prot_H-elongata_contig67952.14409.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67952.14409.1
Unique Nameprot_H-elongata_contig67952.14409.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length98
Homology
BLAST of mRNA_H-elongata_contig67952.14409.1 vs. uniprot
Match: D8LCZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ3_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 1.840e-51
Identity = 88/98 (89.80%), Postives = 95/98 (96.94%), Query Frame = 0
Query:    1 DLVQYIHACQGEGAILIFLSGWEEISAVHDKLEMLPQARQWRLYALHSQMPTNQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVYVIDGGKHKEKS 98
            DLV+++HA +GEGAILIFLSGWEEISAVHDKLE LP+AR WRLYALHSQMPT+QQRDVFLRPPRG+RKIVIATNIAESSITIDDVVYVIDGGKHKEKS
Sbjct:  431 DLVRHVHAYEGEGAILIFLSGWEEISAVHDKLEALPEARAWRLYALHSQMPTSQQRDVFLRPPRGVRKIVIATNIAESSITIDDVVYVIDGGKHKEKS 528          
BLAST of mRNA_H-elongata_contig67952.14409.1 vs. uniprot
Match: A0A4D9CM44_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CM44_9STRA)

HSP 1 Score: 144 bits (362), Expect = 3.420e-42
Identity = 67/97 (69.07%), Postives = 84/97 (86.60%), Query Frame = 0
Query:    2 LVQYIHACQGEGAILIFLSGWEEISAVHDKLEMLPQARQWRLYALHSQMPTNQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVYVIDGGKHKEKS 98
            LV+ I A +G GAIL+FL GWE+I+ VH+ L+ LPQ+R+WRLY LHSQ+P +QQR++F  PP G+RKIV+ATNIAESSITIDDVVYV+DGGKHKEK+
Sbjct:   22 LVKKIDAEEGSGAILVFLPGWEDITKVHETLQRLPQSRRWRLYPLHSQLPMDQQREIFSPPPPGLRKIVLATNIAESSITIDDVVYVLDGGKHKEKT 118          
BLAST of mRNA_H-elongata_contig67952.14409.1 vs. uniprot
Match: I2CQV2_NANGC (ATP-dependent RNA helicase DHX36 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CQV2_NANGC)

HSP 1 Score: 143 bits (361), Expect = 9.800e-38
Identity = 67/97 (69.07%), Postives = 84/97 (86.60%), Query Frame = 0
Query:    2 LVQYIHACQGEGAILIFLSGWEEISAVHDKLEMLPQARQWRLYALHSQMPTNQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVYVIDGGKHKEKS 98
            LV+ I A +G GAIL+FL GWE+I+ VH+ L+ LPQ+R+WRLY LHSQ+P +QQR++F  PP G+RKIV+ATNIAESSITIDDVVYV+DGGKHKEK+
Sbjct:   49 LVKKIDAEEGPGAILVFLPGWEDITKVHETLQRLPQSRRWRLYPLHSQLPMDQQREIFSPPPPGLRKIVLATNIAESSITIDDVVYVLDGGKHKEKT 145          
BLAST of mRNA_H-elongata_contig67952.14409.1 vs. uniprot
Match: A0A7R9YF83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YF83_9STRA)

HSP 1 Score: 113 bits (283), Expect = 3.830e-30
Identity = 59/100 (59.00%), Postives = 75/100 (75.00%), Query Frame = 0
Query:    1 DLVQYIHACQGEGAILIFLSGWEEISAVHDKLEMLPQARQWRLYALHSQMPTNQQRDVFLRP--PRGIRKIVIATNIAESSITIDDVVYVIDGGKHKEKS 98
             LV++IH   GEGAILIF+SGW  I A+  KL  LP+A   ++Y LH  MP +QQR +F +P  PR +RK+V++TNIAESSITI+DVVYVID GK KEK+
Sbjct:   29 SLVRHIHREMGEGAILIFMSGWGPIDALCSKLRKLPEAASLKIYQLHGSMPMSQQRGIFEKPADPR-VRKVVVSTNIAESSITIEDVVYVIDFGKRKEKT 127          
BLAST of mRNA_H-elongata_contig67952.14409.1 vs. uniprot
Match: A0A7S0MWB1_9CHLO (RNA helicase n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MWB1_9CHLO)

HSP 1 Score: 121 bits (304), Expect = 4.900e-30
Identity = 63/97 (64.95%), Postives = 75/97 (77.32%), Query Frame = 0
Query:    2 LVQYIHACQGEGAILIFLSGWEEISAVHDKLEMLPQARQWRLYALHSQMPTNQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVYVIDGGKHKEKS 98
            LVQ I   +G+GA+LIFL GWE+IS V D L+ L     W LY LH  +PT+QQR +F RPP G+RKIV+ATNIAESSITIDDV+YVID GKHKEK+
Sbjct:   62 LVQMIDK-EGDGAVLIFLPGWEDISKVVDSLKSLG-CPHWLLYPLHGSLPTSQQRGIFDRPPPGVRKIVVATNIAESSITIDDVIYVIDCGKHKEKT 156          
BLAST of mRNA_H-elongata_contig67952.14409.1 vs. uniprot
Match: A0A7C9ACT9_OPUST (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ACT9_OPUST)

HSP 1 Score: 112 bits (281), Expect = 5.480e-30
Identity = 57/99 (57.58%), Postives = 75/99 (75.76%), Query Frame = 0
Query:    3 VQYIHACQGEGAILIFLSGWEEISAVHDKLE---MLPQARQWRLYALHSQMPTNQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVYVIDGGKHKEKS 98
            ++YI   +GEGAIL+FL+GW+EIS +HDK++    L  +R++ +  LH  MPT  QR++F R P  +RKIV+ATNIAESSITIDDVVYV+D GK KE S
Sbjct:   20 IEYICLNEGEGAILVFLTGWDEISKLHDKIKANKFLGDSRKFLVLPLHGSMPTVNQREIFDRSPASMRKIVLATNIAESSITIDDVVYVVDCGKAKETS 118          
BLAST of mRNA_H-elongata_contig67952.14409.1 vs. uniprot
Match: A0A7C9A9S9_OPUST (Uncharacterized protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9A9S9_OPUST)

HSP 1 Score: 115 bits (289), Expect = 1.140e-29
Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 0
Query:    3 VQYIHACQGEGAILIFLSGWEEISAVHDKLE---MLPQARQWRLYALHSQMPTNQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVYVIDGGKHKEKS 98
            ++YI   +GEGAIL+FL+GW+EIS +HDK++    L  +R++ +  LH  MPT  QR++F RPP  +RKIV+ATNIAESSITIDDVVYV+D GK KE S
Sbjct:  159 IEYICLNEGEGAILVFLTGWDEISKLHDKIKANKFLGDSRKFLVLPLHGSMPTVNQREIFDRPPASMRKIVLATNIAESSITIDDVVYVVDCGKAKETS 257          
BLAST of mRNA_H-elongata_contig67952.14409.1 vs. uniprot
Match: A0A7S3FTI7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FTI7_9CHLO)

HSP 1 Score: 113 bits (283), Expect = 1.410e-29
Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = 0
Query:    1 DLVQYI--HAC--QGEGAILIFLSGWEEISAVHDKLE---MLPQARQWRLYALHSQMPTNQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVYVIDGGKHKEKS 98
            DL++++  H C  +GEGA+L+FL+GW++IS +HD+L+   +L    Q+R+  LH  MPT  Q+ +F  PP G+RKIV++TNIAE+SITIDD+V+V+D GK KEK+
Sbjct:   51 DLIEHVIEHICVTEGEGAMLVFLTGWDDISKLHDQLQRNRILSNKNQYRIIPLHGSMPTANQQKIFANPPPGVRKIVLSTNIAETSITIDDIVFVVDCGKAKEKT 155          
BLAST of mRNA_H-elongata_contig67952.14409.1 vs. uniprot
Match: UPI00077A3C86 (ATP-dependent RNA helicase DHX36-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A3C86)

HSP 1 Score: 117 bits (293), Expect = 1.510e-28
Identity = 59/99 (59.60%), Postives = 78/99 (78.79%), Query Frame = 0
Query:    2 LVQYIHACQGEGAILIFLSGWEEISAVHDKL--EMLPQARQWRLYALHSQMPTNQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVYVIDGGKHKEKS 98
            +V +I     EGAIL+FL GW++IS VHDKL  E +  + ++R+  LHS MP++ Q++VF RPP G+RKIVIATNIAE+SITIDDVV+V+DGGK KEK+
Sbjct:  277 VVTHISLHMEEGAILVFLPGWDDISKVHDKLKEEKMFSSDKFRIIPLHSMMPSSNQKEVFDRPPEGVRKIVIATNIAETSITIDDVVFVVDGGKVKEKT 375          
BLAST of mRNA_H-elongata_contig67952.14409.1 vs. uniprot
Match: UPI001CF2D9CA (ATP-dependent DNA/RNA helicase DHX36-like isoform X2 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF2D9CA)

HSP 1 Score: 117 bits (292), Expect = 2.100e-28
Identity = 59/99 (59.60%), Postives = 77/99 (77.78%), Query Frame = 0
Query:    2 LVQYIHACQGEGAILIFLSGWEEISAVHDKL--EMLPQARQWRLYALHSQMPTNQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVYVIDGGKHKEKS 98
            +V +I     EGAIL+FL GW++IS VHDKL  E +  + ++R+  LHS MP+  Q++VF RPP G+RKIVIATNIAE+SITIDDVV+V+DGGK KEK+
Sbjct:  546 VVTHISLHMEEGAILVFLPGWDDISKVHDKLKEEKMFSSDKFRIIPLHSMMPSTNQKEVFDRPPEGVRKIVIATNIAETSITIDDVVFVVDGGKVKEKT 644          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67952.14409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCZ3_ECTSI1.840e-5189.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9CM44_9STRA3.420e-4269.07Helicase C-terminal domain-containing protein n=1 ... [more]
I2CQV2_NANGC9.800e-3869.07ATP-dependent RNA helicase DHX36 n=2 Tax=Nannochlo... [more]
A0A7R9YF83_9STRA3.830e-3059.00Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S0MWB1_9CHLO4.900e-3064.95RNA helicase n=1 Tax=Pyramimonas obovata TaxID=141... [more]
A0A7C9ACT9_OPUST5.480e-3057.58Helicase C-terminal domain-containing protein (Fra... [more]
A0A7C9A9S9_OPUST1.140e-2958.59Uncharacterized protein (Fragment) n=1 Tax=Opuntia... [more]
A0A7S3FTI7_9CHLO1.410e-2951.43Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
UPI00077A3C861.510e-2859.60ATP-dependent RNA helicase DHX36-like n=1 Tax=Acro... [more]
UPI001CF2D9CA2.100e-2859.60ATP-dependent DNA/RNA helicase DHX36-like isoform ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..98
e-value: 3.0E-32
score: 113.5
NoneNo IPR availablePANTHERPTHR18934:SF213ATP-DEPENDENT RNA HELICASE DHX36coord: 2..98
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 2..98
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 7..91
e-value: 1.5E-13
score: 51.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..98
score: 11.121
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67952contigH-elongata_contig67952:396..1844 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67952.14409.1mRNA_H-elongata_contig67952.14409.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67952 395..1844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67952.14409.1 ID=prot_H-elongata_contig67952.14409.1|Name=mRNA_H-elongata_contig67952.14409.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
DLVQYIHACQGEGAILIFLSGWEEISAVHDKLEMLPQARQWRLYALHSQM
PTNQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVYVIDGGKHKEKS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase