mRNA_H-elongata_contig68481.14484.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: D7G152_ECTSI (Mcl1_mid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G152_ECTSI) HSP 1 Score: 251 bits (641), Expect = 2.540e-75 Identity = 119/157 (75.80%), Postives = 139/157 (88.54%), Query Frame = 1
Query: 1 ATNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPMGESQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKKDQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 471
ATNRQ VRLF+ASGLQGET+MLPGPVV+MVG GD+L V FHKGEP+G+ QNLGY+L DVGGKR LS GG+C SPG+ELTWLG SEE M++ MDS+GLVSAL +SFGWQWTP+LDT VSK+K+ +FWPVGVV+GKLLA TLK GEEHP+AYPRPV+T
Sbjct: 462 ATNRQLVRLFSASGLQGETIMLPGPVVSMVGSGDVLMVAFHKGEPIGDGQNLGYKLLDVGGKRELSKGGLCLSPGSELTWLGSSEEGMVMAMDSAGLVSALTRSFGWQWTPLLDTLKVSKSKRYRFWPVGVVSGKLLAATLKDGEEHPAAYPRPVIT 618
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: A0A6H5KWI2_9PHAE (Mcl1_mid domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI2_9PHAE) HSP 1 Score: 218 bits (554), Expect = 1.300e-66 Identity = 102/137 (74.45%), Postives = 120/137 (87.59%), Query Frame = 1
Query: 61 MLPGPVVTMVGGGDLLAVVFHKGEPMGESQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKKDQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 471
MLPGPVV+MVG GD+L V FHKGEP+G+ QNLGY+L DVGGKR LS GG+C SPG+ELTWLG SEE M++ MDS+GLVSAL +SFGWQWTP+LDT VSK+K+ +FWPVGVV+GKLLA TLK GEEHP+AYPRPV+T
Sbjct: 1 MLPGPVVSMVGSGDVLMVAFHKGEPIGDGQNLGYKLLDVGGKRELSKGGLCLSPGSELTWLGSSEEGMVMAMDSAGLVSALTRSFGWQWTPLLDTLKVSKSKRYRFWPVGVVSGKLLAATLKDGEEHPAAYPRPVIT 137
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: A0A4D9D6X1_9STRA (Mcl1_mid domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6X1_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.000e-43 Identity = 81/163 (49.69%), Postives = 107/163 (65.64%), Query Frame = 1
Query: 1 ATNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPM------GESQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKKDQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 471
AT RQ+VRLFT SGLQ + +PGPVVTMVG G+LLAV +H G P+ SQ+L YQL D+ V+S G VC SP + L W G ML MDS GL+S+L++ F W WTP+L++ + +NK D FWPVGV G L+ L+GG+EHP P+P+++
Sbjct: 546 ATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSPLRRNKMDSFWPVGVFNGSLMCSLLRGGDEHPPTNPKPLIS 708
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: I2CRV7_NANGC (Wd repeat and hmg-box dna-binding protein 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRV7_NANGC) HSP 1 Score: 137 bits (345), Expect = 4.990e-38 Identity = 70/136 (51.47%), Postives = 89/136 (65.44%), Query Frame = 1
Query: 1 ATNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPM------GESQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKKDQFWPVG 390
AT RQ+VRLFT SGLQ + +PGPVVTMVG G+LLAV +H G P+ SQ+L YQL D+ V+S G VC SP + L W G ML MDS GL+S+L++ F W WTP+L++ + +NK D FWPVG
Sbjct: 59 ATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLRRNKMDSFWPVG 194
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: K0S0N3_THAOC (Mcl1_mid domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S0N3_THAOC) HSP 1 Score: 115 bits (287), Expect = 4.420e-27 Identity = 71/165 (43.03%), Postives = 92/165 (55.76%), Query Frame = 1
Query: 4 TNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPMGES---QNLGYQLFDVGGKRVLSSGGVCT-SPGAELTWLGLSEERMLVTMDSSGLVSALM-----QSFGWQWTPVLDTPSVSKNKKDQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 471
T+R+F+RLFTA G+QG + LPGP V +VG L AV FH ES Q LGY ++D V+ SG V + SPG+ L+W G +E+ L MDS G+VS L S W PVLDT + D WPV + + + V L+GG+ HP A RPV T
Sbjct: 59 TSRRFLRLFTAGGVQGPVLWLPGPPVAVVGREGLCAV-FHHRSSSAESDGTQLLGYAVYDGRDGSVVGSGNVSSLSPGSSLSWAGFNEKSALCVMDSEGMVSMLSLPAPSSSTAGAWMPVLDTAGHRRTSTDSHWPVELHGARFVCVLLRGGKTHPDAGRRPVTT 222
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: A0A507D727_9FUNG (Mcl1_mid domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D727_9FUNG) HSP 1 Score: 109 bits (272), Expect = 9.700e-25 Identity = 63/158 (39.87%), Postives = 90/158 (56.96%), Query Frame = 1
Query: 1 ATNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPMGESQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTP-SVSKNKKDQ-FWPVGVVTGKLLAVTLKGGEEHPSAYPRPVL 468
AT+ ++R + SG+Q L GP+V+M G D L VV+H G + + Q L YQ++D+ R ++ + SP AEL W+G SE + T DS G++ L S W P LDT S S K D+ +WP+GV LL V LKG E HP +P+P++
Sbjct: 553 ATDSNYLRFVSNSGIQTAVKCLDGPIVSMSGFRDFLFVVYHAGVLLNKDQRLAYQVYDLSLNRRIADKLLLLSPAAELEWIGFSEAGLPATYDSVGILRMLDISDDLDWIPFLDTRISKSLTKTDESYWPIGVTDTNLLCVILKGAERHPH-FPKPLI 709
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: A0A8J9RDJ8_9CHLO (WD repeat and HMG-box DNA-binding protein 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RDJ8_9CHLO) HSP 1 Score: 106 bits (265), Expect = 8.280e-24 Identity = 55/158 (34.81%), Postives = 89/158 (56.33%), Query Frame = 1
Query: 1 ATNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPMGE-SQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKKDQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 471
AT+RQF+R+F+A+GLQ +PG +V + +++A+ +H G P + SQ+L Y ++ V + ++ +G +C SP L W G SEE ML + DS+G++ ++G W PV + S + + WPVGV + + G P PRPVL+
Sbjct: 512 ATSRQFLRIFSAAGLQLSITSVPGRIVALAAHENMVALAWHSGMPAQDGSQSLAYSVYRVDVQGLVQTGMLCLSPKTSLAWFGFSEEGMLASYDSTGVMRLCCSAYGGSWVPVFEA-SQACAESQTCWPVGVSVADIYCIISAAGTSGPQVVPRPVLS 668
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: I0Z5N9_COCSC (WD40 repeat-like protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z5N9_COCSC) HSP 1 Score: 103 bits (257), Expect = 9.520e-23 Identity = 57/160 (35.62%), Postives = 89/160 (55.62%), Query Frame = 1
Query: 4 TNRQFVRLFTASGLQGE---TVMLPGPVVTMVGGGDLLAVVFHKGEPMGES-QNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKKDQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 471
T+RQ +R+F+A+G + +PG VV M G+L+AVV+H G P + Q L Y L+ V G+ ++ SG +C SP + L+W+G SEE ML T DS G++ +G W PV + S ++ WP+G+ + ++ + P PRPVL+
Sbjct: 425 TSRQLLRVFSAAGKRTRHLSVTSIPGRVVAMAAHGNLVAVVWHAGMPAQDGHQALAYSLYRVDGQELVHSGMLCLSPQSSLSWMGFSEEGMLATHDSLGVMRLRSSVYGGCWVPVFEV-SKGCSENQTCWPIGISSSEIYCIISAASASGPQVVPRPVLS 583
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: UPI00053C13D8 (WD repeat and HMG-box DNA-binding protein 1 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C13D8) HSP 1 Score: 103 bits (257), Expect = 9.930e-23 Identity = 61/159 (38.36%), Postives = 87/159 (54.72%), Query Frame = 1
Query: 4 TNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPM-GESQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKK--DQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 471
T+ +R+F+ GLQ + + GPVV+ G D LAV+ H + + SQ + +++F++ S G V +PG+ LTWLG SEE +L T DS G++ FG W PV SVSK KK + +WPVG+ + L V K P P+PVLT
Sbjct: 551 TSLNLLRIFSEGGLQKHVLSIDGPVVSAAGFKDELAVITHVSDCLPSNSQVMEFKVFNITTMSQSSKGRVPLTPGSSLTWLGFSEEGLLSTCDSEGVLRVFTNQFGGTWIPVF---SVSKEKKQHENYWPVGLSSSNLYCVVCKHPSIFPQVTPKPVLT 706
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: A0A2K1ID13_PHYPA (Mcl1_mid domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1ID13_PHYPA) HSP 1 Score: 102 bits (255), Expect = 1.780e-22 Identity = 54/157 (34.39%), Postives = 86/157 (54.78%), Query Frame = 1
Query: 4 TNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPM-GESQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKKDQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 471
T++ F+R+++ +GLQ L GPVV++VG GD LAVV H P+ Q L + L +V ++ L +G + SPG+ LTW+G SE L + DS G++ F W PV + + + +W VG+ T ++ + K E P P+PV++
Sbjct: 264 TSQYFLRVYSEAGLQRFVTSLGGPVVSLVGNGDRLAVVTHASSPLPSRDQMLEFMLLNVRTQKRLLTGRLPLSPGSTLTWIGFSEAGSLSSYDSQGVLRVYSSEFNGCWIPVFSAAAERTKENETYWVVGLNTTQVYCIVCKAPESQPQVMPKPVMS 420 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig68481.14484.1 >prot_H-elongata_contig68481.14484.1 ID=prot_H-elongata_contig68481.14484.1|Name=mRNA_H-elongata_contig68481.14484.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp ATNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPMGESQback to top mRNA from alignment at H-elongata_contig68481:1310..3068+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig68481.14484.1 ID=mRNA_H-elongata_contig68481.14484.1|Name=mRNA_H-elongata_contig68481.14484.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1759bp|location=Sequence derived from alignment at H-elongata_contig68481:1310..3068+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig68481:1310..3068+ >mRNA_H-elongata_contig68481.14484.1 ID=mRNA_H-elongata_contig68481.14484.1|Name=mRNA_H-elongata_contig68481.14484.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=942bp|location=Sequence derived from alignment at H-elongata_contig68481:1310..3068+ (Himanthalia elongata Himel1 dioecious)back to top |