mRNA_H-elongata_contig6848.14483.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig6848.14483.1
Unique Name	mRNA_H-elongata_contig6848.14483.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Homology

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BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 2.100e-42
Identity = 79/162 (48.77%), Postives = 113/162 (69.75%), Query Frame = 1

Query:   28 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVMSAEM-GTGRGLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESLK 510
            C+IC + Y     FTCR C ++  GI  A ++ ++ +V+  AV+ YV S E  G GRG+  R+ R++PLQSVKI++VAWQIMTQF  +A+VTYP +YQ+FL+ ++V NFD+SWM+SAGC + VDFH +LL+ T+GPI     L  T+  A R HR + E+L+
Sbjct: 1200 CAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLE 1361

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BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 7.350e-42
Identity = 78/162 (48.15%), Postives = 114/162 (70.37%), Query Frame = 1

Query:   28 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVMSAEMGTG-RGLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESLK 510
            CSIC D Y     F C EC +S  GI+ A  + ++A+++  AV+ YV+S ++G G RG   RL R++PLQS KI++V+WQI+TQF  +A+VTYP +YQ FL  + V NFD+SW++SAGC +VVDFH +LL+ T+GPI+ + FL  T+  A R +R + E+L+
Sbjct: 1656 CSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQ 1817

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BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 2.260e-38
Identity = 74/163 (45.40%), Postives = 111/163 (68.10%), Query Frame = 1

Query:   28 CSICIDNYMKSPGFTCRECPE-SVWGIVAALSVTILAIVITFAVMKYVMSAEMGTGR--GLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESL 507
            C IC D Y +   F C +C E S  GI  A+ + +L + +  AV+ YV S E+G GR  G+   + R++PLQS+KI+IV+WQI+TQF ++A+VTYP +YQ  L ++DV NFD+SW++SAGC + ++FHG+LL+ T+ PI+ +  L+ T+  AAR +R   E L
Sbjct: 1099 CGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKL 1261

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BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 2.970e-38
Identity = 72/162 (44.44%), Postives = 111/162 (68.52%), Query Frame = 1

Query:   28 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVM-SAEMGTGRGLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESLK 510
            C+IC D+Y    GFTC +CP    GI+ A ++ ++ +    AV+ YV    +  TG  +   L R++PLQ++KI++VAWQI+TQF + A+VTYP +YQ FL+ +DV NFD+SW++SAGC + +DFH +LLL T+GPIM + FL+ T+   +R +R +  +L+
Sbjct:  606 CAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQ 767

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BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 3.630e-37
Identity = 69/160 (43.12%), Postives = 108/160 (67.50%), Query Frame = 1

Query:   28 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVMSAEM-GTGRGLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQES 504
            C++C   +    GFTCREC +S  GIV A+++ +  I     V+ YV S +  G G+G+  R+  ++PLQSVKI++VAWQ++TQF  +A++TYP +YQ+FL  + + NFD+ W++SAGC   VDFH +LL+ T+GPI+ +  L+ T+  A R HR + ++
Sbjct: 1009 CAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDT 1168

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BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 3.700e-37
Identity = 71/162 (43.83%), Postives = 111/162 (68.52%), Query Frame = 1

Query:   28 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVMSAEM-GTGRGLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESLK 510
            CS+C + Y  S  FTC EC +   GI   + V +  +    A+  +++S EM G  RG+  R+++ +PLQS+KI++V WQI+TQF+++A+VTYP +YQ FL  V++LNFDV W+ SAGC + VDFHG+LL+ T+GP++ ++ L+ T+  A RR   S+ +L+
Sbjct: 1364 CSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQ 1525

[Close]

BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 6.710e-37
Identity = 72/162 (44.44%), Postives = 105/162 (64.81%), Query Frame = 1

Query:   28 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVMSAEMGTGR-GLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESLK 510
            C++C D Y     F C  C      I  A  + ++ + + FAV  Y MS  +G  R G+ ARL +++PLQSVKI+IVAWQI+TQF ++A+VTYP +Y+ FL  +DV NFD+SW++SAGC   +DFH +LL  T+ P++ + FL+GT+  A   +R   ESL+
Sbjct:  845 CAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQ 1006

[Close]

BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 6.780e-37
Identity = 75/162 (46.30%), Postives = 108/162 (66.67%), Query Frame = 1

Query:   28 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVMSAEMGTGRG-LGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESLK 510
            CSIC D Y  + G++C +C     GIV A+ + +LA+ +   V+ Y+MS E G  R  +  RL  +VPLQSVKI+IV+WQI+TQFA+ A+V YPG+YQ FL  + V  FD+ W++SAGC + + FHG+LL  T+GPI  +  L+GT+  A R +R + E L+
Sbjct: 1016 CSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLR 1177

[Close]

BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 4.360e-36
Identity = 71/162 (43.83%), Postives = 108/162 (66.67%), Query Frame = 1

Query:   28 CSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITFAVMKYVMSAEMGTGR-GLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESLK 510
            CSIC + Y  + G++C +C     GI  A+ + ++A+ +   V++Y+MS E G  R  +  RL  +VPLQSVKI+IV+WQI+TQFA+ A+V YPG+YQ F+  + V  FD+ W++S GC + +DFHG+LL  T+GPI  +  L+GT+  A R +R + E L+
Sbjct: 1076 CSICSNGYASNLGYSCSKCFSRSGGIAFAVGLAVVAVFVAVVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLR 1237

[Close]

BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 3.830e-35
Identity = 71/163 (43.56%), Postives = 106/163 (65.03%), Query Frame = 1

Query:   28 CSICIDNYMKSPGFTCRECPE-SVWGIVAALSVTILAIVITFAVMKYVMSAE--MGTGRGLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVTYPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSFLSGTFIYAARRHRASQESL 507
            CS+C + Y +  GF C +CPE +  GIV  + + +   ++  A+  YV S E  MGTG G   R+ R++PLQSVKI+I AWQI+TQF +IA+VTYP +Y+ FL ++D+ NFD+ W +S  C I +DFH +LL+ T+ PI  + FL+ T+  A   +R   ++L
Sbjct: 1210 CSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTL 1372

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot

BLAST of mRNA_H-elongata_contig6848.14483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LSC0_ECTSI	2.100e-42	48.77	Polymorphic Outer membrane protein G/I family n=3 ...	[more]
D7G5Y7_ECTSI	7.350e-42	48.15	Polymorphic Outer membrane protein G/I family n=1 ...	[more]
A0A6H5K0E9_9PHAE	2.260e-38	45.40	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D7FHH1_ECTSI	2.970e-38	44.44	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LIY0_ECTSI	3.630e-37	43.13	Polymorphic Outer membrane protein G/I family n=1 ...	[more]
A0A6H5JY65_9PHAE	3.700e-37	43.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G301_ECTSI	6.710e-37	44.44	Polymorphic Outer membrane protein G/I family n=1 ...	[more]
D7G2X5_ECTSI	6.780e-37	46.30	Adhesin-like protein n=1 Tax=Ectocarpus siliculosu...	[more]
A0A6H5K7Z1_9PHAE	4.360e-36	43.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FTI5_ECTSI	3.830e-35	43.56	Polymorphic outer membrane protein n=1 Tax=Ectocar...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig6848	contig	H-elongata_contig6848:1327..9485 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	158.3
Seed ortholog evalue	3.2e-36
Seed eggNOG ortholog	2880.D8LSC0
EggNOG OGs	2BFIX@1,2S176@2759
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	signal anchor
Exons	2
Model size	511
Cds size	510
Stop	0
Start	0

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622931079.2992022-CDS-H-elongata_contig6848:1327..1561	1622931079.2992022-CDS-H-elongata_contig6848:1327..1561	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig6848 1328..1561 -
1691679689.3982592-CDS-H-elongata_contig6848:1327..1561	1691679689.3982592-CDS-H-elongata_contig6848:1327..1561	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig6848 1328..1561 -
1622931079.3161232-CDS-H-elongata_contig6848:9209..9485	1622931079.3161232-CDS-H-elongata_contig6848:9209..9485	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig6848 9210..9485 -
1691679689.4138749-CDS-H-elongata_contig6848:9209..9485	1691679689.4138749-CDS-H-elongata_contig6848:9209..9485	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig6848 9210..9485 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig6848.14483.1	prot_H-elongata_contig6848.14483.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig6848 1328..9485 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig6848:1327..9485-
coding sequence from alignment at H-elongata_contig6848:1327..9485-

protein sequence of mRNA_H-elongata_contig6848.14483.1

>prot_H-elongata_contig6848.14483.1 ID=prot_H-elongata_contig6848.14483.1|Name=mRNA_H-elongata_contig6848.14483.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp
PFATFPDVDCSICIDNYMKSPGFTCRECPESVWGIVAALSVTILAIVITF
AVMKYVMSAEMGTGRGLGARLLRHVPLQSVKIIIVAWQIMTQFATIADVT
YPGIYQSFLSIVDVLNFDVSWMISAGCFIVVDFHGKLLLLTLGPIMIMSF
LSGTFIYAARRHRASQESLK

mRNA from alignment at H-elongata_contig6848:1327..9485-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig6848.14483.1 ID=mRNA_H-elongata_contig6848.14483.1|Name=mRNA_H-elongata_contig6848.14483.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8159bp|location=Sequence derived from alignment at H-elongata_contig6848:1327..9485- (Himanthalia elongata Himel1 dioecious)
CCTTTCGCCACATTTCCCGACGTAGACTGCTCGATCTGCATTGACAATTA
TATGAAGAGTCCGGGATTTACCTGCAGAGAGTGCCCCGAAAGCGTTTGGG
GAATTGTGGCCGCCTTGTCCGTCACAATTCTCGCTATCGTCATCACGTTT
GCTGTGATGAAGTACGTCATGTCGGCCGAGATGGGTACAGGGCGAGGGCT
AGGGGCCCGTTTGCTTCGTCATGTGCCGCTCCAATCCGTTAAAATTATCA
TCGTTGCGTGGCAAATCATGACTCAGGTGAGCTGTTGCGTACGTTGTGCG
AGAAACTATGTTGAGTTTTTTTTTTTATAACGGCGGGTATTTCGTTCTCG
GCAGTGATGTTTAGACTAGGTTTCATTTTCAAACTAACAATACTCCTAAT
ATATCTAACCAATGCACTTTGATTGACAATGCTATCGTAAAATAAACTCT
CGTATCGAGCGCAGTGTCACTTCTTGCTGTCAAGACGTTCGTGAAAAGTA
CTCTTCAGTTGTCTAAAGAAACCGACCTCAAATGGTTTCCACTCGCCACA
TTGTTTCGTATAAATACGACGACCACGGCGACGGCAATTTTTCTAGGCTG
AGGAGGCAGTATATGTACGACACGGCGGAACACATAATATATTATATTTT
CAATGTATTATGTATTTCAGATCAAAACAAGCACGTACTGACCTCAGTAC
TGCGTCCTCTTGAAAATACAAAAATTAGATATTACTCTCATGTATACTGG
TATTATCGTTCGTCTTAAGCAGATGGGGAAAGAAAATAATTTGTATGATT
CATTTTTAACGATAATTAGCAAGTGGTCCAGGGGTCATGCATCTTTTATT
TAGCATCATGGTAAGCAGGGAGGAGAATTTGAAAACAAAACAAAAAAGGT
CGTGTCCATAAATGTTAGTAGGCTACAAAAACATTAGGTCAAAGGCGACT
GCGACCGAGAGAACTCCCCAACAAAAAACTATTTTTATTTTTAAAACATG
AACTTATTCCAACCCTCCGAACATCCACACCTTTTTAGCGCCGAGGTGCA
ATCCAGGGGACCAACTCGACTTCACATCAATCCCTCGTCCTACTTATTAT
CCAAGAGTGCTCATGCCTAGATGAAAATGTTAGGAGGAGGAAGCAAACAA
CTTTGAAAGCATTACAAAATATCCACCTCATCACGGGGTTCCTGTCTCTG
CGGCAATAATTGGGAAGTGGAAGGCGTTAGCCGAACCATACCGAATGCCG
CCCTGAACCATGCAAGGTTCACAACCGTGATTCGCGTAACCAGTATTGTT
TTTACGCCTAATATTCTTCTGTATGCAAGTGTCGTTCCCCTCCTCCTTTG
CTTGATGAAGACCATGTTCCTCCCCATGAGGATCTCCAGTGATTAGGTAA
TGTCCTGGGCGGTCGAGATCATTTCCCTATCGATCTTCAGCCCTTAAATA
ATCTTGCAGGTATCTCCACCAGGTGTTTTGTGTCAACCACGATGCACTGA
CCCCATTTAGGGTTTTTCTTTCTCCATCTTTCTTGGGACCTGACATACTT
GAAAGCATATTATTTTCAGGCCGCGAGTCTAAGAATAGCCATGTAGATTG
AGGGCCTAAGTACATACTTCGTACTTCGCAGTTACATTTACTTCGATATT
AATATGACGTTCTGAGAGAAACCAGGGGTCGATATATACATATGTTAGAA
TATCATGCACTATTGTACGCATGATAGAATATCAAACCGCCATGATACCA
AAATATACCATAGTGAGTCTTTATTGTTTAGGATATAATAGTCCCTCCTC
TGATCCTCTCTGTGGCTGTATTGCACATGTCCACTACCACTAGTGGGTGT
GGGAAAAGAGGGGCGCACAATAATAATCCATGTGGTTACCTGAATATACT
GTACCCGTTACTCAAGCCGCCTTGAGGACTGCTGGCTCAGTGCCGGCGAC
GTTTCGGAGGCTTTTGTTATTGTTGGTTGCACTCTTAGCAGAAGGAACAA
CCGGATTTGGTTGCCTTCTGCTCGTGATCAGCTGAACAGGGAAAATAATT
TCCCCCTGTCTAAATGCCATCGGTACGCAATTGCGTGACCTGGTGAAATC
GGGATTGTCCAGATGGTAGTTAACGGTAGAGATGGACGCCGTCATGAAAA
ACGAGAAGATCTAAAGGATGCCGGGAGTACGTACCATAATCAGCCTAGGG
GAGAGAATGAGCAGGCTGACGCGGGACGGCACTGCCGAACCCGTCTGGCG
ATACAAAAATCTCAGGCGCGAACGGGGACGGGGGAAAAAACATTTTCCCC
GTTCACCTGACCACAAGCAGGAGGCAACCCTATCAGGCTGGTTCATATTC
TGCTATATGCGATGAACACAGTCACAGTATAACATATCCCGGTCATCAAA
GTAGTAATTAACAGTTCGGCATTTCTCCTTGATATATATATATATATATC
CTCGTTTCTGTCGTCGTGTATAATCTACAGTCTCGTGATAAAACCTCTAC
GCTCTACAGTTTTATATAGAGAGCCTCTCTCAATCGAGAGTAAAATACTA
GTTTGGTATAATCCTATCCGATCTTCTCTCAATGACATCGGTAACTTGAT
CACCTTCTATGTATGAGTGTGGTAGTCACACATAAAGATAAATCGAATTT
GGTTACCCCCTGCGTGTGATCAGCTCAACAGGAATATTGAAATTTCCCCT
TTTTTCGTGCCTGAGAATTTGGTCTCGCGAGAGTGGTTGAGCAGCCTCGT
TCCGCATCAGCCTGCTCACTTCCGGGATCCTCTCGATCATCTCGTTTTCC
GTGACGGCATCCATCTACACCGTCAACCGCCATCGGCCAGTCTCGATTTC
ATCATGTCATGCATTTTGGTTACTGGTGCCGTTTACTACCGAGAGTCCGC
TGGCACTGAGCCAGTAGTCTTCAAGGTAGCTTGAATAACGAATGCAGCCT
ATTCAGGTAACGGCATTTACAATTATTGTGCGTCTCTCTTTTCCTACACC
CACTATTGGTAAAGTGGGAATGGATGATACATTCGCAGACAGTATCGGAG
AACCAAATTAAGTATACGAACTATTTTGAAACGTCGGATAACAAAAAAAC
AAACATAGCAGGGTTTGATCCCTGTCGGTTTTCATCGGTTTGCCTTAGCT
ATGAGGGAACCAAGTCGCTAAATATATATAGCAAGAAACTCAGAAACTCT
TACTGGGCGAGCGACAGCAGCAGTTCATCGGGTTACTGTATATGAGTCCT
TGCATCCATCGATGTCCTTTTATAATGACCATTGATGCAAGACCTCGTCA
ATTCTGACAGTGAAAGCCTCCGAAGAGTATCGACTGGTGGTGATACATCC
CAACAGCGTAAATCGTTTCCCACGGCAATCGTTCTTACGGCAGCAATGTT
GGGACACCGTGGCGAAAAATGTAGGACCTGAAGCGAGAAAAGTAAAAATA
CTCGGAGGTGACACCTGATAAGGCAAAAATCACGATAATGGAGATGTTGA
TGTGTGGTGAGAGTGCTGCTCCTAACACGTCGGAAAAATAAATCCAAGAA
CCTGGGTAAACAGCTGGAACTGAGCGAAAGGCGCAGGGAACGTTTCCGGA
AAACGCGAGGGTTGGACGAGGCGATAAGTCACGGAGCTGCCCGCATGGAA
TACAGAATAACCAGGGCGAGATCTTGGCTGAAAGAGGCGACGTTCGGACG
TTTCACTGTTCTCACAGAAGCTATAAACGACGTGAACAGCATTGGTCATA
TCGCCTCCGTCCTGAGACCCTGTGCTTTATTAGACTGCAAGGACGACATC
ACACCCAAATTCCTTAGCATACCTCTCCTTAAGACTAGAATATCGAATTA
ATTATGTTTCGCTACGTTCGTGATATCCCACACGCCGGGCAAGGAAGCGG
CAGAGGAGCAGAAGGCCAAAGACATGGAGCCCTCAAAAGCAGCGCATCAT
CAGTGCCCGCTCGAAAATACGTCATCAATTTGACCGACCCGAACGCTAAG
ATAGAGAAGGGGAGATAGGGGGGGGAAACAGACACAAGCCGCTAAGAGCA
TATGGCCGAGACGTGTTCAACTTAAAGGACAAACTACTGGTGGTCTTCAC
AGGAGAAAACAAGCATTTCTTAACACCCCAAAACGTGGCGTGTCTAACGC
CTTCCAAAGAGCCAACCGGGACACAAAACGAACCAGGCGGACCGCCGATT
GCTTCGCTGCGTTAATGTCCGCTCGCCCTATCTAGATGCACTATAATCGG
ATAATAAATTCCAATACGCGACAGTCCCCATCCCACGGAGATTGACATCA
CACTGGAGGAGGGAAAGCACGAAGAAAACTTCGAGAAACACCAATGCCTA
GCGATTAATGACTGATATGGAACTTCATTACCAGATTGTAAGCACGATAT
TTGTGTTACTACCACCAATACCCGATGCACCTGCATCAGTGACACCGCCA
ATGACATGATCGACGTCTTGATTTACACTGGGGCTGTACTCGCACCGCGC
TCTAAGGCGAAGAACAGGGTCGGTGCACAGGTCCTGGTGTGGAGGTTAGA
TAAAAGCAGCATTGAAACAGAGAGAAGAGGCTAGGAGGCGCCTACGTGCA
GAGCCTCACAACTTCAATATTCGAGAGGCCGTTAAGATGGTTAGCAACCA
TCTTTGGAAGGTTCGCTAAAATATCATGCTAAGCTTATTCTGGACCATCG
GCCGCAAACTCGAAACAGGCATTTGAGAACGCGATCATACCGGCTTCCAC
AGGCACCTGGGGACGACTAACGTAGAACAGAAGCAACATGCCATCATCAA
CGTCCTCAACAAGAAGGATGGGACAGAGTAAAGTAACTACTAAGGTATCT
CGCTTGTAGTTCGCGCCGGCACGATACTACTGAAGATTATAGTTCGCCGT
CTCAAGGAAAACTTTGAGCGCGTTGAGATCCTCTTTGAAGAGCAGAGTGA
TTTTCGACCGAACCATTCTACCACCGATATGATGGGGATTCGTTAACTAC
AGTAGTTGGCGTAGACGAACCGTCTTCCATGCTATGGATGCTTTATCGAC
CTTACGCAAGTGTACGACTCCGTTGACAAAACCCTTGTCTGGGCAGTACT
TGTTCGTTTTGGCGTGCCACAAATATGATCACGGTTATTCGTCTATTCCA
TGATGGCATGCGATAAAACGTGCGGCGCGAAAACGGGGTTTGCTTGCGGC
GGTTCGCTGGGGAACATTATATTTGTCAAGGATGCGAGCTCGCGCACTTT
CTGTCGAAGAGCTTCTTCGCGGTGGTTATAATCGGGACCTACACGCGTTT
CAAGGCGGACAAATACATCATGGACGACCTCGTGCACCTGAAGATAGAAA
CGGGGGCGGGGAAACGGAAGAGAGCCACGTCCGGAGAGCCAACTCTGGTA
ACGTCGCTGTCGGCCATGCTATACGCTGATGATGCCGGAGTCGTCTCGCA
ATCACCCAAGCAGTCAAGGAATATTATGGGGGTGATTTATCGTCAGCGCG
GCGTTTAGCATCACCGCATCGAAGGCCAGGACTGATGTCACATGTTTGCG
CCCGAAGGGGATACTAAAGCCTACGCCACATTCAGGGTAGACGTAGTCGT
TCAGGTGCACAAAGAAAACAACGAGTTATTGTACCTCGGAGGGAACCTCA
ACCAAAACGTAAACATGCCCATTGAGGTCGACCGGCGCATATGCAGGGCA
TGGTGCATTTTCCGGTAGTACACTCTCAAACTATACGACCGACGAAGCGA
TCCGTTTGAATTCAAACTTCGATGCTGTAGGCCGAGGTACTCAAGTAAAT
TGCTGTACCACGGTTTCGCGTTCCCATCAAAGCTTGATTCGCTGCATCGA
TCGGTGAAAGTAAAAGTACCGATAACCGGATCTCCTATTTGGACGACCTC
ATTAAGATGGGAAAGTATAGCATCGAGGCAATCAAGCACATGGAACAGAT
CATGTCCGCAGGGTTTCTAGCGCACACGAACGGGGTACAAGCTGCGTGGG
GGAGAAGGGAAAAGAGTGGATGGGGCTTCCTTTGGACGACCCCAAATGTT
TCGGAATCAGCGCCCACCATTGGACGATTGCAGCTCAGAACGATGGGAAA
TGCTACAAGACGGCGGGAAAAGGGTGGAACGTTTCGTAACGAAATCATGG
CTGTAGAGAAAGTCAGTATTGGGCTACGGCATGCAGTAGCATGGCCAAAC
GTGAGGAGGAGGACTAAAGAGAGCATAAGCCAAATTAAGGATGATCGTGC
CGGCTTGCTCGCTATATTTCCCCCCCCCCCCACAAGTTGTTGCGAAGATG
TATCCTCCGGGCGTTCGTTTGCCGATGTCATATGAACATTATCTCGCGTT
ATTGTTTTCTTTCTTTTATGGCTCGTTTTTGTACTTTTCTTACATTGAAG
TAGTGGTTCTTCTTCAAACCGGTCTTCGATACGCATATATGCGTCTCGAC
AGCCGCACGCAGTTCGATAACAACTGTGTCTCTTCCCTTCTTCTTTTTGT
CCCTTTTCTTCGTAAACATCGCGTTTTATAAGTGTTTACCGTTTCCTTTC
GTATAAATAGTACGTTTGATTTATTCCTCCCGGATTTTGTTTTCCCACCC
TATGACCATGGGCTTGATTTTGACATAAGCCTTGGTGAGAATTCGATCTA
CCAATTGTTCAATCAAATTATCGTTAGAAAACGTTTGAAACATAGGACGC
TATCTAACAAGTTTTATATTGTTATATCTTGGACCAGATCAGAGGCTGGA
AATTTCAAACATTTATATTTAACATTAAACCAAAGTTAACCACAACCTGA
ACAATATACGTGAACATGAACAACTTCCGGCAGAAGGCCTTCCGCCCTTC
ACATACCATTGCTCATGGGACAACCTGTTGCGACGATGCGTTTTGAGAAC
GATTGTTTCGTGTGTACACAAAAATCGACTTCACGGTCGACGAGCGATAG
GAATTGCAGAACTATTCTCGCGATTTAATATGAAGGCAAAAACCGCCAAA
GGAAGTATAAATAATGTGTAACTTCACAAGCCTGGAGTCCAGATTTGATT
GAATGACAGTACATATGAAGTATAGGACACACTGTTCTTCTTCATTTCAA
AAGCTTATACGTTAAGTATTTTGTTTTCCTTTTAAGTCATGATATCGACG
ACGGTATTGTTTAAGGCTCCAGTTGGTAGCACATAGTAAAAAATATAGTC
CTGAGCGCATTTCTTATTGAAGGAGGTCTATGCCAGATTCTTCTTGGTTT
AAAGATTTTGTTCCTATGCGAGAACTTATTGCCCCAGATGATGTGATTTA
TCTCCCTCGTCCTGGCCCTTCTTGCTAACTCAATAAGTTAATCTTCTTCT
TCACCATTTTCTTCTCTAAGGTCTCGCGCCTTTCGTCATACTCTTGCTTG
TCATACTCCACTATATGGTTTAACCACGAGATTTACAATTTAGGATTTAC
TTCCAACAAGGCATGCAACAGTTGAAATTATTTTCGGCGAAATATTTAAG
GCCTTTCTTTATTTCAAGTTTATATGCTTTGATAACTCAGACTGCATCTT
TGACAACATGTTTTAATCACCACCGTCGAAATCTCGTCTCGATGACTCGA
GCTCACCAAACTTATCTGACCGCGATGGATACCGCGTACATTGTATGTTG
CCTCCTTACATCGAGACGAACCTGGACACGTTCCACGTCATTAGCATTTC
CCAGTCGATGGCGAATTATCAGCCAAAACAATTTTACATCCTGTAAATCA
AGCTTTACTGTAGATTCGAAGAACTTGGTCAATTTTTTAAAAAATAATGT
ATATTGATGCCAATGTAGTGATCACCAGACAAAACACTTTCGAGACAATG
TAATACATATTACTAACGCCGCCCTTATCAACCGTTTCTTGCCTGCACTA
CCCCGACGATGTCTTGCTTTTTAGTTCGCTACTATAGCGGATGTTACCTA
TCCGGGGATATATCAGAGCTTCTTGAGCATCGTGGACGTGCTAAATTTTG
ATGTTTCATGGATGATATCGGCGGGGTGCTTCATCGTCGTCGACTTCCAC
GGCAAGCTTCTACTATTAACACTCGGGCCCATCATGATCATGTCGTTCCT
GAGCGGCACATTCATCTACGCCGCTCGAAGACATCGCGCTTCACAGGAGT
CTTTGAAGA

Coding sequence (CDS) from alignment at H-elongata_contig6848:1327..9485-

>mRNA_H-elongata_contig6848.14483.1 ID=mRNA_H-elongata_contig6848.14483.1|Name=mRNA_H-elongata_contig6848.14483.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1020bp|location=Sequence derived from alignment at H-elongata_contig6848:1327..9485- (Himanthalia elongata Himel1 dioecious)
CCTTTCGCCACATTTCCCGACGTAGACTGCTCGATCTGCATTGACAATTA
TATGAAGAGTCCGGGATTTACCTGCAGAGAGTGCCCCGAAAGCGTTTGGG
GAATTGTGGCCGCCTTGTCCGTCACAATTCTCGCTATCGTCATCACGTTT
GCTGTGATGAAGTACGTCATGTCGGCCGAGATGGGTACAGGGCGAGGGCT
AGGGGCCCGTTTGCTTCGTCATGTGCCGCTCCAATCCGTTAAAATTATCA
TCGTTGCGTGGCAAATCATGACTCAGCCTTTCGCCACATTTCCCGACGTA
GACTGCTCGATCTGCATTGACAATTATATGAAGAGTCCGGGATTTACCTG
CAGAGAGTGCCCCGAAAGCGTTTGGGGAATTGTGGCCGCCTTGTCCGTCA
CAATTCTCGCTATCGTCATCACGTTTGCTGTGATGAAGTACGTCATGTCG
GCCGAGATGGGTACAGGGCGAGGGCTAGGGGCCCGTTTGCTTCGTCATGT
GCCGCTCCAATCCGTTAAAATTATCATCGTTGCGTGGCAAATCATGACTC
AGTTCGCTACTATAGCGGATGTTACCTATCCGGGGATATATCAGAGCTTC
TTGAGCATCGTGGACGTGCTAAATTTTGATGTTTCATGGATGATATCGGC
GGGGTGCTTCATCGTCGTCGACTTCCACGGCAAGCTTCTACTATTAACAC
TCGGGCCCATCATGATCATGTCGTTCCTGAGCGGCACATTCATCTACGCC
GCTCGAAGACATCGCGCTTCACAGGAGTCTTTGAAGTTCGCTACTATAGC
GGATGTTACCTATCCGGGGATATATCAGAGCTTCTTGAGCATCGTGGACG
TGCTAAATTTTGATGTTTCATGGATGATATCGGCGGGGTGCTTCATCGTC
GTCGACTTCCACGGCAAGCTTCTACTATTAACACTCGGGCCCATCATGAT
CATGTCGTTCCTGAGCGGCACATTCATCTACGCCGCTCGAAGACATCGCG
CTTCACAGGAGTCTTTGAAG