mRNA_H-elongata_contig6797.14413.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6797.14413.1
Unique NamemRNA_H-elongata_contig6797.14413.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 3.930e-72
Identity = 116/217 (53.46%), Postives = 154/217 (70.97%), Query Frame = 1
Query:    1 QSITGAIMYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINEF 609
            Q I G++MY+ QV +YD +YA  QLAR M+KP K H+  AK+ LRYLAG+ +FSITY++G              NPDN KSTSSY+ +LAN P+SF+ G+Q LTA STMEAELVA+  AMKE++FC N+M ELGF K F ++PVY +NT+ LH   N++ S R KHIALR+ F++ELV EG+++IH+  TE  L D+GT + +KHR   L+ LIN F
Sbjct:  219 QGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLINNF 435          
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 1.040e-68
Identity = 115/215 (53.49%), Postives = 153/215 (71.16%), Query Frame = 1
Query:    1 QSITGAIMYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLIN 603
            Q I G++MY+ QV +YD +YA  QLAR M+KP K H+  AK+ LRYLAG+ +FSITY++G              NPDN KSTSSY+ +LAN P+SF+ G+Q LTA STMEAELVA+  AMKE++FC N+M ELG  K F ++PVY +NT+ LH   N++ S R KHIALR+ F++ELV EG+++IH+V TE  L D+GT + +KHR   L+ LIN
Sbjct:  440 QGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLIN 654          
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 1.180e-68
Identity = 110/210 (52.38%), Postives = 144/210 (68.57%), Query Frame = 1
Query:   22 MYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINEF 609
            MY+ QV +YD +YA   LAR M+KP K H   AK  LRYLAG+ +FSITY++G              NPDN KSTSSY+ +LAN P+SF+ G+Q LTA STMEAELVA+  AMKE++FC N+M ELGF K F ++PVY +NT+ LH   N++ S R KHIALR+ F++ELV EG+++IH+  TE  L  +GT + +KHR   L+  IN F
Sbjct:    1 MYIAQVLRYDIMYATGHLARPMAKPSKVHTVTAKQTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTKHFNKHRFKHLMDRINNF 210          
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 2.010e-68
Identity = 116/217 (53.46%), Postives = 155/217 (71.43%), Query Frame = 1
Query:    1 QSITGAIMYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINEF 609
            Q I G++MY+ QV +YD +YA  QLAR M+KP K H+  AK+ LRYLAG+ +FSITY++G              NPDN KSTSSY+ +LAN P+SF+ G+Q LTA STMEAELVA+  AMKE++FC N+M ELGF K F ++PVY +NT+ LH   N++ S R KHIALR+ F++ELV EG+++IH+V+TE  L D+GT + + HR   L+ LIN F
Sbjct:  779 QGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLINNF 995          
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 2.800e-66
Identity = 115/217 (53.00%), Postives = 153/217 (70.51%), Query Frame = 1
Query:    1 QSITGAIMYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINEF 609
            Q I G++MY+ QV +YD +YA  QLAR M+KP K H+  AK+ LRYLAG+ +FSITY++G              NPDN KSTSSY+ +LAN P+SF+ G+Q LTA STMEAELVA+  AM E++F  N+M ELGF K F ++PVY +NT+ LH   N++ S R KHIALR+ F++ELV EG+++IH+V TE  L D+GT + +KHR   L+ LIN F
Sbjct: 1448 QGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNF 1664          
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 4.440e-65
Identity = 112/215 (52.09%), Postives = 155/215 (72.09%), Query Frame = 1
Query:    4 SITGAIMYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINE 606
            +I G+++YL Q+++YD +Y  +QLAR MS P K H+  AK++LRYL+GS +FSITY+RG              NPDN KS SSYI++++  P+SFK G+QSLTA ST+EAELVAA  AMKE++FC N+M ELGF   FR  P+YIN T+ LHV  N+T S R KH+ALR+ +++E+VKEG+++IH++ TE  L D+GT +L+K RH  LI  I +
Sbjct:  474 AIIGSVIYLAQITRYDIMYCASQLARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYIN-TATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTKHLNKQRHQCLIDKIKK 687          
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 1.370e-62
Identity = 107/217 (49.31%), Postives = 151/217 (69.59%), Query Frame = 1
Query:    1 QSITGAIMYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINEF 609
            Q+I G++MYL QV++YD +Y  +Q AR MS P K H+  AK++LRYL+GS +FSITY+RG              N DN KS SSYI++++  P S K G+QSLTA ST+EAELVA+  AMKE +FC N+M ELGF   F   P++I++T+ L+V  N+T S   KH+ALR+ +++++VKEG+++IH++ TE  L D+GT YL+K RH +LI  I  F
Sbjct:  560 QAIIGSVMYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNKQRHQYLIDKIKNF 776          
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 9.500e-59
Identity = 103/219 (47.03%), Postives = 143/219 (65.30%), Query Frame = 1
Query:    1 QSITGAIMYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINEFRA 615
            Q I G ++YL Q+ +YD +YA +QLAR M+KP K H+  AK   RYLAG+  F I Y+RG              NPDN KSTSS++ +L + P++FK G+QSLT QSTME ELVAA  A+KE++FC N++ ELGF K   +VP+Y +NT+ LH   N++ S   KHIALR+ F++ELV EG++ IH+V  +    D+GT +L+K R   L+ +I  F  
Sbjct:  502 QGIVGCLIYLSQILRYDIMYATSQLARPMAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTKHLNKDRFQLLLNIIKNFNV 720          
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5KNV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV2_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 1.670e-54
Identity = 93/168 (55.36%), Postives = 120/168 (71.43%), Query Frame = 1
Query:    7 ITGAIMYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALR 468
            I G++MY+ QV +YD +YA  QLAR M+KP K H+  AK+ LRYLAG+ +FSITY++G              NPDN KSTSSY+ +LAN P+SF+ G+Q LTA STMEAELVA+  AMKE++FC N+M ELGF K F ++PVY +NT+ LH   N++ S R KHIALR
Sbjct:   98 IVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALR 265          
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 1.130e-48
Identity = 96/217 (44.24%), Postives = 135/217 (62.21%), Query Frame = 1
Query:    1 QSITGAIMYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINEF 609
            QS+TG+I+YL Q +Q+D  YA  QL++  S P + ++  AK+VLRYL G+    I Y+RG              NPDN +ST+ Y+  LA   IS+    Q+LTAQST+EAE+ A + + +E+++  N M EL F K F  VP+  ++T AL VA N   S R KH+ALRY F++ELV  GQ+T+H   +EHQL D+ T YL KHR   +I+ I +F
Sbjct:  276 QSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNF-KTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDF 491          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5U2_9PHAE3.930e-7253.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JME8_9PHAE1.040e-6853.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KMK0_9PHAE1.180e-6852.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNH5_9PHAE2.010e-6853.46Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KJH6_9PHAE2.800e-6653.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBU1_9PHAE4.440e-6552.09CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L6R7_9PHAE1.370e-6249.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JG39_9PHAE9.500e-5947.03Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KNV2_9PHAE1.670e-5455.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQD0_9PHAE1.130e-4844.24Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6797contigH-elongata_contig6797:5425..6084 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score110.2
Seed ortholog evalue1.2e-21
Seed eggNOG ortholog67593.Physo109658
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QHRW@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size618
Cds size597
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6797.14413.1prot_H-elongata_contig6797.14413.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6797 5446..6084 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931071.869558-UTR-H-elongata_contig6797:5424..54451622931071.869558-UTR-H-elongata_contig6797:5424..5445Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6797 5425..5445 +
1691679686.1411605-UTR-H-elongata_contig6797:5424..54451691679686.1411605-UTR-H-elongata_contig6797:5424..5445Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6797 5425..5445 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931071.8845098-CDS-H-elongata_contig6797:5445..56021622931071.8845098-CDS-H-elongata_contig6797:5445..5602Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6797 5446..5602 +
1691679686.154448-CDS-H-elongata_contig6797:5445..56021691679686.154448-CDS-H-elongata_contig6797:5445..5602Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6797 5446..5602 +
1622931071.9038112-CDS-H-elongata_contig6797:5644..60841622931071.9038112-CDS-H-elongata_contig6797:5644..6084Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6797 5645..6084 +
1691679686.1803532-CDS-H-elongata_contig6797:5644..60841691679686.1803532-CDS-H-elongata_contig6797:5644..6084Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6797 5645..6084 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6797.14413.1

>prot_H-elongata_contig6797.14413.1 ID=prot_H-elongata_contig6797.14413.1|Name=mRNA_H-elongata_contig6797.14413.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp
MYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITY
RRGNPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMK
ESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRY
VFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINEFRA*
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mRNA from alignment at H-elongata_contig6797:5425..6084+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6797.14413.1 ID=mRNA_H-elongata_contig6797.14413.1|Name=mRNA_H-elongata_contig6797.14413.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=660bp|location=Sequence derived from alignment at H-elongata_contig6797:5425..6084+ (Himanthalia elongata Himel1 dioecious)
CAATCCATCACTGGTGCGATAATGTACCTCGTGCAGGTCTCGCAATACGA CACCCTCTACGCGGTCAATCAGCTGGCGAGGGAAATGTCCAAGCCTTTAA AAGCTCATATTAGGGTGGCAAAATACGTACTCCGGTACTTGGCCGGGTCC GCTAATTTCTCGATCACCTACAGGCGAGGTGAATTTAAACTAACGACTTA CACTGACGGAAACTGATGAGGGAATCCTGACAACGATAAGTCTACCTCGT CGTACATCGTGATACTCGCCAACGAGCCGATCAGCTTCAAAGTGGGAGTC CAGAGTCTGACGGCTCAATCGACTATGGAGGCGGAGCTCGTGGCAGCTAC CACAGCAATGAAGGAGTCACTATTCTGCAGAAATGTAATGATGGAGTTAG GTTTCGCGAAGGGATTTCGAAGGGTTCCTGTCTACATCAACAACACATCG GCGTTGCACGTGGCGGTAAACAAGACATCTAGCCCAAGGGCGAAGCACAT CGCCCTGAGATACGTTTTCGTTCAAGAGCTAGTGAAGGAAGGACAGGTCA CCATCCACTTCGTCAAGACGGAGCACCAACTCACCGATCTGGGAACGACA TATCTCAGCAAACATCGCCACCACTTCCTCATCAAGCTTATCAACGAGTT TAGAGCCTGA
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Coding sequence (CDS) from alignment at H-elongata_contig6797:5425..6084+

>mRNA_H-elongata_contig6797.14413.1 ID=mRNA_H-elongata_contig6797.14413.1|Name=mRNA_H-elongata_contig6797.14413.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig6797:5425..6084+ (Himanthalia elongata Himel1 dioecious)
ATGTACCTCGTGCAGGTCTCGCAATACGACACCCTCTACGCGGTCAATCA
GCTGGCGAGGGAAATGTCCAAGCCTTTAAAAGCTCATATTAGGGTGGCAA
AATACGTACTCCGGTACTTGGCCGGGTCCGCTAATTTCTCGATCACCTAC
AGGCGAGATGTACCTCGTGCAGGTCTCGCAATACGACACCCTCTACGCGG
TCAATCAGCTGGCGAGGGAAATGTCCAAGCCTTTAAAAGCTCATATTAGG
GTGGCAAAATACGTACTCCGGTACTTGGCCGGGTCCGCTAATTTCTCGAT
CACCTACAGGCGAGGGAATCCTGACAACGATAAGTCTACCTCGTCGTACA
TCGTGATACTCGCCAACGAGCCGATCAGCTTCAAAGTGGGAGTCCAGAGT
CTGACGGCTCAATCGACTATGGAGGCGGAGCTCGTGGCAGCTACCACAGC
AATGAAGGAGTCACTATTCTGCAGAAATGTAATGATGGAGTTAGGTTTCG
CGAAGGGATTTCGAAGGGTTCCTGTCTACATCAACAACACATCGGCGTTG
CACGTGGCGGTAAACAAGACATCTAGCCCAAGGGCGAAGCACATCGCCCT
GAGATACGTTTTCGTTCAAGAGCTAGTGAAGGAAGGACAGGTCACCATCC
ACTTCGTCAAGACGGAGCACCAACTCACCGATCTGGGAACGACATATCTC
AGCAAACATCGCCACCACTTCCTCATCAAGCTTATCAACGAGTTTAGAGC
CTGAGGAATCCTGACAACGATAAGTCTACCTCGTCGTACATCGTGATACT
CGCCAACGAGCCGATCAGCTTCAAAGTGGGAGTCCAGAGTCTGACGGCTC
AATCGACTATGGAGGCGGAGCTCGTGGCAGCTACCACAGCAATGAAGGAG
TCACTATTCTGCAGAAATGTAATGATGGAGTTAGGTTTCGCGAAGGGATT
TCGAAGGGTTCCTGTCTACATCAACAACACATCGGCGTTGCACGTGGCGG
TAAACAAGACATCTAGCCCAAGGGCGAAGCACATCGCCCTGAGATACGTT
TTCGTTCAAGAGCTAGTGAAGGAAGGACAGGTCACCATCCACTTCGTCAA
GACGGAGCACCAACTCACCGATCTGGGAACGACATATCTCAGCAAACATC
GCCACCACTTCCTCATCAAGCTTATCAACGAGTTTAGAGCCTGA
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