prot_H-elongata_contig67991.14418.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67991.14418.1
Unique Nameprot_H-elongata_contig67991.14418.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length65
Homology
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: A0A2R4QQ95_9PHAE (NADH dehydrogenase subunit 11 n=6 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ95_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 4.980e-29
Identity = 49/59 (83.05%), Postives = 52/59 (88.14%), Query Frame = 0
Query:    1 MPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFI 59
            MPNMR++TNTAL RK QEF MELLLLHHPLDC VCDQGGECELQEQSFNYG+DRG  F 
Sbjct:   67 MPNMRIYTNTALVRKAQEFVMELLLLHHPLDCPVCDQGGECELQEQSFNYGSDRGRFFF 125          
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: A0A0G2RLB7_TUROR (NADH dehydrogenase subunit 11 n=24 Tax=Sargassaceae TaxID=3014 RepID=A0A0G2RLB7_TUROR)

HSP 1 Score: 108 bits (270), Expect = 3.800e-28
Identity = 48/59 (81.36%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 MPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFI 59
            MPNMR+FTNTAL  K QEF ME LLLHHPLDC VCDQGGECELQEQSFNYG+DRG  F 
Sbjct:   67 MPNMRIFTNTALVHKAQEFVMEFLLLHHPLDCPVCDQGGECELQEQSFNYGSDRGRFFF 125          
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: A0A8F0K0N1_9PHAE (NADH dehydrogenase subunit 11 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0K0N1_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 4.520e-27
Identity = 45/59 (76.27%), Postives = 52/59 (88.14%), Query Frame = 0
Query:    1 MPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFI 59
            MPN+++FTN+AL RK QEF MEL+LLHHPLDC VCDQGGECELQEQSFN+G+DRG  F 
Sbjct:   67 MPNLKIFTNSALVRKAQEFVMELMLLHHPLDCPVCDQGGECELQEQSFNFGSDRGRFFF 125          
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: E6ZET3_ECTSI (NADH dehydrogenase subunit 11 n=3 Tax=Ectocarpales TaxID=2877 RepID=E6ZET3_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.810e-26
Identity = 46/59 (77.97%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 MPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFI 59
            +PN+R+FTNTAL RK QE  MELLLLHHPLDC VCDQGGECELQEQSFNYG+DRG    
Sbjct:   67 LPNLRIFTNTALVRKAQESVMELLLLHHPLDCPVCDQGGECELQEQSFNYGSDRGRFLF 125          
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: F8UWN5_9PHAE (NADH dehydrogenase subunit 11 n=73 Tax=Phaeophyceae TaxID=2870 RepID=F8UWN5_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 7.390e-26
Identity = 45/59 (76.27%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 MPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFI 59
            +PN+R+FTNTAL RK QE  MELLLLHHPLDC VCDQGGECELQEQSFN+G+DRG    
Sbjct:   67 LPNLRIFTNTALVRKAQESVMELLLLHHPLDCPVCDQGGECELQEQSFNFGSDRGRFLF 125          
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: Q9XNR7_PYLLI (NADH dehydrogenase subunit 11 n=6 Tax=Ectocarpales TaxID=2877 RepID=Q9XNR7_PYLLI)

HSP 1 Score: 102 bits (255), Expect = 7.750e-26
Identity = 45/59 (76.27%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 MPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFI 59
            +P +R+FTNTAL RK QE  MELLLLHHPLDC VCDQGGECELQEQSFN+G+DRG  F 
Sbjct:   67 LPGLRIFTNTALVRKAQESVMELLLLHHPLDCPVCDQGGECELQEQSFNFGSDRGRFFF 125          
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: A0A8E8U4G1_9PHAE (Nad11 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8U4G1_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 6.620e-24
Identity = 41/59 (69.49%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 MPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFI 59
            +P +R+FT +AL RK QEF MEL+LL+HPLDC +CDQGGECELQEQSF+YG+DRG  F 
Sbjct:   67 LPGLRIFTTSALVRKAQEFVMELILLNHPLDCPICDQGGECELQEQSFHYGSDRGRFFF 125          
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: A0A4Y5T8Q6_9PHAE (NADH dehydrogenase subunit 11 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8Q6_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 2.000e-21
Identity = 38/59 (64.41%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 MPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFI 59
            +PNM +FTN+AL +K +E  ME LLL+HPLDC +CDQGGEC+LQEQSF++G+DRG  F 
Sbjct:   66 VPNMSIFTNSALVKKAREGVMEFLLLNHPLDCPICDQGGECDLQEQSFHFGSDRGRFFF 124          
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: Q2TUA0_DICDH (NADH dehydrogenase subunit 11 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUA0_DICDH)

HSP 1 Score: 88.2 bits (217), Expect = 3.160e-20
Identity = 36/59 (61.02%), Postives = 48/59 (81.36%), Query Frame = 0
Query:    1 MPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFI 59
            +PNM +FT +AL RK +E  ME +L++HPLDC +CDQGGEC+LQEQSF++G+DRG  F 
Sbjct:   66 IPNMSIFTESALVRKAREGVMEFILVNHPLDCPICDQGGECDLQEQSFHFGSDRGRFFF 124          
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: A0A8F0FDA4_9PHAE (NADH dehydrogenase subunit 11 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FDA4_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 9.060e-20
Identity = 35/59 (59.32%), Postives = 48/59 (81.36%), Query Frame = 0
Query:    1 MPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFI 59
            +PNM + TN++L RK +E  +E +LL+HPLDC VCDQGGEC+LQEQ+F++G+DRG  F 
Sbjct:   66 LPNMSILTNSSLVRKARESVLEFILLNHPLDCPVCDQGGECDLQEQNFHFGSDRGRFFF 124          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R4QQ95_9PHAE4.980e-2983.05NADH dehydrogenase subunit 11 n=6 Tax=Fucus TaxID=... [more]
A0A0G2RLB7_TUROR3.800e-2881.36NADH dehydrogenase subunit 11 n=24 Tax=Sargassacea... [more]
A0A8F0K0N1_9PHAE4.520e-2776.27NADH dehydrogenase subunit 11 n=1 Tax=Desmarestia ... [more]
E6ZET3_ECTSI1.810e-2677.97NADH dehydrogenase subunit 11 n=3 Tax=Ectocarpales... [more]
F8UWN5_9PHAE7.390e-2676.27NADH dehydrogenase subunit 11 n=73 Tax=Phaeophycea... [more]
Q9XNR7_PYLLI7.750e-2676.27NADH dehydrogenase subunit 11 n=6 Tax=Ectocarpales... [more]
A0A8E8U4G1_9PHAE6.620e-2469.49Nad11 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID... [more]
A0A4Y5T8Q6_9PHAE2.000e-2164.41NADH dehydrogenase subunit 11 n=1 Tax=Dictyopteris... [more]
Q2TUA0_DICDH3.160e-2061.02NADH dehydrogenase subunit 11 n=1 Tax=Dictyota dic... [more]
A0A8F0FDA4_9PHAE9.060e-2059.32NADH dehydrogenase subunit 11 n=1 Tax=Protohalopte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingSMARTSM00929NADH_G_4Fe_4S_3_2coord: 17..57
e-value: 4.7E-12
score: 56.0
IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingPFAMPF10588NADH-G_4Fe-4S_3coord: 20..53
e-value: 5.3E-15
score: 54.7
IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingPROSITEPS518394FE4S_HC3coord: 12..51
score: 13.828
NoneNo IPR availableGENE3D3.10.20.740coord: 1..58
e-value: 7.3E-11
score: 43.8
NoneNo IPR availableSUPERFAMILY548624Fe-4S ferredoxinscoord: 10..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67991contigH-elongata_contig67991:314..508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67991.14418.1mRNA_H-elongata_contig67991.14418.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67991 104..700 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67991.14418.1 ID=prot_H-elongata_contig67991.14418.1|Name=mRNA_H-elongata_contig67991.14418.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp
MPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNY
GTDRGNLFICLIFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019574NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd