prot_H-elongata_contig68402.14473.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68402.14473.1
Unique Nameprot_H-elongata_contig68402.14473.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length107
Homology
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BLAST of mRNA_H-elongata_contig68402.14473.1 vs. uniprot
Match: D7FIC3_ECTSI (SUN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIC3_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 2.540e-33
Identity = 64/107 (59.81%), Postives = 74/107 (69.16%), Query Frame = 0 
Query:    1 YANVIAARAQINSDELTSATFTPDGWLFPSTLMHQAGVENGIGPVDSVISEDSSLGRCWVMKGSVGRVTIQLPTEITVDGVSLEHASRMVTHESTSAPRDFEVCKLK 107
            YAN       + S  + S T+TP  W  PS   H AGVENG+GPV+SVISE SSLG CW M GS G VTIQLP +ITVDGVS+EH SRMVT ES SAP++ EV  +K
Sbjct:  245 YANAALGGKVLTSKGMVSDTYTPSSWWGPSRYWHGAGVENGVGPVESVISEGSSLGACWAMSGSEGLVTIQLPKKITVDGVSVEHVSRMVTTESGSAPKELEVWGMK 351
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BLAST of mRNA_H-elongata_contig68402.14473.1 vs. uniprot
Match: A0A6H5J860_9PHAE (SUN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J860_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 2.100e-32
Identity = 63/107 (58.88%), Postives = 74/107 (69.16%), Query Frame = 0 
Query:    1 YANVIAARAQINSDELTSATFTPDGWLFPSTLMHQAGVENGIGPVDSVISEDSSLGRCWVMKGSVGRVTIQLPTEITVDGVSLEHASRMVTHESTSAPRDFEVCKLK 107
            YAN       + S  + S T+TP  W  PS   H AGVENG+GPV+SVISE SSLG CW M GS G VTIQLP +ITVDGVS+EH SRMVT ES SAP++ EV  ++
Sbjct:  365 YANAALGGKVLTSKGMVSETYTPSSWWGPSRYWHGAGVENGVGPVESVISEGSSLGACWAMSGSEGLVTIQLPEKITVDGVSVEHVSRMVTTESGSAPKEIEVWGMR 471
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BLAST of mRNA_H-elongata_contig68402.14473.1 vs. uniprot
Match: A0A1D1XD20_9ARAE (SUN domain-containing protein 2 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XD20_9ARAE)

HSP 1 Score: 48.5 bits (114), Expect = 8.500e-5
Identity = 19/48 (39.58%), Postives = 34/48 (70.83%), Query Frame = 0 
Query:   56 GRCWVMKGSVGRVTIQLPTEITVDGVSLEHASRMVTHESTSAPRDFEV 103
            G+C+ + GS G V ++L T I +D ++LEH S+ V ++ +SAP+D ++
Sbjct:    7 GQCFPLHGSTGFVEVKLRTAIILDSITLEHVSKSVAYDRSSAPKDCQI 54
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68402.14473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FIC3_ECTSI2.540e-3359.81SUN domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5J860_9PHAE2.100e-3258.88SUN domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A1D1XD20_9ARAE8.500e-539.58SUN domain-containing protein 2 (Fragment) n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012919SUN domainPFAMPF07738Sad1_UNCcoord: 44..105
e-value: 7.5E-13
score: 48.6
IPR012919SUN domainPROSITEPS51469SUNcoord: 8..107
score: 13.984
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 1..107
e-value: 3.0E-18
score: 68.1
NoneNo IPR availablePANTHERPTHR12911SAD1/UNC-84-LIKE PROTEIN-RELATEDcoord: 15..104
NoneNo IPR availablePANTHERPTHR12911:SF8KLAROID, ISOFORM A-RELATEDcoord: 15..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68402contigH-elongata_contig68402:2111..3148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68402.14473.1mRNA_H-elongata_contig68402.14473.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68402 2111..3148 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68402.14473.1 ID=prot_H-elongata_contig68402.14473.1|Name=mRNA_H-elongata_contig68402.14473.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
YANVIAARAQINSDELTSATFTPDGWLFPSTLMHQAGVENGIGPVDSVIS
EDSSLGRCWVMKGSVGRVTIQLPTEITVDGVSLEHASRMVTHESTSAPRD
FEVCKLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012919SUN_dom
IPR008979Galactose-bd-like_sf