prot_H-elongata_contig6843.14475.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6843.14475.1
Unique Nameprot_H-elongata_contig6843.14475.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length135
Homology
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BLAST of mRNA_H-elongata_contig6843.14475.1 vs. uniprot
Match: A0A6H5JPW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPW3_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.570e-24
Identity = 52/88 (59.09%), Postives = 64/88 (72.73%), Query Frame = 0 
Query:    2 RNEVLELYVIYQATLLHPLDVPQWTEVFQQTAKRLLAAKPLQSLTKRGRLAVVMSIVGSQRIELFAPTVLAVLACDCHDEWTSLKLLE 89
            R E+ EL+ ++QA LLHPLD  +WT V   T   LL+A+PLQ LTK GRLAV+M IVGS R  LF+P VLAVLACD  D++ S KLL+
Sbjct:   74 RQELEELFTVWQAKLLHPLDRSRWTNVLNTTVASLLSAQPLQCLTKSGRLAVMMCIVGSGRAGLFSPAVLAVLACDWVDDYGSFKLLQ 161
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6843.14475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JPW3_9PHAE1.570e-2459.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6843contigH-elongata_contig6843:2354..4841 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6843.14475.1mRNA_H-elongata_contig6843.14475.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6843 2352..4945 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6843.14475.1 ID=prot_H-elongata_contig6843.14475.1|Name=mRNA_H-elongata_contig6843.14475.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
MRNEVLELYVIYQATLLHPLDVPQWTEVFQQTAKRLLAAKPLQSLTKRGR
LAVVMSIVGSQRIELFAPTVLAVLACDCHDEWTSLKLLEDAVRQSSLSRL
RSLRSEHGQGGVAISNPTGWDVSPNRWCPGAKAN*
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