prot_H-elongata_contig6798.14416.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6798.14416.1 vs. uniprot
Match: A0A2N9F271_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F271_FAGSY) HSP 1 Score: 72.4 bits (176), Expect = 2.270e-13 Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 0
Query: 2 KLKSALYGLAQSPAAWFGEIDSSLLDIGFVATYADPYIYLLRSGMDVFILTLYFDDVLVTG 62
KL+ +LYGL Q+P AWF S LL IGFVA+ ADP +++LR+G VF L LY DD+++TG
Sbjct: 400 KLQKSLYGLKQAPRAWFERFTSHLLTIGFVASTADPSLFVLRTGSTVFYLLLYVDDIILTG 460
BLAST of mRNA_H-elongata_contig6798.14416.1 vs. uniprot
Match: A0A2N9FIJ5_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FIJ5_FAGSY) HSP 1 Score: 70.1 bits (170), Expect = 1.490e-12 Identity = 33/61 (54.10%), Postives = 44/61 (72.13%), Query Frame = 0
Query: 2 KLKSALYGLAQSPAAWFGEIDSSLLDIGFVATYADPYIYLLRSGMDVFILTLYFDDVLVTG 62
KL+ +LYGL Q+P AWF S LL IGFVA+ ADP +++LR+G V L LY DD+++TG
Sbjct: 685 KLQKSLYGLKQAPRAWFERFTSHLLTIGFVASTADPSLFVLRTGSTVLYLLLYVDDIILTG 745
BLAST of mRNA_H-elongata_contig6798.14416.1 vs. uniprot
Match: A0A2N9F3A0_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F3A0_FAGSY) HSP 1 Score: 67.8 bits (164), Expect = 9.720e-12 Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 0
Query: 2 KLKSALYGLAQSPAAWFGEIDSSLLDIGFVATYADPYIYLLRSGMDVFILTLYFDDVLVTG 62
KL+ +LYGL Q+P AWF S LL IGFVA+ ADP +++LR+G V L LY DD+++T
Sbjct: 703 KLQKSLYGLKQAPRAWFERFTSHLLTIGFVASTADPSLFVLRTGSTVLYLLLYVDDIILTS 763
BLAST of mRNA_H-elongata_contig6798.14416.1 vs. uniprot
Match: UPI00142E428A (uncharacterized protein LOC108871170 n=2 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E428A) HSP 1 Score: 66.6 bits (161), Expect = 2.490e-11 Identity = 29/62 (46.77%), Postives = 43/62 (69.35%), Query Frame = 0
Query: 1 MKLKSALYGLAQSPAAWFGEIDSSLLDIGFVATYADPYIYLLRSGMDVFILTLYFDDVLVTG 62
++L ALYGL Q+P AW+G IDS L GF + D +Y+++ G DV I++LY DD+++TG
Sbjct: 988 LRLHKALYGLKQAPRAWYGRIDSYFLQNGFERSMNDAALYIMKQGGDVLIVSLYVDDIIITG 1049
BLAST of mRNA_H-elongata_contig6798.14416.1 vs. uniprot
Match: A0A2N9EGA9_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EGA9_FAGSY) HSP 1 Score: 65.9 bits (159), Expect = 4.570e-11 Identity = 29/60 (48.33%), Postives = 41/60 (68.33%), Query Frame = 0
Query: 3 LKSALYGLAQSPAAWFGEIDSSLLDIGFVATYADPYIYLLRSGMDVFILTLYFDDVLVTG 62
L ++YGL Q+P AWF + S LL IGF+A+ ADP ++L + G V L LY DD+++TG
Sbjct: 160 LHKSIYGLRQAPRAWFEKFSSHLLTIGFIASQADPSLFLYKHGSTVLFLLLYVDDIIITG 219
BLAST of mRNA_H-elongata_contig6798.14416.1 vs. uniprot
Match: A0A6H5KRT7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRT7_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 4.600e-11 Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 0
Query: 2 KLKSALYGLAQSPAAWFGEIDSSLLDIGFVATYADPYIYLLRSGMDVFILTLYFDDVLVTG 62
KL+ +LYGL+QSPA W +D SL G+ T +DP +Y+ SG + ILT+Y DD+L+TG
Sbjct: 4 KLERSLYGLSQSPALWSDTLDKSLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITG 64
BLAST of mRNA_H-elongata_contig6798.14416.1 vs. uniprot
Match: A0A2N9FD48_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FD48_FAGSY) HSP 1 Score: 65.9 bits (159), Expect = 4.640e-11 Identity = 29/60 (48.33%), Postives = 41/60 (68.33%), Query Frame = 0
Query: 3 LKSALYGLAQSPAAWFGEIDSSLLDIGFVATYADPYIYLLRSGMDVFILTLYFDDVLVTG 62
L ++YGL Q+P AWF + S LL IGF+A+ ADP ++L + G V L LY DD+++TG
Sbjct: 810 LHKSIYGLRQAPRAWFEKFSSHLLTIGFIASQADPSLFLYKHGSTVLFLLLYVDDIIITG 869
BLAST of mRNA_H-elongata_contig6798.14416.1 vs. uniprot
Match: A0A6A2WYU2_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WYU2_HIBSY) HSP 1 Score: 65.5 bits (158), Expect = 6.330e-11 Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query: 3 LKSALYGLAQSPAAWFGEIDSSLLDIGFVATYADPYIYLLRSGMDVFILTLYFDDVLVTG 62
LK ALYGL Q+P AW+ ID LL +GF + ++P +Y+ S +D+ I+ +Y DDVLVTG
Sbjct: 637 LKKALYGLKQAPRAWYARIDEHLLSLGFEKSPSEPTLYVKHSTVDILIVFVYVDDVLVTG 696
BLAST of mRNA_H-elongata_contig6798.14416.1 vs. uniprot
Match: D1GEF6_BRARP (Disease resistance protein n=1 Tax=Brassica rapa subsp. pekinensis TaxID=51351 RepID=D1GEF6_BRARP) HSP 1 Score: 65.5 bits (158), Expect = 6.380e-11 Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query: 3 LKSALYGLAQSPAAWFGEIDSSLLDIGFVATYADPYIYLLRSGMDVFILTLYFDDVLVTG 62
L +LYGL QSP AWF + + L++ GFV + DP +++ R G D+ +L LY DD+L+TG
Sbjct: 1035 LHKSLYGLKQSPRAWFDKFSTYLIEFGFVCSIKDPSLFIYRRGKDIIMLLLYVDDMLITG 1094
BLAST of mRNA_H-elongata_contig6798.14416.1 vs. uniprot
Match: A0A5A7UEV5_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7UEV5_CUCME) HSP 1 Score: 65.1 bits (157), Expect = 8.070e-11 Identity = 28/60 (46.67%), Postives = 44/60 (73.33%), Query Frame = 0
Query: 3 LKSALYGLAQSPAAWFGEIDSSLLDIGFVATYADPYIYLLRSGMDVFILTLYFDDVLVTG 62
LK ALYGL Q+P AW+ +ID LL +GF+ + ++ +Y+ +G ++ I++LY DD+LVTG
Sbjct: 56 LKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTG 115 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6798.14416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig6798.14416.1 ID=prot_H-elongata_contig6798.14416.1|Name=mRNA_H-elongata_contig6798.14416.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=62bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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