prot_H-elongata_contig67991.14419.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67991.14419.1
Unique Nameprot_H-elongata_contig67991.14419.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
BLAST of mRNA_H-elongata_contig67991.14419.1 vs. uniprot
Match: F8UWN5_9PHAE (NADH dehydrogenase subunit 11 n=73 Tax=Phaeophyceae TaxID=2870 RepID=F8UWN5_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.390e-23
Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    1 NISINELLIWVKEGSTVIQACQTAGVNIPIFCYHDKLFIACSCRMCLVE 49
            NISINELLIWVK+GSTVIQACQ AG NIP FCYHDKLFIA +CRMCLVE
Sbjct:    3 NISINELLIWVKKGSTVIQACQAAGANIPRFCYHDKLFIAGNCRMCLVE 51          
BLAST of mRNA_H-elongata_contig67991.14419.1 vs. uniprot
Match: A0A2R4QQ95_9PHAE (NADH dehydrogenase subunit 11 n=6 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ95_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.920e-23
Identity = 43/49 (87.76%), Postives = 46/49 (93.88%), Query Frame = 0
Query:    1 NISINELLIWVKEGSTVIQACQTAGVNIPIFCYHDKLFIACSCRMCLVE 49
            NISINELLIWVK+GSTVIQACQ+AGV IP FCYHDKLFIA +CRMCLVE
Sbjct:    3 NISINELLIWVKKGSTVIQACQSAGVKIPRFCYHDKLFIAGNCRMCLVE 51          
BLAST of mRNA_H-elongata_contig67991.14419.1 vs. uniprot
Match: A0A0G2RLB7_TUROR (NADH dehydrogenase subunit 11 n=24 Tax=Sargassaceae TaxID=3014 RepID=A0A0G2RLB7_TUROR)

HSP 1 Score: 93.2 bits (230), Expect = 2.060e-22
Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    1 NISINELLIWVKEGSTVIQACQTAGVNIPIFCYHDKLFIACSCRMCLVE 49
            NI+INELLIWVK+GSTVIQAC+ AGV IP FCYHDKLFIA +CRMCLVE
Sbjct:    3 NITINELLIWVKKGSTVIQACEAAGVKIPRFCYHDKLFIAGNCRMCLVE 51          
BLAST of mRNA_H-elongata_contig67991.14419.1 vs. uniprot
Match: A0A8F0K0N1_9PHAE (NADH dehydrogenase subunit 11 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0K0N1_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 2.160e-22
Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0
Query:    1 NISINELLIWVKEGSTVIQACQTAGVNIPIFCYHDKLFIACSCRMCLVE 49
            NISINELL+WVK+GSTVIQACQ AG  IP FCYHDKLF+A +CRMCLVE
Sbjct:    3 NISINELLVWVKKGSTVIQACQAAGAKIPRFCYHDKLFVAGNCRMCLVE 51          
BLAST of mRNA_H-elongata_contig67991.14419.1 vs. uniprot
Match: E6ZET3_ECTSI (NADH dehydrogenase subunit 11 n=3 Tax=Ectocarpales TaxID=2877 RepID=E6ZET3_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 3.790e-20
Identity = 35/48 (72.92%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    2 ISINELLIWVKEGSTVIQACQTAGVNIPIFCYHDKLFIACSCRMCLVE 49
            ISIN+L++WV++GSTVIQACQ AG  +P FCYHDKLF+A +CRMCLVE
Sbjct:    4 ISINDLIVWVRKGSTVIQACQAAGAQVPRFCYHDKLFVAGNCRMCLVE 51          
BLAST of mRNA_H-elongata_contig67991.14419.1 vs. uniprot
Match: Q9XNR7_PYLLI (NADH dehydrogenase subunit 11 n=6 Tax=Ectocarpales TaxID=2877 RepID=Q9XNR7_PYLLI)

HSP 1 Score: 87.4 bits (215), Expect = 4.030e-20
Identity = 36/48 (75.00%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    2 ISINELLIWVKEGSTVIQACQTAGVNIPIFCYHDKLFIACSCRMCLVE 49
            IS+N+L+IW+K+GSTVIQACQ AG  +P FCYHDKLFIA +CRMCLVE
Sbjct:    4 ISVNDLVIWLKKGSTVIQACQVAGAQVPRFCYHDKLFIAGNCRMCLVE 51          
BLAST of mRNA_H-elongata_contig67991.14419.1 vs. uniprot
Match: A0A8E8U4G1_9PHAE (Nad11 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8U4G1_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 4.740e-18
Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 NISINELLIWVKEGSTVIQACQTAGVNIPIFCYHDKLFIACSCRMCLVE 49
            +I INE+++WVK GSTVIQACQ  G  IP FCYHDKL IA +CRMCLVE
Sbjct:    3 SIHINEIIVWVKRGSTVIQACQAVGAIIPRFCYHDKLSIAGNCRMCLVE 51          
BLAST of mRNA_H-elongata_contig67991.14419.1 vs. uniprot
Match: Q2TUA0_DICDH (NADH dehydrogenase subunit 11 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUA0_DICDH)

HSP 1 Score: 79.0 bits (193), Expect = 6.430e-17
Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    2 ISINELLIWVKEGSTVIQACQTAGVNIPIFCYHDKLFIACSCRMCLVE 49
            I+IN L++WVK GSTV+QAC+ AG  +P FCYH+KL IA +CRMCLVE
Sbjct:    3 ITINNLVVWVKGGSTVLQACEAAGEEVPRFCYHEKLLIAGNCRMCLVE 50          
BLAST of mRNA_H-elongata_contig67991.14419.1 vs. uniprot
Match: A0A4Y5T8Q6_9PHAE (NADH dehydrogenase subunit 11 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8Q6_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.280e-16
Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    2 ISINELLIWVKEGSTVIQACQTAGVNIPIFCYHDKLFIACSCRMCLVE 49
            I IN L++WVK+GSTV+QAC+  G  IP FCYH KLF+A +CRMCLVE
Sbjct:    3 IIINNLVVWVKKGSTVLQACEAVGEEIPRFCYHKKLFLAGNCRMCLVE 50          
BLAST of mRNA_H-elongata_contig67991.14419.1 vs. uniprot
Match: A0A8F0FDA4_9PHAE (NADH dehydrogenase subunit 11 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FDA4_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.830e-16
Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    2 ISINELLIWVKEGSTVIQACQTAGVNIPIFCYHDKLFIACSCRMCLVE 49
            I IN L+IWVK+GSTV+QAC+  G  IP FCYH KLFIA +CRMC VE
Sbjct:    3 IIINNLIIWVKKGSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVE 50          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67991.14419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F8UWN5_9PHAE1.390e-2387.76NADH dehydrogenase subunit 11 n=73 Tax=Phaeophycea... [more]
A0A2R4QQ95_9PHAE1.920e-2387.76NADH dehydrogenase subunit 11 n=6 Tax=Fucus TaxID=... [more]
A0A0G2RLB7_TUROR2.060e-2283.67NADH dehydrogenase subunit 11 n=24 Tax=Sargassacea... [more]
A0A8F0K0N1_9PHAE2.160e-2281.63NADH dehydrogenase subunit 11 n=1 Tax=Desmarestia ... [more]
E6ZET3_ECTSI3.790e-2072.92NADH dehydrogenase subunit 11 n=3 Tax=Ectocarpales... [more]
Q9XNR7_PYLLI4.030e-2075.00NADH dehydrogenase subunit 11 n=6 Tax=Ectocarpales... [more]
A0A8E8U4G1_9PHAE4.740e-1871.43Nad11 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID... [more]
Q2TUA0_DICDH6.430e-1766.67NADH dehydrogenase subunit 11 n=1 Tax=Dictyota dic... [more]
A0A4Y5T8Q6_9PHAE1.280e-1666.67NADH dehydrogenase subunit 11 n=1 Tax=Dictyopteris... [more]
A0A8F0FDA4_9PHAE1.830e-1668.75NADH dehydrogenase subunit 11 n=1 Tax=Protohalopte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13510Fer2_4coord: 2..49
e-value: 2.0E-8
score: 34.2
NoneNo IPR availableGENE3D3.10.20.740coord: 1..50
e-value: 3.6E-12
score: 48.1
NoneNo IPR availablePANTHERPTHR11615:SF216NADH-QUINONE OXIDOREDUCTASE SUBUNIT Gcoord: 2..50
NoneNo IPR availablePANTHERPTHR11615NITRATE, FROMATE, IRON DEHYDROGENASEcoord: 2..50
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 2..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67991contigH-elongata_contig67991:1580..1729 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67991.14419.1mRNA_H-elongata_contig67991.14419.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67991 1580..1729 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67991.14419.1 ID=prot_H-elongata_contig67991.14419.1|Name=mRNA_H-elongata_contig67991.14419.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
NISINELLIWVKEGSTVIQACQTAGVNIPIFCYHDKLFIACSCRMCLVEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf