prot_H-elongata_contig6808.14437.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6808.14437.1
Unique Nameprot_H-elongata_contig6808.14437.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length288
Homology
BLAST of mRNA_H-elongata_contig6808.14437.1 vs. uniprot
Match: A0A6H5LB61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB61_9PHAE)

HSP 1 Score: 390 bits (1002), Expect = 2.830e-133
Identity = 199/277 (71.84%), Postives = 236/277 (85.20%), Query Frame = 0
Query:    8 DPDRYGAALISTALAVTGAAVFGAGINYMLGTEKAVQYVAGYIVEMSLSVDNLFVFLLLFKFFKVPFESQNRVLSYGIFGAVVMRAIFIALGETAMSIFRPVLLGFAAILFFSSYKLLSEGESDEVEDLRENWIVSVTSNTLDATDSYDGNKFFTSVNGVQRATPLLLVLVCVELSDVIFAIDSIPAVFAVTKDPFIVYTSNIWAIINLRSLYTILSSAVDDLQYLRPAVAVVLGFVGAKIGGEFLGYEIPTDISLVIIVGLLGVGIAASLAERGDE 284
            DPDRY AA+ +TA A  GA  FGAG+N  LG +KA+Q+ AGY+VEMSLSVDNLFVFLLLFKFFKVPF++QNRVL+YGI GAVVMRAIFI LGE  MS+F P+LLGFA IL +SSY LLSE E D  EDL +N +++  S+TLDAT+SYDG+KFFT V+GV+RATPLLLVLVCVELSD++FA+DSIPAVFAVTKDPFIVYTSNIWAI+NLRSL+T+L+SAV+DL YLRPAVA VLGFVG KIGGEF GY + T++SL II G+L  G+AASL   G++
Sbjct:   73 DPDRYVAAIATTAAATIGAIAFGAGVNEALGIDKALQFFAGYVVEMSLSVDNLFVFLLLFKFFKVPFDAQNRVLTYGIIGAVVMRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYNVSTELSLEIITGVLAAGVAASLILPGEK 349          
BLAST of mRNA_H-elongata_contig6808.14437.1 vs. uniprot
Match: A0A835YKR2_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR2_9STRA)

HSP 1 Score: 335 bits (858), Expect = 2.720e-111
Identity = 178/285 (62.46%), Postives = 223/285 (78.25%), Query Frame = 0
Query:    1 MKVESAPDPDRYGAALISTALAVTGAAVFGAGINYMLGTEKAVQYVAGYIVEMSLSVDNLFVFLLLFKFFKVPFESQNRVLSYGIFGAVVMRAIFIALGETAMSIFRPVLLGFAAILFFSSYKLLSEGESDEVEDLRENWIVSVTSNTLDATDSYDGNKFFTSVNGVQRATPLLLVLVCVELSDVIFAIDSIPAVFAVTKDPFIVYTSNIWAIINLRSLYTILSSAVDDLQYLRPAVAVVLGFVGAKIGGEFLGYEIPTDISLVIIVGLLGVGIAASLAERGDEK 285
            M  +  PDPDRY  A+ ++ +++  AA FGAGI+ + G+E AV Y AGY+VE SLSVDNLFVFLLLF++F VP   Q RVL +GI GAV++R +FIALGE A+  F+PVLLGFAAIL  S+YKL +E E  E  DL +N +V  +S  L ATD YDG+KFFT V+GV+RATPLLLVLVCVELSD++FA+DSIPAVF  T+DPF+VYTSNI+AI+NLRSLYT+LS+AV DL+YLRPAVA VL FVGAK+  E+ GYE+ T +SL +I  LLG G+A SL  +GDE+
Sbjct:   72 MPRDETPDPDRYKVAVRNSLISIAAAAAFGAGISVVQGSEAAVGYFAGYVVEQSLSVDNLFVFLLLFEYFNVPISYQQRVLRWGIVGAVILRGVFIALGEAALESFQPVLLGFAAILMVSAYKLFTEEEGGEA-DLTDNQVVQFSSKILKATDQYDGDKFFTMVDGVRRATPLLLVLVCVELSDLVFAVDSIPAVFGCTRDPFLVYTSNIFAIVNLRSLYTVLSNAVGDLEYLRPAVAGVLAFVGAKLAAEYFGYEVDTLLSLGVISTLLGGGVALSLL-KGDEE 354          
BLAST of mRNA_H-elongata_contig6808.14437.1 vs. uniprot
Match: A0A835YPV1_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV1_9STRA)

HSP 1 Score: 328 bits (841), Expect = 1.220e-109
Identity = 174/283 (61.48%), Postives = 217/283 (76.68%), Query Frame = 0
Query:    3 VESAPDPDRYGAALISTALAVTGAAVFGAGINYMLGTEKAVQYVAGYIVEMSLSVDNLFVFLLLFKFFKVPFESQNRVLSYGIFGAVVMRAIFIALGETAMSIFRPVLLGFAAILFFSSYKLLSEGESDEVEDLRENWIVSVTSNTLDATDSYDGNKFFTSVNGVQRATPLLLVLVCVELSDVIFAIDSIPAVFAVTKDPFIVYTSNIWAIINLRSLYTILSSAVDDLQYLRPAVAVVLGFVGAKIGGEFLGYEIPTDISLVIIVGLLGVGIAASLAERGDEK 285
            +E  PDP+RY  AL +T L++ GAA+FGAGI Y+ GTE A++Y AGYIVE SLSVDNLFVFLLLF++F VP   Q RVL +GI GAV++R IF+ALG+ A+  F+PVLL FA IL  SSYKLL+EG   E E L  N IV V+   L AT+ YDG++FFT V+G++RATPLLLVLVCVE SD++FA+DSIPAVF VTKDP IVY+SNI+AI+NLRSLYT+LS+AV DL YLRPAVA+VL FVG K+G E+    + T +SL II  +L  G+  SL ER + +
Sbjct:    5 LEEPPDPNRYATALRNTLLSIAGAALFGAGITYVKGTELALEYFAGYIVEQSLSVDNLFVFLLLFEYFSVPVAYQGRVLQWGIIGAVILRGIFVALGQAALESFQPVLLIFAGILLVSSYKLLTEGGDGEEESLHNNKIVQVSKRLLRATEEYDGDRFFTMVDGMRRATPLLLVLVCVEASDLVFAVDSIPAVFGVTKDPLIVYSSNIFAILNLRSLYTVLSTAVGDLVYLRPAVALVLAFVGLKLGAEYFSVTVDTVLSLGIISTILAGGVGLSLYERRNSE 287          
BLAST of mRNA_H-elongata_contig6808.14437.1 vs. uniprot
Match: A0A7S2V8N4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N4_9STRA)

HSP 1 Score: 307 bits (786), Expect = 3.200e-100
Identity = 158/270 (58.52%), Postives = 210/270 (77.78%), Query Frame = 0
Query:   15 ALISTALAVTGAAVFGAGINYMLGTEKAVQYVAGYIVEMSLSVDNLFVFLLLFKFFKVPFESQNRVLSYGIFGAVVMRAIFIALGETAMSIFRPVLLGFAAILFFSSYKLLSE---GESDEVEDLRENWIVSVTSNTLDATDSYDGNKFFTSVNGVQRATPLLLVLVCVELSDVIFAIDSIPAVFAVTKDPFIVYTSNIWAIINLRSLYTILSSAVDDLQYLRPAVAVVLGFVGAKIGGEFLGYEIPTDISLVIIVGLLGVGIAASLAER 281
            AL  T+LAV  AA+FGAGI +  G E  +++ AGY+VE SLSVDNLFVFLLLFK+F+VP   +N+VL++GIFGA+++R I I +G  A+ +F+P+ L FAA+L +SSYK+L+E   GE +E EDL +N I+ + S  L  +D YDG KFFT V+GV+ ATPLLL LVCVELSD++FA+DS+PAVF VTKDPFIVYTSNI+AI+ LRSLYT+LS AV +L YL+PAV +VLGF+G+K+G E+ GYEI T +SL ++  LLG G+  S+  +
Sbjct:  101 ALKQTSLAVVSAAMFGAGIFWFKGVESGLEFAAGYLVEQSLSVDNLFVFLLLFKYFQVPKCYENQVLNWGIFGALLLRGIMIGIGVEAVELFQPIFLVFAAVLAYSSYKILAEWVTGEGEEEEDLEDNAIIKLASKVLTVSDEYDGGKFFTVVDGVKVATPLLLCLVCVELSDIVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLSKAVSELDYLQPAVGIVLGFIGSKLGLEYYGYEISTGVSLGVVAALLGGGVGLSVLTK 370          
BLAST of mRNA_H-elongata_contig6808.14437.1 vs. uniprot
Match: A4S7T9_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7T9_OSTLU)

HSP 1 Score: 294 bits (752), Expect = 2.340e-96
Identity = 156/271 (57.56%), Postives = 208/271 (76.75%), Query Frame = 0
Query:   15 ALISTALAVTGAAVFGAGINYMLGTEKAVQYVAGYIVEMSLSVDNLFVFLLLFKFFKVPFESQNRVLSYGIFGAVVMRAIFIALGETAMSIFRPVLLGFAAILFFSSYKLLSEGESDEVEDLRENWIVSVTSNTLDATDSYDGNKFFTSVNGVQRATPLLLVLVCVELSDVIFAIDSIPAVFAVTKDPFIVYTSNIWAIINLRSLYTILSSAVDDLQYLRPAVAVVLGFVGAKIGGEFLGYEIPTDISLVIIVGLLGVGIAASLAERGDEK 285
            A+++  L V+ A  FGAGI  + G +KA +Y AGY++E SLSVDNLFVF+LLF++FKVP E Q RVL+YGI GA+VMRA+ +  G   +  F+P+LL FA IL FSSYKLL+EGE +E ED+ +N IV    N L+ ++ YDG+ FFT  NGV+ ATPLLLVL  VE+SDV+FA+DSIPAVF VTKDPFIVYTSN++AI++LR LYT++S AV +L+YL+ AVA+VLGF+GAK+  E+ G E+PT+ SL ++V +LG G+ ASL    ++K
Sbjct:   12 AIVAACLGVSCA--FGAGIGAVEGADKASEYFAGYLLEQSLSVDNLFVFVLLFEYFKVPPERQTRVLNYGIVGALVMRAVMVGAGVELIENFQPILLVFAGILIFSSYKLLAEGEEEE-EDMGDNAIVKFVGNFLEVSEDYDGDNFFTVQNGVKMATPLLLVLAVVEISDVVFAVDSIPAVFGVTKDPFIVYTSNLFAILSLRQLYTLISKAVGELKYLQTAVALVLGFIGAKMIVEYAGVEVPTEASLAVVVTMLGGGVGASLMLPSEDK 279          
BLAST of mRNA_H-elongata_contig6808.14437.1 vs. uniprot
Match: A0A096PAW2_OSTTA (Integral membrane protein TerC,riboswitch-linked n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PAW2_OSTTA)

HSP 1 Score: 291 bits (746), Expect = 1.780e-95
Identity = 150/257 (58.37%), Postives = 198/257 (77.04%), Query Frame = 0
Query:   29 FGAGINYMLGTEKAVQYVAGYIVEMSLSVDNLFVFLLLFKFFKVPFESQNRVLSYGIFGAVVMRAIFIALGETAMSIFRPVLLGFAAILFFSSYKLLSEGESDEVEDLRENWIVSVTSNTLDATDSYDGNKFFTSVNGVQRATPLLLVLVCVELSDVIFAIDSIPAVFAVTKDPFIVYTSNIWAIINLRSLYTILSSAVDDLQYLRPAVAVVLGFVGAKIGGEFLGYEIPTDISLVIIVGLLGVGIAASLAERGDEK 285
            FGA I    G++ A +Y AGY++E SLSVDNLFVF+LLF++F+VP   Q  VL+YGIFGA++MRA+ I  G   +  F+P+LL FA IL FSSYKL+S+G+SDE ED+ +N +V   S   D +D YDG+ FFT  NGV+ ATPLLLVL  VE+SDV+FA+DSIPAVF VTKDPFIVYTSN++AI++LR LYT++S+AV +L+YL+ AVA+VLGF+G+K+  E+ G EIPT++SL ++V LL  G+AASL    D K
Sbjct:   22 FGAAIGATSGSDAASEYFAGYLLEQSLSVDNLFVFVLLFEYFQVPPARQKVVLNYGIFGALIMRAVMIVAGVELIENFKPILLVFAGILIFSSYKLISQGDSDEEEDMADNAVVKFCSKLFDVSDDYDGDNFFTVQNGVKMATPLLLVLAVVEISDVVFAVDSIPAVFGVTKDPFIVYTSNLFAILSLRQLYTLISTAVGELKYLQTAVALVLGFIGSKMVVEYTGVEIPTELSLAVVVTLLSGGVAASLYLPDDSK 278          
BLAST of mRNA_H-elongata_contig6808.14437.1 vs. uniprot
Match: C1EER2_MICCC (Uncharacterized protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EER2_MICCC)

HSP 1 Score: 288 bits (737), Expect = 2.260e-94
Identity = 151/258 (58.53%), Postives = 199/258 (77.13%), Query Frame = 0
Query:   25 GAAV-FGAGINYMLGTEKAVQYVAGYIVEMSLSVDNLFVFLLLFKFFKVPFESQNRVLSYGIFGAVVMRAIFIALGETAMSIFRPVLLGFAAILFFSSYKLLSEGESDEVEDLRENWIVSVTSNTLDATDSYDGNKFFTSVNGVQRATPLLLVLVCVELSDVIFAIDSIPAVFAVTKDPFIVYTSNIWAIINLRSLYTILSSAVDDLQYLRPAVAVVLGFVGAKIGGEFLGYEIPTDISLVIIVGLLGVGIAASLAER 281
            GAAV FG G+  ++G EKA ++ AGY++E SLSVDNLFVF+L+F +FKVP  SQ RVL+YGI+GA+VMRA  I  G  A++ F+P+LL FA +L FSSYKL++EGE +E ED+ EN IV   SN L  +  YDG  FFT+ NG + ATPLLL L  +ELSDV+FA+DSIPAVF +T+DPFIVY+SNI+AI+ LRSL+  +++ V +L+YL+ AVA VLGFVG K+  EF G EIPT+ SL ++VG+LG G+A SLA++
Sbjct:    6 GAAVAFGLGVGAVMGAEKAEEFFAGYLLEQSLSVDNLFVFVLVFDYFKVPLASQPRVLNYGIWGAMVMRAAMIIAGYEAVTNFKPILLVFAGVLIFSSYKLIAEGEEEEEEDMSENAIVKFCSNLLPVSKDYDGENFFTTENGAKIATPLLLCLCVIELSDVVFAVDSIPAVFGITEDPFIVYSSNIFAIMGLRSLFAFVATMVAELEYLQTAVAAVLGFVGCKMVVEFGGVEIPTEASLAVVVGMLGAGVALSLAKK 263          
BLAST of mRNA_H-elongata_contig6808.14437.1 vs. uniprot
Match: A0A1Y1IHD0_KLENI (Integral membrane protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHD0_KLENI)

HSP 1 Score: 294 bits (752), Expect = 3.620e-94
Identity = 159/271 (58.67%), Postives = 207/271 (76.38%), Query Frame = 0
Query:   15 ALISTALAVTGAAVFGAGINYMLGTEKAVQYVAGYIVEMSLSVDNLFVFLLLFKFFKVPFESQNRVLSYGIFGAVVMRAIFIALGETAMSIFRPVLLGFAAILFFSSYKLLSEGESDEVEDLRENWIVSVTSNTLDATDSYDGNKFFTSVNGVQRATPLLLVLVCVELSDVIFAIDSIPAVFAVTKDPFIVYTSNIWAIINLRSLYTILSSAVDDLQYLRPAVAVVLGFVGAKIGGEFLGYEIPTDISLVIIVGLLGVGIAASLAERGDEK 285
            ALI+ A  V  AAVFGAG+  + G  KA +Y AGYI+E SLSVDNLFVF+L+FK+F+VP + QNRVLS+GI GAVV RA+ I LG   +  F  V L FA IL FSS+KLL +G+ DE EDL +N+IV   S  +++TD YDGN FFT V+GV+RATPLLL L  VELSD+ FA+DSIPAVF VT DPFIV++SNI+AII LRSLYT+++  + DL++L+P++A+VLGFVGAK+  EF G ++PT+ SL +++G+LG GI  SL +  +EK
Sbjct:  173 ALITVAFWVAAAAVFGAGVGIVQGPGKASEYFAGYILEQSLSVDNLFVFVLIFKYFQVPLDYQNRVLSWGIAGAVVFRALLIGLGAATVQEFTAVNLVFAGILLFSSFKLL-QGDDDEDEDLSDNYIVKTCSKLINSTDYYDGNNFFTVVDGVKRATPLLLTLAVVELSDIAFAVDSIPAVFGVTHDPFIVFSSNIFAIICLRSLYTLVAGVMKDLRFLQPSIAIVLGFVGAKLIAEFAGLQVPTESSLAVVIGVLGSGIFLSL-KFPEEK 441          
BLAST of mRNA_H-elongata_contig6808.14437.1 vs. uniprot
Match: A0A7S0HY79_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HY79_9CRYP)

HSP 1 Score: 288 bits (738), Expect = 5.100e-93
Identity = 156/271 (57.56%), Postives = 202/271 (74.54%), Query Frame = 0
Query:   12 YGAALISTALAVTGAAVFGAGINYMLGTEKAVQYVAGYIVEMSLSVDNLFVFLLLFKFFKVPFESQNRVLSYGIFGAVVMRAIFIALGETAMSIFRPVLLGFAAILFFSSYKLLSEGESDEVE-DLRENWIVSVTSNTLDATDSYDGNKFFTSVNGVQRATPLLLVLVCVELSDVIFAIDSIPAVFAVTKDPFIVYTSNIWAIINLRSLYTILSSAVDDLQYLRPAVAVVLGFVGAKIGGEFLGYEIPTDISLVIIVGLLGVGIAASLAER 281
            Y  AL  TA+AV+ A+ FG GI   LG +KA++Y  GY++E SLSVDNLFVFLLLF++FKVP   Q +VLSYGI+GAVVMRA FI+ G  A+  FR VLL FA +L +SS+K+LS GE +E   D+ EN IV   S  + AT  YDG+KFFT V+GV++ATPL LVL+CVE SDV+FA+DSIPAVF VT+DP IV TSNI+AI++LR+LY +L+    DL+YL  AV  VLGFVG K+ GE+ G+E+P   SL +++GLL  G+ AS+ E+
Sbjct:   47 YKTALRDTAIAVSLASAFGVGIWNFLGADKALEYFTGYLLEESLSVDNLFVFLLLFEYFKVPQYQQKKVLSYGIWGAVVMRAAFISAGLVAIQQFRGVLLVFAGLLMYSSFKMLSGGEEEEENADVSENSIVKFASKLVQATPEYDGDKFFTIVDGVKKATPLFLVLLCVEFSDVMFAVDSIPAVFGVTEDPLIVLTSNIFAIMSLRALYQVLAQLAKDLKYLETAVGAVLGFVGLKLVGEYFGFELPEQASLSVVIGLLTAGVGASIYEK 317          
BLAST of mRNA_H-elongata_contig6808.14437.1 vs. uniprot
Match: A0A7S0MZU7_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MZU7_9CRYP)

HSP 1 Score: 290 bits (741), Expect = 9.360e-93
Identity = 152/274 (55.47%), Postives = 202/274 (73.72%), Query Frame = 0
Query:   12 YGAALISTALAVTGAAVFGAGINYMLGTEKAVQYVAGYIVEMSLSVDNLFVFLLLFKFFKVPFESQNRVLSYGIFGAVVMRAIFIALGETAMSIFRPVLLGFAAILFFSSYKLLSEGESDEVEDLRENWIVSVTSNTLDATDSYDGNKFFTSVNGVQRATPLLLVLVCVELSDVIFAIDSIPAVFAVTKDPFIVYTSNIWAIINLRSLYTILSSAVDDLQYLRPAVAVVLGFVGAKIGGEFLGYEIPTDISLVIIVGLLGVGIAASLAERGDEK 285
            Y +A+ +T LAV+ A  FG G+  +LG  KA+++ +GY+VE SLSVDNLFVF+LLF++FKV    Q RVL +GI GA V+R  FIA G  A+  F+ VLL FA  L FSS+K+L+ GE +E EDL +N +V + S  + +T  YDG+KFFT V+GV+RATPLLLVLVCVELSDV+FA+DSIPAVF +T+DPFIV TSN++AI+ LR+L+ I+S  + +L+YL PAV +VLGFVG K+ G F G E+P   SL +I+ LLG G+  S   R DE+
Sbjct:  103 YQSAIRNTGLAVSAAVAFGIGVGAVLGVPKAIEFFSGYVVEESLSVDNLFVFILLFEYFKVSQALQQRVLKWGIIGAAVLRGAFIAAGLVAIESFKGVLLVFAGFLIFSSFKILTGGEEEEEEDLSQNSVVKLASRLVQSTTEYDGDKFFTVVDGVRRATPLLLVLVCVELSDVMFAVDSIPAVFGITEDPFIVLTSNLFAILGLRALFQIISKVMKNLEYLEPAVGLVLGFVGLKMVGGFFGVEVPPAESLAVILSLLGGGVGLSYLNRHDEE 376          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6808.14437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LB61_9PHAE2.830e-13371.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YKR2_9STRA2.720e-11162.46Integral membrane protein TerC family-domain-conta... [more]
A0A835YPV1_9STRA1.220e-10961.48Integral membrane protein TerC family-domain-conta... [more]
A0A7S2V8N4_9STRA3.200e-10058.52Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A4S7T9_OSTLU2.340e-9657.56Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
A0A096PAW2_OSTTA1.780e-9558.37Integral membrane protein TerC,riboswitch-linked n... [more]
C1EER2_MICCC2.260e-9458.53Uncharacterized protein (Fragment) n=1 Tax=Micromo... [more]
A0A1Y1IHD0_KLENI3.620e-9458.67Integral membrane protein n=1 Tax=Klebsormidium ni... [more]
A0A7S0HY79_9CRYP5.100e-9357.56Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S0MZU7_9CRYP9.360e-9355.47Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022369Integral membrane protein TerC, riboswitch-linkedTIGRFAMTIGR03718TIGR03718coord: 15..280
e-value: 4.6E-90
score: 300.1
IPR022369Integral membrane protein TerC, riboswitch-linkedPANTHERPTHR30238:SF0THYLAKOID MEMBRANE PROTEIN TERC, CHLOROPLASTICcoord: 11..283
IPR005496Integral membrane protein TerCPFAMPF03741TerCcoord: 47..248
e-value: 1.3E-46
score: 158.5
NoneNo IPR availablePANTHERPTHR30238MEMBRANE BOUND PREDICTED REDOX MODULATORcoord: 11..283
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 126..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 280..287
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 100..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 261..279
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 203..220
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 198..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 221..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..249
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..99
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 69..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 250..260
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..68
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 257..279
NoneNo IPR availableTMHMMTMhelixcoord: 80..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6808contigH-elongata_contig6808:8004..9984 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6808.14437.1mRNA_H-elongata_contig6808.14437.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6808 8004..9987 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6808.14437.1 ID=prot_H-elongata_contig6808.14437.1|Name=mRNA_H-elongata_contig6808.14437.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=288bp
MKVESAPDPDRYGAALISTALAVTGAAVFGAGINYMLGTEKAVQYVAGYI
VEMSLSVDNLFVFLLLFKFFKVPFESQNRVLSYGIFGAVVMRAIFIALGE
TAMSIFRPVLLGFAAILFFSSYKLLSEGESDEVEDLRENWIVSVTSNTLD
ATDSYDGNKFFTSVNGVQRATPLLLVLVCVELSDVIFAIDSIPAVFAVTK
DPFIVYTSNIWAIINLRSLYTILSSAVDDLQYLRPAVAVVLGFVGAKIGG
EFLGYEIPTDISLVIIVGLLGVGIAASLAERGDEKTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022369Integral_membrane_TerC_rswitch
IPR005496Integral_membrane_TerC