGACTCAGGCCAGGTGAGGCAAATGCAAGGCGT
TGCGCGACGAGATGGACGGCCTCCGGTGGGCTCGCGAGGAGGAGTCTCGG
TCGGCAAGGGAGAGGGCGGAGGCCGCGAGGGCGGCGCTGACGAGGCAGCT
ACGGGAGCGGGAGGATGAGCTGGAGCAGCAGAGGGCTGACTCGGCCGAGG
CGTTCGATCGGATCATGCAGCAGAGGCAAGAGGAGACTCAGGCCAGGTGA
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