prot_H-elongata_contig681.14439.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig681.14439.1
Unique Nameprot_H-elongata_contig681.14439.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length225
Homology
[Close]
BLAST of mRNA_H-elongata_contig681.14439.1 vs. uniprot
Match: A0A2D2AH49_9PHAE (Prolycopene isomerase-like2 n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A2D2AH49_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 8.280e-58
Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 0 
Query:  127 VDVVVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAHTFERDGYKFDSGPSIFSGFTGPVSNPLKQVLDVLGEELPCVRYDGWGNLTPSGYFKFNL 225
            VDVVVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAH+FERDGYKFDSGPSIFSGFTGPV NPLKQVL+VL EELPC+RYDGWGNLTPSGYFKF+L
Sbjct:  144 VDVVVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAHSFERDGYKFDSGPSIFSGFTGPVPNPLKQVLNVLDEELPCIRYDGWGNLTPSGYFKFDL 242
[Close]
BLAST of mRNA_H-elongata_contig681.14439.1 vs. uniprot
Match: A0A2D2AH25_SCYLO (Prolycopene isomerase-like2 n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A2D2AH25_SCYLO)

HSP 1 Score: 203 bits (516), Expect = 1.170e-57
Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 0 
Query:  127 VDVVVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAHTFERDGYKFDSGPSIFSGFTGPVSNPLKQVLDVLGEELPCVRYDGWGNLTPSGYFKFNL 225
            VDVVVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAH+FERDGYKFDSGPSIFSGFTGPV NPLKQVL+VL EELPC+RYDGWGNLTPSGYFKF+L
Sbjct:  174 VDVVVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAHSFERDGYKFDSGPSIFSGFTGPVPNPLKQVLNVLDEELPCIRYDGWGNLTPSGYFKFDL 272
[Close]
BLAST of mRNA_H-elongata_contig681.14439.1 vs. uniprot
Match: D7FIR6_ECTSI (Carotenoid isomerase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR6_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 8.470e-56
Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 0 
Query:  130 VVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAHTFERDGYKFDSGPSIFSGFTGPVSNPLKQVLDVLGEELPCVRYDGWGNLTPSGYFKFNL 225
            VVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAH+FERDGYKFDSGPSIFSGFTGPV NPLKQVL+VL EELPC+RYDGWGNLTPSGYFKF+L
Sbjct:  129 VVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAHSFERDGYKFDSGPSIFSGFTGPVPNPLKQVLNVLEEELPCIRYDGWGNLTPSGYFKFDL 224
[Close]
BLAST of mRNA_H-elongata_contig681.14439.1 vs. uniprot
Match: A0A0C2MA85_9CYAN (Carotene isomerase n=7 Tax=Scytonemataceae TaxID=1182 RepID=A0A0C2MA85_9CYAN)

HSP 1 Score: 153 bits (387), Expect = 3.120e-40
Identity = 68/99 (68.69%), Postives = 82/99 (82.83%), Query Frame = 0 
Query:  128 DVVVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAHTFERDGYKFDSGPSIFSGFT-GPVSNPLKQVLDVLGEELPCVRYDGWGNLTPSGYFKFNL 225
            D ++IG+GIGGL+CAALLA+YG DVTVCESH+IPGG AH FERDG+KFDSGPS++SG +  P +NPLKQVLD +GEELPCV YD WG   P GYF  ++
Sbjct:    8 DFIIIGSGIGGLSCAALLARYGFDVTVCESHSIPGGAAHAFERDGFKFDSGPSLYSGLSYSPSANPLKQVLDAIGEELPCVTYDTWGCYLPEGYFDTSV 106
[Close]
BLAST of mRNA_H-elongata_contig681.14439.1 vs. uniprot
Match: A0A355DP10_9CYAN (Carotene isomerase (Fragment) n=1 Tax=Cyanobacteria bacterium UBA11162 TaxID=2055781 RepID=A0A355DP10_9CYAN)

HSP 1 Score: 144 bits (364), Expect = 5.220e-40
Identity = 64/99 (64.65%), Postives = 82/99 (82.83%), Query Frame = 0 
Query:  128 DVVVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAHTFERDGYKFDSGPSIFSGFT-GPVSNPLKQVLDVLGEELPCVRYDGWGNLTPSGYFKFNL 225
            D++VIG+GIGGL+CAALLA+YG +VTVCESH+IPGG AH+FER+G+KFDSGPS++SG +  P +NPL+QVLD + EELPCV YD WG   P G F  ++
Sbjct:    5 DIIVIGSGIGGLSCAALLARYGFNVTVCESHSIPGGAAHSFERNGFKFDSGPSLYSGLSYRPSANPLRQVLDAIAEELPCVTYDTWGCCLPEGEFNTSV 103
[Close]
BLAST of mRNA_H-elongata_contig681.14439.1 vs. uniprot
Match: A0A846F7W3_9CYAN (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846F7W3_9CYAN)

HSP 1 Score: 151 bits (382), Expect = 1.660e-39
Identity = 69/95 (72.63%), Postives = 81/95 (85.26%), Query Frame = 0 
Query:  128 DVVVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAHTFERDGYKFDSGPSIFSGFT-GPVSNPLKQVLDVLGEELPCVRYDGWGNLTPSGYF 221
            DVVVIG+GIGGL+CAALLA+YG DVTVCESHTIPGG AHTFER+G+KFDSGPS++SG +  P +NPL+QVLD +GEE+PCV YD WG   P G F
Sbjct:    8 DVVVIGSGIGGLSCAALLARYGFDVTVCESHTIPGGAAHTFERNGFKFDSGPSLYSGLSYSPSTNPLRQVLDAIGEEIPCVTYDTWGCCLPEGDF 102
[Close]
BLAST of mRNA_H-elongata_contig681.14439.1 vs. uniprot
Match: A0A351L8I6_9CYAN (Carotene isomerase (Fragment) n=1 Tax=Cyanobacteria bacterium UBA11371 TaxID=2055770 RepID=A0A351L8I6_9CYAN)

HSP 1 Score: 145 bits (367), Expect = 4.470e-39
Identity = 66/99 (66.67%), Postives = 81/99 (81.82%), Query Frame = 0 
Query:  128 DVVVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAHTFERDGYKFDSGPSIFSGFT-GPVSNPLKQVLDVLGEELPCVRYDGWGNLTPSGYFKFNL 225
            DVVVIG+GIGGL+CAALLA+YG +VTVCESH+IPGG AH+FER+G+KFDSGPS++SG +  P  NPL+QVLD +GEELPC  YD WG   P G F  ++
Sbjct:    7 DVVVIGSGIGGLSCAALLARYGFNVTVCESHSIPGGAAHSFERNGFKFDSGPSLYSGLSYSPSPNPLRQVLDAIGEELPCANYDTWGCCLPEGDFDTSV 105
[Close]
BLAST of mRNA_H-elongata_contig681.14439.1 vs. uniprot
Match: A0A0C2L864_9CYAN (Carotene isomerase n=4 Tax=Nostocales TaxID=1161 RepID=A0A0C2L864_9CYAN)

HSP 1 Score: 148 bits (374), Expect = 2.330e-38
Identity = 67/99 (67.68%), Postives = 81/99 (81.82%), Query Frame = 0 
Query:  128 DVVVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAHTFERDGYKFDSGPSIFSGFT-GPVSNPLKQVLDVLGEELPCVRYDGWGNLTPSGYFKFNL 225
            DV+VIG+GIGGL+CAALLA+YG DV VCESH+IPGG AH FERDG+KFDSGPS++SG +  P +NPL+QVLD +GEELPCV YD WG   P G F  ++
Sbjct:    8 DVIVIGSGIGGLSCAALLARYGFDVRVCESHSIPGGAAHAFERDGFKFDSGPSLYSGLSYSPSANPLRQVLDAIGEELPCVTYDTWGCCLPEGDFDTSV 106
[Close]
BLAST of mRNA_H-elongata_contig681.14439.1 vs. uniprot
Match: A0A1Z4NQ35_9CYAN (Amine oxidase n=1 Tax=Calothrix sp. NIES-3974 TaxID=2005462 RepID=A0A1Z4NQ35_9CYAN)

HSP 1 Score: 147 bits (372), Expect = 3.110e-38
Identity = 64/98 (65.31%), Postives = 77/98 (78.57%), Query Frame = 0 
Query:  128 DVVVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAHTFERDGYKFDSGPSIFSGFTGPVSNPLKQVLDVLGEELPCVRYDGWGNLTPSGYFKFNL 225
            D++VIG+GIGGL+ AALL  YG  V VCESHTIPGG AH FERDGY+FDSGPS++SG + P  NPL+QVLD++G ELPCV YD WG   P GYF  ++
Sbjct:   11 DIIVIGSGIGGLSAAALLGYYGFRVVVCESHTIPGGAAHGFERDGYQFDSGPSLYSGLSAPSPNPLRQVLDIIGVELPCVNYDTWGCFVPEGYFPASV 108
[Close]
BLAST of mRNA_H-elongata_contig681.14439.1 vs. uniprot
Match: A0A6P0QE82_9CYAN (NAD(P)/FAD-dependent oxidoreductase n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=A0A6P0QE82_9CYAN)

HSP 1 Score: 148 bits (373), Expect = 3.200e-38
Identity = 66/99 (66.67%), Postives = 83/99 (83.84%), Query Frame = 0 
Query:  128 DVVVIGAGIGGLTCAALLAQYGLDVTVCESHTIPGGCAHTFERDGYKFDSGPSIFSGFT-GPVSNPLKQVLDVLGEELPCVRYDGWGNLTPSGYFKFNL 225
            DV+VIG+GIGGL+CAALLA+YG +VTVCESH+IPGG AHTFER+G+KFDSGPS++SG +  P +NPL+QVLD +GE+LPCV YD WG   P G F  ++
Sbjct:    7 DVIVIGSGIGGLSCAALLARYGFEVTVCESHSIPGGAAHTFERNGFKFDSGPSLYSGLSYSPSANPLRQVLDAIGEKLPCVNYDTWGCCLPEGDFDTSV 105
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig681.14439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D2AH49_9PHAE8.280e-5893.94Prolycopene isomerase-like2 n=2 Tax=Scytosiphonace... [more]
A0A2D2AH25_SCYLO1.170e-5793.94Prolycopene isomerase-like2 n=1 Tax=Scytosiphon lo... [more]
D7FIR6_ECTSI8.470e-5693.75Carotenoid isomerase-like protein n=1 Tax=Ectocarp... [more]
A0A0C2MA85_9CYAN3.120e-4068.69Carotene isomerase n=7 Tax=Scytonemataceae TaxID=1... [more]
A0A355DP10_9CYAN5.220e-4064.65Carotene isomerase (Fragment) n=1 Tax=Cyanobacteri... [more]
A0A846F7W3_9CYAN1.660e-3972.63NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Cyanot... [more]
A0A351L8I6_9CYAN4.470e-3966.67Carotene isomerase (Fragment) n=1 Tax=Cyanobacteri... [more]
A0A0C2L864_9CYAN2.330e-3867.68Carotene isomerase n=4 Tax=Nostocales TaxID=1161 R... [more]
A0A1Z4NQ35_9CYAN3.110e-3865.31Amine oxidase n=1 Tax=Calothrix sp. NIES-3974 TaxI... [more]
A0A6P0QE82_9CYAN3.200e-3866.67NAD(P)/FAD-dependent oxidoreductase n=2 Tax=unclas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 127..217
e-value: 3.5E-25
score: 91.2
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 128..219
NoneNo IPR availablePFAMPF13450NAD_binding_8coord: 131..188
e-value: 3.1E-18
score: 65.7
NoneNo IPR availablePANTHERPTHR46313FAMILY NOT NAMEDcoord: 116..223
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..225
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig681contigH-elongata_contig681:16637..19659 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig681.14439.1mRNA_H-elongata_contig681.14439.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig681 16584..19659 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig681.14439.1 ID=prot_H-elongata_contig681.14439.1|Name=mRNA_H-elongata_contig681.14439.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=225bp
MILSPRVERRRQLCAAGSIGALGSIIFGFLVGLSSGKLSFVPHSHQVAAR
TSFSSTNKNLHVQTTNGRAFLRKDTRAPYPSNISPARALRTAAEMAGNGE
GEGRASRPPPRPPLPPPSRRDAEEGVVDVVVIGAGIGGLTCAALLAQYGL
DVTVCESHTIPGGCAHTFERDGYKFDSGPSIFSGFTGPVSNPLKQVLDVL
GEELPCVRYDGWGNLTPSGYFKFNL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf