prot_H-elongata_contig68390.14468.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68390.14468.1
Unique Nameprot_H-elongata_contig68390.14468.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
BLAST of mRNA_H-elongata_contig68390.14468.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 3.330e-18
Identity = 41/74 (55.41%), Postives = 54/74 (72.97%), Query Frame = 0
Query:    9 ATGGVCCTELEEAALEATYTAAVDGLSTECADYYKQLLCGVCGSYSGHLYERLVDDLGTNDGLTMKNEYCSGLT 82
            A  G CCT+ EEA ++  +  AV  L+ +C D YKQ++CGVCGSYSGHLYERL  +LG  DG+TMK+++C  LT
Sbjct:   47 AQSGACCTDAEEALVQLRHE-AVGNLTGDCDDLYKQVVCGVCGSYSGHLYERLGAELGVLDGMTMKSDFCEELT 119          
BLAST of mRNA_H-elongata_contig68390.14468.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 2.610e-16
Identity = 45/88 (51.14%), Postives = 54/88 (61.36%), Query Frame = 0
Query:    1 MTFCSMDYATGGVCCTELEEAALEATYTAAVD-GL--STECADYYKQLLCGVCGSYSGHLYERLVDDLGTNDGLTMKNEYCSGLTTAC 85
            +T+C    A  G CCT  EE  +EA + AA   G+  ST CA  YKQ++CGVC SYS HLYE L D  G  DGLTMK+E+C  L   C
Sbjct:   34 LTYCDNSIAMSGACCTNEEEDIVEANFNAAFGVGVVPSTACAALYKQVVCGVCHSYSAHLYEYLTDG-GMLDGLTMKSEFCEELVDEC 120          
BLAST of mRNA_H-elongata_contig68390.14468.1 vs. uniprot
Match: A0A6H5JZF5_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF5_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 4.650e-8
Identity = 27/42 (64.29%), Postives = 30/42 (71.43%), Query Frame = 0
Query:   44 QLLCGVCGSYSGHLYERLVDDLGTNDGLTMKNEYCSGLTTAC 85
            Q++CGVC SYS HLYE L D  G  DGLTMKNE+C  L  AC
Sbjct:   35 QVVCGVCHSYSAHLYEYLTDG-GMLDGLTMKNEFCESLVDAC 75          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68390.14468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G6T7_ECTSI3.330e-1855.41WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4P3_ECTSI2.610e-1651.14Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
A0A6H5JZF5_9PHAE4.650e-864.29GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68390contigH-elongata_contig68390:186..1057 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68390.14468.1mRNA_H-elongata_contig68390.14468.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68390 186..1082 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68390.14468.1 ID=prot_H-elongata_contig68390.14468.1|Name=mRNA_H-elongata_contig68390.14468.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
MTFCSMDYATGGVCCTELEEAALEATYTAAVDGLSTECADYYKQLLCGVC
GSYSGHLYERLVDDLGTNDGLTMKNEYCSGLTTACGS
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