prot_H-elongata_contig6848.14483.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6848.14483.1
Unique Nameprot_H-elongata_contig6848.14483.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length170
Homology
BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 2.100e-42
Identity = 79/162 (48.77%), Postives = 113/162 (69.75%), Query Frame = 0
Query:   10 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVMSAEM-GTGRGLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESLK 170
            C+IC + Y     FTCR C ++  GI  A ++ ++ +V+  AV+ YV S E  G GRG+  R+ R++PLQSVKI++VAWQIMTQF  +A+VTYP +YQ+FL+ ++V NFD+SWM+SAGC + VDFH +LL+ T+GPI     L  T+  A R HR + E+L+
Sbjct: 1200 CAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLE 1361          
BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 7.350e-42
Identity = 78/162 (48.15%), Postives = 114/162 (70.37%), Query Frame = 0
Query:   10 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVMSAEMGTG-RGLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESLK 170
            CSIC D Y     F C EC +S  GI+ A  + ++A+++  AV+ YV+S ++G G RG   RL R++PLQS KI++V+WQI+TQF  +A+VTYP +YQ FL  + V NFD+SW++SAGC +VVDFH +LL+ T+GPI+ + FL  T+  A R +R + E+L+
Sbjct: 1656 CSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQ 1817          
BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 2.260e-38
Identity = 74/163 (45.40%), Postives = 111/163 (68.10%), Query Frame = 0
Query:   10 CSICIDNYMKSPGFTCRECPE-SVWGIVAALSVTILAIVITFAVMKYVMSAEMGTGR--GLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESL 169
            C IC D Y +   F C +C E S  GI  A+ + +L + +  AV+ YV S E+G GR  G+   + R++PLQS+KI+IV+WQI+TQF ++A+VTYP +YQ  L ++DV NFD+SW++SAGC + ++FHG+LL+ T+ PI+ +  L+ T+  AAR +R   E L
Sbjct: 1099 CGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKL 1261          
BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 2.970e-38
Identity = 72/162 (44.44%), Postives = 111/162 (68.52%), Query Frame = 0
Query:   10 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVM-SAEMGTGRGLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESLK 170
            C+IC D+Y    GFTC +CP    GI+ A ++ ++ +    AV+ YV    +  TG  +   L R++PLQ++KI++VAWQI+TQF + A+VTYP +YQ FL+ +DV NFD+SW++SAGC + +DFH +LLL T+GPIM + FL+ T+   +R +R +  +L+
Sbjct:  606 CAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQ 767          
BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 3.630e-37
Identity = 69/160 (43.12%), Postives = 108/160 (67.50%), Query Frame = 0
Query:   10 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVMSAEM-GTGRGLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQES 168
            C++C   +    GFTCREC +S  GIV A+++ +  I     V+ YV S +  G G+G+  R+  ++PLQSVKI++VAWQ++TQF  +A++TYP +YQ+FL  + + NFD+ W++SAGC   VDFH +LL+ T+GPI+ +  L+ T+  A R HR + ++
Sbjct: 1009 CAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDT 1168          
BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 3.700e-37
Identity = 71/162 (43.83%), Postives = 111/162 (68.52%), Query Frame = 0
Query:   10 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVMSAEM-GTGRGLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESLK 170
            CS+C + Y  S  FTC EC +   GI   + V +  +    A+  +++S EM G  RG+  R+++ +PLQS+KI++V WQI+TQF+++A+VTYP +YQ FL  V++LNFDV W+ SAGC + VDFHG+LL+ T+GP++ ++ L+ T+  A RR   S+ +L+
Sbjct: 1364 CSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQ 1525          
BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 6.710e-37
Identity = 72/162 (44.44%), Postives = 105/162 (64.81%), Query Frame = 0
Query:   10 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVMSAEMGTGR-GLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESLK 170
            C++C D Y     F C  C      I  A  + ++ + + FAV  Y MS  +G  R G+ ARL +++PLQSVKI+IVAWQI+TQF ++A+VTYP +Y+ FL  +DV NFD+SW++SAGC   +DFH +LL  T+ P++ + FL+GT+  A   +R   ESL+
Sbjct:  845 CAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQ 1006          
BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 6.780e-37
Identity = 75/162 (46.30%), Postives = 108/162 (66.67%), Query Frame = 0
Query:   10 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVMSAEMGTGRG-LGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESLK 170
            CSIC D Y  + G++C +C     GIV A+ + +LA+ +   V+ Y+MS E G  R  +  RL  +VPLQSVKI+IV+WQI+TQFA+ A+V YPG+YQ FL  + V  FD+ W++SAGC + + FHG+LL  T+GPI  +  L+GT+  A R +R + E L+
Sbjct: 1016 CSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLR 1177          
BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 4.360e-36
Identity = 71/162 (43.83%), Postives = 108/162 (66.67%), Query Frame = 0
Query:   10 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVMSAEMGTGR-GLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESLK 170
            CSIC + Y  + G++C +C     GI  A+ + ++A+ +   V++Y+MS E G  R  +  RL  +VPLQSVKI+IV+WQI+TQFA+ A+V YPG+YQ F+  + V  FD+ W++S GC + +DFHG+LL  T+GPI  +  L+GT+  A R +R + E L+
Sbjct: 1076 CSICSNGYASNLGYSCSKCFSRSGGIAFAVGLAVVAVFVAVVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLR 1237          
BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 3.830e-35
Identity = 71/163 (43.56%), Postives = 106/163 (65.03%), Query Frame = 0
Query:   10 CSICIDNYMKSPGFTCRECPE-SVWGIVAALSVTILAIVITFAVMKYVMSAE--MGTGRGLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESL 169
            CS+C + Y +  GF C +CPE +  GIV  + + +   ++  A+  YV S E  MGTG G   R+ R++PLQSVKI+I AWQI+TQF +IA+VTYP +Y+ FL ++D+ NFD+ W +S  C I +DFH +LL+ T+ PI  + FL+ T+  A   +R   ++L
Sbjct: 1210 CSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTL 1372          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSC0_ECTSI2.100e-4248.77Polymorphic Outer membrane protein G/I family n=3 ... [more]
D7G5Y7_ECTSI7.350e-4248.15Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5K0E9_9PHAE2.260e-3845.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FHH1_ECTSI2.970e-3844.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LIY0_ECTSI3.630e-3743.13Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5JY65_9PHAE3.700e-3743.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G301_ECTSI6.710e-3744.44Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2X5_ECTSI6.780e-3746.30Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5K7Z1_9PHAE4.360e-3643.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTI5_ECTSI3.830e-3543.56Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 97..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..131
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..170
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..57
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 31..53
NoneNo IPR availableTMHMMTMhelixcoord: 137..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6848contigH-elongata_contig6848:1328..9485 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6848.14483.1mRNA_H-elongata_contig6848.14483.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6848 1327..9485 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6848.14483.1 ID=prot_H-elongata_contig6848.14483.1|Name=mRNA_H-elongata_contig6848.14483.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp
PFATFPDVDCSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITF
AVMKYVMSAEMGTGRGLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVT
YPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSF
LSGTFIYAARRHRASQESLK
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