mRNA_H-elongata_contig68274.14453.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig68274.14453.1 vs. uniprot
Match: D7FLP4_ECTSI (rRNA adenine N(6)-methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP4_ECTSI) HSP 1 Score: 217 bits (553), Expect = 1.310e-68 Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 1
Query: 4 GIVERASVQRTDVVLEIGPGTGNLTVHLLERAKRVIAVELDTRMVREVMKRFEGTEKEKSLHIIQGDVLKTPLPFFDVLVANVPYNISSPLLFKLLAHRPMFRCAVIMFQEEFAQRLTAR 363
GIV+RA+V+RTDVVLEIGPGTGNLTV LLERAKRVIAVELDTRMVREVMKR EGTE EKSL IIQGDVLK PLPFFDVLVANVPYNISSPLLFKLLAHRPMFRCAVIMFQEEFAQRLTAR
Sbjct: 2 GIVDRAAVKRTDVVLEIGPGTGNLTVRLLERAKRVIAVELDTRMVREVMKRVEGTEWEKSLQIIQGDVLKVPLPFFDVLVANVPYNISSPLLFKLLAHRPMFRCAVIMFQEEFAQRLTAR 121
BLAST of mRNA_H-elongata_contig68274.14453.1 vs. uniprot
Match: W7TYW7_9STRA (rRNA adenine N(6)-methyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYW7_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.170e-59 Identity = 93/121 (76.86%), Postives = 109/121 (90.08%), Query Frame = 1
Query: 1 QGIVERASVQRTDVVLEIGPGTGNLTVHLLERAKRVIAVELDTRMVREVMKRFEGTEKEKSLHIIQGDVLKTPLPFFDVLVANVPYNISSPLLFKLLAHRPMFRCAVIMFQEEFAQRLTAR 363
QGIV++A+++ TDVV+E+GPGTGNLTV LL+RAK+V+AVE D RMVREV+KR EGT+ +SLH+IQGDVLK LPFFDV VAN+PY ISSPLLFKLLAHRPMFRCAVIM QEEFAQRLTA+
Sbjct: 4 QGIVDKAAIRSTDVVMEVGPGTGNLTVKLLDRAKKVVAVEYDVRMVREVLKRVEGTDHARSLHVIQGDVLKVALPFFDVCVANIPYQISSPLLFKLLAHRPMFRCAVIMLQEEFAQRLTAK 124
BLAST of mRNA_H-elongata_contig68274.14453.1 vs. uniprot
Match: A0A835ZDH2_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH2_9STRA) HSP 1 Score: 189 bits (481), Expect = 6.200e-58 Identity = 94/121 (77.69%), Postives = 106/121 (87.60%), Query Frame = 1
Query: 1 QGIVERASVQRTDVVLEIGPGTGNLTVHLLERAKRVIAVELDTRMVREVMKRFEGTEKEKSLHIIQGDVLKTPLPFFDVLVANVPYNISSPLLFKLLAHRPMFRCAVIMFQEEFAQRLTAR 363
QGIV+RA+++ +DVVLEIGPGTGNLTV LLERAK+VIAVE D RM+REV+KR EG+ L +I GDVLK LPFFDVLVANVPYNISSPLLFKLLAHRPM+RCAVIMFQEEFA RL+AR
Sbjct: 4 QGIVDRAAIKASDVVLEIGPGTGNLTVQLLERAKKVIAVEYDKRMIREVLKRVEGSTSASKLQVIHGDVLKVALPFFDVLVANVPYNISSPLLFKLLAHRPMYRCAVIMFQEEFAMRLSAR 124
BLAST of mRNA_H-elongata_contig68274.14453.1 vs. uniprot
Match: A0A812WD46_SYMMI (rRNA adenine N(6)-methyltransferase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WD46_SYMMI) HSP 1 Score: 182 bits (463), Expect = 2.250e-54 Identity = 88/121 (72.73%), Postives = 106/121 (87.60%), Query Frame = 1
Query: 1 QGIVERASVQRTDVVLEIGPGTGNLTVHLLERAKRVIAVELDTRMVREVMKRFEGTEKEKSLHIIQGDVLKTPLPFFDVLVANVPYNISSPLLFKLLAHRPMFRCAVIMFQEEFAQRLTAR 363
+ IV+RA+++ TD+ LEIGPGTGNLTV LLE++K+VIAVE D RMVREV+KR EGT+KE +L IIQGDVLK LPFFDV VAN+PY ISSP LFK+L+HRP+FRCAV+MFQ EFAQRLTA+
Sbjct: 66 ESIVDRAAIRPTDITLEIGPGTGNLTVKLLEKSKKVIAVEFDRRMVREVLKRVEGTDKEHNLQIIQGDVLKVDLPFFDVCVANLPYQISSPFLFKMLSHRPLFRCAVVMFQLEFAQRLTAK 186
BLAST of mRNA_H-elongata_contig68274.14453.1 vs. uniprot
Match: A0A8J2SV13_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SV13_9STRA) HSP 1 Score: 181 bits (458), Expect = 2.640e-54 Identity = 89/119 (74.79%), Postives = 101/119 (84.87%), Query Frame = 1
Query: 7 IVERASVQRTDVVLEIGPGTGNLTVHLLERAKRVIAVELDTRMVREVMKRFEGTEKEKSLHIIQGDVLKTPLPFFDVLVANVPYNISSPLLFKLLAHRPMFRCAVIMFQEEFAQRLTAR 363
IVERA ++ TD VLE+GPGTGNLTV LL RAK ++AVE D RMVREV KR EG ++ L +IQGD+LKTPLPFFDV VAN+PYNISSP LFKLLAHRP FRCAV+MFQEEFAQRL+AR
Sbjct: 42 IVERAKLRPTDAVLEVGPGTGNLTVKLLARAKSLVAVEFDPRMVREVKKRVEGDPRKHRLELIQGDILKTPLPFFDVCVANLPYNISSPFLFKLLAHRPYFRCAVVMFQEEFAQRLSAR 160
BLAST of mRNA_H-elongata_contig68274.14453.1 vs. uniprot
Match: A0A7S2HH75_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HH75_9STRA) HSP 1 Score: 177 bits (448), Expect = 8.960e-53 Identity = 82/119 (68.91%), Postives = 106/119 (89.08%), Query Frame = 1
Query: 7 IVERASVQRTDVVLEIGPGTGNLTVHLLERAKRVIAVELDTRMVREVMKRFEGTEKEKSLHIIQGDVLKTPLPFFDVLVANVPYNISSPLLFKLLAHRPMFRCAVIMFQEEFAQRLTAR 363
I++++++Q TDVVLEIGPGTGN+T+ LL+++K+V+A+E D+RM+REV+KR EGT +E+ L I+QGD +KT PFFDV VANVPY ISSPL+FKLL+HRPMFRCAV+MFQEEFA RLTAR
Sbjct: 43 IIQKSALQPTDVVLEIGPGTGNMTMPLLQQSKKVVAIEYDSRMIREVLKRVEGTSEERKLQIVQGDAIKTKWPFFDVCVANVPYQISSPLVFKLLSHRPMFRCAVMMFQEEFALRLTAR 161
BLAST of mRNA_H-elongata_contig68274.14453.1 vs. uniprot
Match: A0A5A8CQ78_CAFRO (rRNA adenine N(6)-methyltransferase n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CQ78_CAFRO) HSP 1 Score: 176 bits (446), Expect = 1.400e-52 Identity = 86/121 (71.07%), Postives = 105/121 (86.78%), Query Frame = 1
Query: 1 QGIVERASVQRTDVVLEIGPGTGNLTVHLLERAKRVIAVELDTRMVREVMKRFEGTEKEKSLHIIQGDVLKTPLPFFDVLVANVPYNISSPLLFKLLAHRPMFRCAVIMFQEEFAQRLTAR 363
+GIV+RA+V TD VLEIGPGTGN+TV LLERAK+VIAVE+D RM+ EV KR +GTE ++ L II+GDV+++ LPFFDV VANVPYNISS ++FKLLAHRP+FRCAV+MFQEEFA RL A+
Sbjct: 33 KGIVDRAAVTTTDTVLEIGPGTGNMTVKLLERAKKVIAVEVDPRMIAEVTKRVQGTEFQRKLSIIRGDVIRSALPFFDVCVANVPYNISSAIVFKLLAHRPLFRCAVLMFQEEFALRLAAK 153
BLAST of mRNA_H-elongata_contig68274.14453.1 vs. uniprot
Match: A0A7S3GSR8_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GSR8_9STRA) HSP 1 Score: 175 bits (443), Expect = 7.950e-52 Identity = 83/119 (69.75%), Postives = 101/119 (84.87%), Query Frame = 1
Query: 7 IVERASVQRTDVVLEIGPGTGNLTVHLLERAKRVIAVELDTRMVREVMKRFEGTEKEKSLHIIQGDVLKTPLPFFDVLVANVPYNISSPLLFKLLAHRPMFRCAVIMFQEEFAQRLTAR 363
IV +A ++ TD VLE+GPGTGNLTV LLE +K+++A+E D RMVREV+KR EGT E++LH+IQGDVLK +P+FDV VAN+PY ISSP LFK+L+HRPMFRCAVIMFQ EFAQRL AR
Sbjct: 59 IVAKAGIRPTDTVLEVGPGTGNLTVRLLEVSKKLVAIEFDRRMVREVLKRVEGTANERNLHVIQGDVLKVDIPYFDVCVANLPYQISSPFLFKMLSHRPMFRCAVIMFQLEFAQRLIAR 177
BLAST of mRNA_H-elongata_contig68274.14453.1 vs. uniprot
Match: A0A7S3V6V6_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6V6_9STRA) HSP 1 Score: 174 bits (440), Expect = 2.830e-51 Identity = 86/119 (72.27%), Postives = 102/119 (85.71%), Query Frame = 1
Query: 7 IVERASVQRTDVVLEIGPGTGNLTVHLLERAKRVIAVELDTRMVREVMKRFEGTEKEKSLHIIQGDVLKTPLPFFDVLVANVPYNISSPLLFKLLAHRPMFRCAVIMFQEEFAQRLTAR 363
IV +A+++ TDVVLEIGPGTGN+TV LLE++K+ IA+E D+RMVREV+KR EGT E+ L +IQGD LK PFFDV+VANVPY ISS L+FKLLAHRPMFRCAV+MFQEEFA RLTAR
Sbjct: 59 IVAKAAIKSTDVVLEIGPGTGNMTVPLLEQSKKTIALEFDSRMVREVIKRVEGTPLERKLQVIQGDALKVAWPFFDVMVANVPYQISSGLVFKLLAHRPMFRCAVMMFQEEFALRLTAR 177
BLAST of mRNA_H-elongata_contig68274.14453.1 vs. uniprot
Match: A0A7S2KAL4_9STRA (rRNA adenine N(6)-methyltransferase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KAL4_9STRA) HSP 1 Score: 172 bits (437), Expect = 2.940e-51 Identity = 83/119 (69.75%), Postives = 100/119 (84.03%), Query Frame = 1
Query: 7 IVERASVQRTDVVLEIGPGTGNLTVHLLERAKRVIAVELDTRMVREVMKRFEGTEKEKSLHIIQGDVLKTPLPFFDVLVANVPYNISSPLLFKLLAHRPMFRCAVIMFQEEFAQRLTAR 363
IV +A ++ TD VLEIGPGTGN+T+ LL+++K V+A+E DTRMVREV+KR EGT E+ L +IQGD +KT PFFDV VANVPY ISS L+FKLL+HRPMFRCAV+MFQEEFA RLTAR
Sbjct: 45 IVAKAGLKSTDTVLEIGPGTGNMTIPLLQQSKNVVAIEYDTRMVREVLKRVEGTSSERKLKVIQGDAIKTRFPFFDVCVANVPYQISSALVFKLLSHRPMFRCAVMMFQEEFALRLTAR 163 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68274.14453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig68274.14453.1 >prot_H-elongata_contig68274.14453.1 ID=prot_H-elongata_contig68274.14453.1|Name=mRNA_H-elongata_contig68274.14453.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp QGIVERASVQRTDVVLEIGPGTGNLTVHLLERAKRVIAVELDTRMVREVMback to top mRNA from alignment at H-elongata_contig68274:1324..3073+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig68274.14453.1 ID=mRNA_H-elongata_contig68274.14453.1|Name=mRNA_H-elongata_contig68274.14453.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1750bp|location=Sequence derived from alignment at H-elongata_contig68274:1324..3073+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig68274:1324..3073+ >mRNA_H-elongata_contig68274.14453.1 ID=mRNA_H-elongata_contig68274.14453.1|Name=mRNA_H-elongata_contig68274.14453.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=732bp|location=Sequence derived from alignment at H-elongata_contig68274:1324..3073+ (Himanthalia elongata Himel1 dioecious)back to top |