mRNA_H-elongata_contig67991.14418.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig67991.14418.1
Unique NamemRNA_H-elongata_contig67991.14418.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: A0A2R4QQ95_9PHAE (NADH dehydrogenase subunit 11 n=6 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ95_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 1.950e-71
Identity = 122/211 (57.82%), Postives = 138/211 (65.40%), Query Frame = 1 
Query:    1 NISTNELLILVKKGSTVIQACQTAGVNISRFCYHDKLFIAGSCRMCSVEVANAPKPQSS*ALPFMPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFICLIFR*HILEKPYKNGF--EALCCMYSMC*VYPKKM***FYSYV*SWRKLRNWYV*GNYT*NGSF----------WGVIELCPVSWCS 597
            NIS NELLI VKKGSTVIQACQ+AGV I RFCYHDKLFIAG+CRMC VEV NAPKPQ+S ALPFMPNMR++TNTAL RK QEF MELLLLHHPLDC VCDQGGECELQEQSFNYG+DRG  F          +K   + F    +  +   C V  + +    Y+Y     +       G  +  G F           GVIELCPV+W S
Sbjct:    3 NISINELLIWVKKGSTVIQACQSAGVKIPRFCYHDKLFIAGNCRMCLVEVGNAPKPQASCALPFMPNMRIYTNTALVRKAQEFVMELLLLHHPLDCPVCDQGGECELQEQSFNYGSDRGRFFF--------FKKSLGDTFWGSLIKTVLRRCIVCTRCV---RYTYQIGGSEAIGTSNRGGSSEIGMFKESVLKTETSGGVIELCPVAWHS 202
[Close]
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: A0A8F0K0N1_9PHAE (NADH dehydrogenase subunit 11 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0K0N1_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 5.250e-69
Identity = 113/212 (53.30%), Postives = 139/212 (65.57%), Query Frame = 1 
Query:    1 NISTNELLILVKKGSTVIQACQTAGVNISRFCYHDKLFIAGSCRMCSVEVANAPKPQSS*ALPFMPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFICLIFR*HILEKPYKNGFEAL---CCMYSMC*VYPKKM***FYSYV*SWRKLRNWYV*GNYT*NGSF----------WGVIELCPVSWCS 597
            NIS NELL+ VKKGSTVIQACQ AG  I RFCYHDKLF+AG+CRMC VEV NAPKPQ+S ALPFMPN+++FTN+AL RK QEF MEL+LLHHPLDC VCDQGGECELQEQSFN+G+DRG  F    F+  + +  + +  + +   C + + C  Y  ++                    G+++  G F           GVIELCPV WC+
Sbjct:    3 NISINELLVWVKKGSTVIQACQAAGAKIPRFCYHDKLFVAGNCRMCLVEVNNAPKPQASCALPFMPNLKIFTNSALVRKAQEFVMELMLLHHPLDCPVCDQGGECELQEQSFNFGSDRGRFFF---FKNSLGDTFWGSLIKTVLRRCIVCTRCVRYTSQI---------GGNDSVGTSNRGSHSEIGMFKENILKTETSGGVIELCPVCWCN 202
[Close]
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: F8UWN5_9PHAE (NADH dehydrogenase subunit 11 n=73 Tax=Phaeophyceae TaxID=2870 RepID=F8UWN5_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 1.090e-68
Identity = 116/210 (55.24%), Postives = 137/210 (65.24%), Query Frame = 1 
Query:    1 NISTNELLILVKKGSTVIQACQTAGVNISRFCYHDKLFIAGSCRMCSVEVANAPKPQSS*ALPFMPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFICLIFR*HILEKPYKNGFEAL---CCMYSMC*VYPKKM***FYSYV*SWRKLRNWYV*GNYT*NGSF----------WGVIELCPVSW 591
            NIS NELLI VKKGSTVIQACQ AG NI RFCYHDKLFIAG+CRMC VEV+N+PKPQ+S ALPF+PN+R+FTNTAL RK QE  MELLLLHHPLDC VCDQGGECELQEQSFN+G+DRG     L F+  + +  +    + +   C + + C  Y  ++                    G ++  G F           GVIELCPVSW
Sbjct:    3 NISINELLIWVKKGSTVIQACQAAGANIPRFCYHDKLFIAGNCRMCLVEVSNSPKPQASCALPFLPNLRIFTNTALVRKAQESVMELLLLHHPLDCPVCDQGGECELQEQSFNFGSDRGRF---LFFKNSLSDTFWGGLIKTVLRRCIVCTRCVRYTHQI---------GGNDSLGTSNRGGHSEIGMFKESVLKSETSGGVIELCPVSW 200
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BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: A0A0G2RLB7_TUROR (NADH dehydrogenase subunit 11 n=24 Tax=Sargassaceae TaxID=3014 RepID=A0A0G2RLB7_TUROR)

HSP 1 Score: 216 bits (551), Expect = 1.990e-68
Identity = 116/206 (56.31%), Postives = 139/206 (67.48%), Query Frame = 1 
Query:    1 NISTNELLILVKKGSTVIQACQTAGVNISRFCYHDKLFIAGSCRMCSVEVANAPKPQSS*ALPFMPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFICLIFR*HILEKPYKNGFEAL---CCMYSMC*VYPKKM***FYSYV*SWRKLRNWYV*GNYT*N----GSFWGVIELCPVSWCS 597
            NI+ NELLI VKKGSTVIQAC+ AGV I RFCYHDKLFIAG+CRMC VEV N+PKPQ+S ALPFMPNMR+FTNTAL  K QEF ME LLLHHPLDC VCDQGGECELQEQSFNYG+DRG  F    F+  + +  + +  + +   C + + C  Y   +       + +  +  N  + G +  N     +  GVIELCPV W S
Sbjct:    3 NITINELLIWVKKGSTVIQACEAAGVKIPRFCYHDKLFIAGNCRMCLVEVGNSPKPQASCALPFMPNMRIFTNTALVHKAQEFVMEFLLLHHPLDCPVCDQGGECELQEQSFNYGSDRGRFFF---FKKSLGDTFWGSLIKTVLRRCIVCTRCVRYTSLIG--GSDIIGTSNRGGNSEI-GMFKENVLKTETSGGVIELCPVCWSS 202
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BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: E6ZET3_ECTSI (NADH dehydrogenase subunit 11 n=3 Tax=Ectocarpales TaxID=2877 RepID=E6ZET3_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 3.270e-65
Identity = 108/209 (51.67%), Postives = 136/209 (65.07%), Query Frame = 1 
Query:    4 ISTNELLILVKKGSTVIQACQTAGVNISRFCYHDKLFIAGSCRMCSVEVANAPKPQSS*ALPFMPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFICLIFR*HILEKPYKNGFEAL---CCMYSMC*VYPKKM***FYSYV*SWRKLRNWYV*GNYT*NGSF----------WGVIELCPVSW 591
            IS N+L++ V+KGSTVIQACQ AG  + RFCYHDKLF+AG+CRMC VEV+ +PKPQ+S ALPF+PN+R+FTNTAL RK QE  MELLLLHHPLDC VCDQGGECELQEQSFNYG+DRG     L F+  + +  + +  + +   C + + C  Y  ++           + L      G ++  G F           GVIELCPV W
Sbjct:    4 ISINDLIVWVRKGSTVIQACQAAGAQVPRFCYHDKLFVAGNCRMCLVEVSKSPKPQASCALPFLPNLRIFTNTALVRKAQESVMELLLLHHPLDCPVCDQGGECELQEQSFNYGSDRGRF---LFFKNSLGDTFWGSLIKTVLRRCILCTRCVRYTHQI---------GGKDLIGTSNRGGHSEIGMFKESVLKTETSGGVIELCPVCW 200
[Close]
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: Q9XNR7_PYLLI (NADH dehydrogenase subunit 11 n=6 Tax=Ectocarpales TaxID=2877 RepID=Q9XNR7_PYLLI)

HSP 1 Score: 206 bits (525), Expect = 2.060e-64
Identity = 109/211 (51.66%), Postives = 135/211 (63.98%), Query Frame = 1 
Query:    4 ISTNELLILVKKGSTVIQACQTAGVNISRFCYHDKLFIAGSCRMCSVEVANAPKPQSS*ALPFMPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFICLIFR*HILEKPYKNGFEAL---CCMYSMC*VYPKKM***FYSYV*SWRKLRNWYV*GNYT*NGSF----------WGVIELCPVSWCS 597
            IS N+L+I +KKGSTVIQACQ AG  + RFCYHDKLFIAG+CRMC VEV+ +PKPQ+S ALPF+P +R+FTNTAL RK QE  MELLLLHHPLDC VCDQGGECELQEQSFN+G+DRG  F    F+  + +  + +  + +   C + + C  Y  ++             L      G ++  G F           GVIELCPV W S
Sbjct:    4 ISVNDLVIWLKKGSTVIQACQVAGAQVPRFCYHDKLFIAGNCRMCLVEVSKSPKPQASCALPFLPGLRIFTNTALVRKAQESVMELLLLHHPLDCPVCDQGGECELQEQSFNFGSDRGRFFF---FKNSLGDTFWGSLIKTVLRRCVVCTRCVRYTHQI---------GGSDLIGTSNRGGHSEIGMFKENTLKTETSGGVIELCPVGWLS 202
[Close]
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: A0A8E8U4G1_9PHAE (Nad11 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8U4G1_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 1.380e-59
Identity = 101/200 (50.50%), Postives = 127/200 (63.50%), Query Frame = 1 
Query:    1 NISTNELLILVKKGSTVIQACQTAGVNISRFCYHDKLFIAGSCRMCSVEVANAPKPQSS*ALPFMPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFICLIFR*HILEKPYKNGFEALCCMYSMC*VYPKKM***FYSYV*SWRKLRNWYV*-GNYT*NGSFWGVIELCPVSWCS 597
            +I  NE+++ VK+GSTVIQACQ  G  I RFCYHDKL IAG+CRMC VEV N+PKPQ+S ALPF+P +R+FT +AL RK QEF MEL+LL+HPLDC +CDQGGECELQEQSF+YG+DRG  F         L   +       C + + C  Y  ++       V S        +  G+   +    GVI+LCPV W S
Sbjct:    3 SIHINEIIVWVKRGSTVIQACQAVGAIIPRFCYHDKLSIAGNCRMCLVEVNNSPKPQASCALPFLPGLRIFTTSALVRKAQEFVMELILLNHPLDCPICDQGGECELQEQSFHYGSDRGRFFFPKNSLGGALWGSFIKTVLRRCILCTRCVRYTSQIGGIDALGVSSRGSQSEITIFKGSVVKSEISGGVIDLCPVCWSS 202
[Close]
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: A0A4Y5T8Q6_9PHAE (NADH dehydrogenase subunit 11 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8Q6_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 7.790e-55
Identity = 95/209 (45.45%), Postives = 128/209 (61.24%), Query Frame = 1 
Query:    4 ISTNELLILVKKGSTVIQACQTAGVNISRFCYHDKLFIAGSCRMCSVEVANAPKPQSS*ALPFMPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFICLIFR*HILEKPYKNGFEAL---CCMYSMC*VYPKKM***FYSYV*SWRKLRNWYV*GNYT*NGSF----------WGVIELCPVSW 591
            I  N L++ VKKGSTV+QAC+  G  I RFCYH KLF+AG+CRMC VEV N+PKPQ S ALPF+PNM +FTN+AL +K +E  ME LLL+HPLDC +CDQGGEC+LQEQSF++G+DRG  F     +  +++  + +  + +   C + + C  Y + +             +      G  +  G+F           GVIELCPV W
Sbjct:    3 IIINNLVVWVKKGSTVLQACEAVGEEIPRFCYHKKLFLAGNCRMCLVEVGNSPKPQVSCALPFVPNMSIFTNSALVKKAREGVMEFLLLNHPLDCPICDQGGECDLQEQSFHFGSDRGRFFFT---KSSVVDTFWGSLVKTVMRRCIVCTRCVRYTELI---------GGSGVVGTVNRGGQSEIGTFVETSLKTEVSGGVIELCPVGW 199
[Close]
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: A0A8F0FDA4_9PHAE (NADH dehydrogenase subunit 11 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FDA4_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 9.230e-54
Identity = 99/214 (46.26%), Postives = 125/214 (58.41%), Query Frame = 1 
Query:    4 ISTNELLILVKKGSTVIQACQTAGVNISRFCYHDKLFIAGSCRMCSVEVANAPKPQSS*ALPFMPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFICLIFR*HILEKPYKNGFEAL--------CCMYSMC*VYPKKM***FYSYV*SWRKLRNWYV*GNYT*NGSF----------WGVIELCPVSW 591
            I  N L+I VKKGSTV+QAC+  G  I RFCYH KLFIAG+CRMC VEV N+PKPQ S ALPF+PNM + TN++L RK +E  +E +LL+HPLDC VCDQGGEC+LQEQ+F++G+DRG  F          +    + F  L        C + + C  Y   +   F   V +          G Y+  G+F           GVIELCPV W
Sbjct:    3 IIINNLIIWVKKGSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVEVGNSPKPQVSCALPFLPNMSILTNSSLVRKARESVLEFILLNHPLDCPVCDQGGECDLQEQNFHFGSDRGRFFF--------KKNSIGDTFWGLLIKTIMRRCILCTRCIRYLDLIAGFFLVGVTNR---------GGYSGIGTFIENFLGTEISGGVIELCPVGW 199
[Close]
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Match: Q2TUA0_DICDH (NADH dehydrogenase subunit 11 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUA0_DICDH)

HSP 1 Score: 175 bits (444), Expect = 2.920e-52
Identity = 94/207 (45.41%), Postives = 124/207 (59.90%), Query Frame = 1 
Query:    4 ISTNELLILVKKGSTVIQACQTAGVNISRFCYHDKLFIAGSCRMCSVEVANAPKPQSS*ALPFMPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNYGTDRGNLFICLIFR*HILEKPYKNGFEALC-CMYSMC*VYPKKM***FYSYV*SWRKLRNWYV*GNYT*NGSF----------WGVIELCPVSW 591
            I+ N L++ VK GSTV+QAC+ AG  + RFCYH+KL IAG+CRMC VEV N+PKPQ S ALPF+PNM +FT +AL RK +E  ME +L++HPLDC +CDQGGEC+LQEQSF++G+DRG  F        +        + AL   +   C V  + +    YS +     +      G  +  G F           GVI+LCPV W
Sbjct:    3 ITINNLVVWVKGGSTVLQACEAAGEEVPRFCYHEKLLIAGNCRMCLVEVGNSPKPQVSCALPFIPNMSIFTESALVRKAREGVMEFILVNHPLDCPICDQGGECDLQEQSFHFGSDRGRFFF-------LKNSSVDTFWGALVKTVMKRCIVCTRCV---RYSDLVGGTGIVGTTNRGVNSEIGMFVETSLKTEVSGGVIDLCPVGW 199
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67991.14418.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R4QQ95_9PHAE1.950e-7157.82NADH dehydrogenase subunit 11 n=6 Tax=Fucus TaxID=... [more]
A0A8F0K0N1_9PHAE5.250e-6953.30NADH dehydrogenase subunit 11 n=1 Tax=Desmarestia ... [more]
F8UWN5_9PHAE1.090e-6855.24NADH dehydrogenase subunit 11 n=73 Tax=Phaeophycea... [more]
A0A0G2RLB7_TUROR1.990e-6856.31NADH dehydrogenase subunit 11 n=24 Tax=Sargassacea... [more]
E6ZET3_ECTSI3.270e-6551.67NADH dehydrogenase subunit 11 n=3 Tax=Ectocarpales... [more]
Q9XNR7_PYLLI2.060e-6451.66NADH dehydrogenase subunit 11 n=6 Tax=Ectocarpales... [more]
A0A8E8U4G1_9PHAE1.380e-5950.50Nad11 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID... [more]
A0A4Y5T8Q6_9PHAE7.790e-5545.45NADH dehydrogenase subunit 11 n=1 Tax=Dictyopteris... [more]
A0A8F0FDA4_9PHAE9.230e-5446.26NADH dehydrogenase subunit 11 n=1 Tax=Protohalopte... [more]
Q2TUA0_DICDH2.920e-5245.41NADH dehydrogenase subunit 11 n=1 Tax=Dictyota dic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67991contigH-elongata_contig67991:104..700 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score84.0
Seed ortholog evalue2.9e-14
Seed eggNOG ortholog32264.tetur02g14260.1
Preferred nameNdufs1
KEGG rclassRC00061
KEGG koko:K03934
KEGG TC3.D.1.6
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00143
GOsGO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0006091,GO:0006915,GO:0006996,GO:0007005,GO:0008137,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009987,GO:0012501,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016651,GO:0016655,GO:0019866,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0045333,GO:0048037,GO:0050136,GO:0051536,GO:0051540,GO:0055114,GO:0070469,GO:0071840,GO:0072593,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1902494,GO:1990204
EggNOG free text desc.Belongs to the complex I 75 kDa subunit family
EggNOG OGs38DHR@33154,3BE04@33208,3CT34@33213,41TNR@6656,COG1034@1,KOG2282@2759
EC1.6.5.3,1.6.99.3
COG Functional cat.C
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons1
Model size597
Cds size195
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67991.14418.1prot_H-elongata_contig67991.14418.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig67991 314..508 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931072.4258678-UTR-H-elongata_contig67991:103..3131622931072.4258678-UTR-H-elongata_contig67991:103..313Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig67991 104..313 -
1691679686.37118-UTR-H-elongata_contig67991:103..3131691679686.37118-UTR-H-elongata_contig67991:103..313Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig67991 104..313 -
1622931072.4542565-UTR-H-elongata_contig67991:508..7001622931072.4542565-UTR-H-elongata_contig67991:508..700Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig67991 509..700 -
1691679686.4060593-UTR-H-elongata_contig67991:508..7001691679686.4060593-UTR-H-elongata_contig67991:508..700Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig67991 509..700 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931072.4402616-CDS-H-elongata_contig67991:313..5081622931072.4402616-CDS-H-elongata_contig67991:313..508Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67991 314..508 -
1691679686.3863513-CDS-H-elongata_contig67991:313..5081691679686.3863513-CDS-H-elongata_contig67991:313..508Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67991 314..508 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig67991.14418.1

>prot_H-elongata_contig67991.14418.1 ID=prot_H-elongata_contig67991.14418.1|Name=mRNA_H-elongata_contig67991.14418.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp
MPNMRVFTNTALNRKTQEFFMELLLLHHPLDCLVCDQGGECELQEQSFNY
GTDRGNLFICLIFR*
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mRNA from alignment at H-elongata_contig67991:104..700-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig67991.14418.1 ID=mRNA_H-elongata_contig67991.14418.1|Name=mRNA_H-elongata_contig67991.14418.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=597bp|location=Sequence derived from alignment at H-elongata_contig67991:104..700- (Himanthalia elongata Himel1 dioecious)
AATATATCTACAAATGAACTTTTAATTTTGGTAAAAAAAGGATCTACTGT
TATTCAAGCATGTCAAACAGCAGGTGTAAATATCTCTAGATTTTGTTATC
ACGATAAGCTTTTTATTGCTGGTAGTTGTCGTATGTGTTCAGTGGAGGTT
GCGAATGCTCCAAAACCTCAATCTTCTTGAGCTTTACCTTTTATGCCTAA
TATGAGAGTTTTTACAAACACAGCTTTAAATCGAAAAACTCAAGAATTTT
TCATGGAATTACTTTTGCTGCATCATCCTTTAGATTGTTTGGTATGTGAT
CAAGGGGGTGAGTGTGAGCTTCAAGAACAAAGCTTTAATTATGGTACAGA
TAGAGGTAATTTATTTATTTGTTTAATCTTTAGGTGACACATTTTGGAGA
AGCCTTATAAAAACGGTTTTGAGGCGTTGTGTTGTATGTACTCGATGTGT
TAGGTATACCCCAAAAAAATGTAGTAGTGATTTTATAGTTATGTCTAATC
CTGGAGGAAACTCCGAAATTGGTATGTCTAAGGAAACTATACTTAAAACG
GAAGTTTCTGGGGGGTTATTGAACTTTGCCCTGTTTCATGGTGTAGT
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Coding sequence (CDS) from alignment at H-elongata_contig67991:104..700-

>mRNA_H-elongata_contig67991.14418.1 ID=mRNA_H-elongata_contig67991.14418.1|Name=mRNA_H-elongata_contig67991.14418.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=390bp|location=Sequence derived from alignment at H-elongata_contig67991:104..700- (Himanthalia elongata Himel1 dioecious)
ATGCCTAATATGAGAGTTTTTACAAACACAGCTTTAAATCGAAAAACTCA
AGAATTTTTCATGGAATTACTTTTGCTGCATCATCCTTTAGATTGTTTGG
TATGTGATCAAGGGGGTGAGTGTGAGCTTCAAGAACAAAGCTTTAATTAT
GGTACAGATAGAGGTAATTTATTTATTTGTTTAATCTTTAGGTGAATGCC
TAATATGAGAGTTTTTACAAACACAGCTTTAAATCGAAAAACTCAAGAAT
TTTTCATGGAATTACTTTTGCTGCATCATCCTTTAGATTGTTTGGTATGT
GATCAAGGGGGTGAGTGTGAGCTTCAAGAACAAAGCTTTAATTATGGTAC
AGATAGAGGTAATTTATTTATTTGTTTAATCTTTAGGTGA
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