prot_H-elongata_contig67947.14408.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig67947.14408.1
Unique Name	prot_H-elongata_contig67947.14408.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	117

Homology

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BLAST of mRNA_H-elongata_contig67947.14408.1 vs. uniprot
Match: D8LMH5_ECTSI (RmlD_sub_bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMH5_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 2.300e-58
Identity = 86/102 (84.31%), Postives = 91/102 (89.22%), Query Frame = 0

Query:    8 EYELREIEAIKPTHVLNAAGMTGRPNVDWCESHRPETIRANVIGTLNLADVCSSRGIHCTIYATGCIYEYDTEHPIGGKGFKEEDVPNFTGSFYSDTKGMVE 109
            E  L+E+E IKPTHVLNAAG+TGRPNVDWCESHRPETIRANVIGTLNLAD+CSS+ IHCTIYATGCIYEYD EH IGGKGF E D PNF  SFYSDTKGMVE
Sbjct:   41 ESVLKELETIKPTHVLNAAGVTGRPNVDWCESHRPETIRANVIGTLNLADLCSSKSIHCTIYATGCIYEYDAEHTIGGKGFLESDAPNFKASFYSDTKGMVE 142

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BLAST of mRNA_H-elongata_contig67947.14408.1 vs. uniprot
Match: A0A835Z517_9STRA (RmlD_sub_bind domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z517_9STRA)

HSP 1 Score: 187 bits (475), Expect = 5.560e-57
Identity = 83/103 (80.58%), Postives = 94/103 (91.26%), Query Frame = 0

Query:    8 EYELREIEAIKPTHVLNAAGMTGRPNVDWCESHRPETIRANVIGTLNLADVCSSRGIHCTIYATGCIYEYDTEHPIGGKGFKEEDVPNFTGSFYSDTKGMVEK 110
            E  +REI+ +KPTHVLNAAG+TGRPNVDWC+ H+PETIRANVIGTLNLADVCSSRGIHCT+YATGCI+EYD EH IGGKGF E+D+PNF GSFYS TKGMVE+
Sbjct:   44 ESMIREIDELKPTHVLNAAGVTGRPNVDWCDLHKPETIRANVIGTLNLADVCSSRGIHCTMYATGCIFEYDAEHTIGGKGFVEDDLPNFDGSFYSLTKGMVER 146

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BLAST of mRNA_H-elongata_contig67947.14408.1 vs. uniprot
Match: A0A6U1NBW8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NBW8_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.350e-51
Identity = 79/105 (75.24%), Postives = 88/105 (83.81%), Query Frame = 0

Query:    5 QPPEYELREIEAIKPTHVLNAAGMTGRPNVDWCESHRPETIRANVIGTLNLADVCSSRGIHCTIYATGCIYEYDTEHPIGGKGFKEEDVPNFTGSFYSDTKGMVE 109
            Q  E+  RE++ IKPT VL AAG+TGRPNVDWCESH+ ETIR NVIG LN+ADVC+SR IHCT+YATGCI+EYD EH IGGKGF EED PNF GSFYS TKGMVE
Sbjct:   41 QNREHLERELDEIKPTRVLCAAGVTGRPNVDWCESHKLETIRTNVIGALNIADVCNSRNIHCTLYATGCIFEYDAEHTIGGKGFTEEDKPNFDGSFYSATKGMVE 145

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BLAST of mRNA_H-elongata_contig67947.14408.1 vs. uniprot
Match: A0A448YU74_9STRA (RmlD_sub_bind domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU74_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.640e-50
Identity = 75/113 (66.37%), Postives = 90/113 (79.65%), Query Frame = 0

Query:    5 QPPEYELREIEAIKPTHVLNAAGMTGRPNVDWCESHRPETIRANVIGTLNLADVCSSRGIHCTIYATGCIYEYDTEHPIG-GKGFKEEDVPNFTGSFYSDTKGMVEKARVNSP 116
            Q  E   +E++ +KPTHV N+AG+TGRPN+DWCE+H+PETIR NVIGTLNLAD+C  RGIHCT+YATGCI+ YD  HP+G G GFKEED PNF GSFYS+TKG +E    N P
Sbjct:   46 QNREAVAKELDEVKPTHVFNSAGITGRPNIDWCETHKPETIRTNVIGTLNLADLCLERGIHCTVYATGCIFVYDEAHPLGSGIGFKEEDTPNFDGSFYSETKGYMEPMLRNYP 158

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BLAST of mRNA_H-elongata_contig67947.14408.1 vs. uniprot
Match: X0BFW6_FUSOX (dTDP-glucose 4,6-dehydratase n=5 Tax=Fusarium TaxID=5506 RepID=X0BFW6_FUSOX)

HSP 1 Score: 168 bits (425), Expect = 1.630e-49
Identity = 74/100 (74.00%), Postives = 85/100 (85.00%), Query Frame = 0

Query:   12 REIEAIKPTHVLNAAGMTGRPNVDWCESHRPETIRANVIGTLNLADVCSSRGIHCTIYATGCIYEYDTEHPIGGKGFKEEDVPNFTGSFYSDTKGMVEKA 111
            +E+E IKPTHVLNAAG TGRPNVDWCE ++ +T+R+NVIGTL LAD C+ RGIHCTI+ATGCIY+Y+  HPIGG GFKEED PNFT SFYS TKG VE A
Sbjct:   47 QELEKIKPTHVLNAAGCTGRPNVDWCEDNKAQTVRSNVIGTLTLADQCAQRGIHCTIFATGCIYQYNEAHPIGGPGFKEEDTPNFTRSFYSMTKGHVEPA 146

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BLAST of mRNA_H-elongata_contig67947.14408.1 vs. uniprot
Match: A0A1Y2X5I5_9PEZI (RmlD_sub_bind domain-containing protein n=4 Tax=Daldinia TaxID=42360 RepID=A0A1Y2X5I5_9PEZI)

HSP 1 Score: 167 bits (423), Expect = 3.270e-49
Identity = 73/98 (74.49%), Postives = 82/98 (83.67%), Query Frame = 0

Query:   13 EIEAIKPTHVLNAAGMTGRPNVDWCESHRPETIRANVIGTLNLADVCSSRGIHCTIYATGCIYEYDTEHPIGGKGFKEEDVPNFTGSFYSDTKGMVEK 110
            E++AIKPTHVLN AG TGRPNVDWCE H+ +TIR+NVIGTLNLAD C   GIHCT++ATGCIY YD  HPIGG GFKE D  NFTGSFYS+TKG VE+
Sbjct:   52 ELDAIKPTHVLNCAGCTGRPNVDWCEDHKEDTIRSNVIGTLNLADCCFVAGIHCTVFATGCIYHYDDAHPIGGPGFKETDPTNFTGSFYSETKGHVEE 149

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BLAST of mRNA_H-elongata_contig67947.14408.1 vs. uniprot
Match: A0A7R9WWB4_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WWB4_9STRA)

HSP 1 Score: 167 bits (423), Expect = 4.600e-49
Identity = 75/113 (66.37%), Postives = 88/113 (77.88%), Query Frame = 0

Query:    5 QPPEYELREIEAIKPTHVLNAAGMTGRPNVDWCESHRPETIRANVIGTLNLADVCSSRGIHCTIYATGCIYEYDTEHPIG-GKGFKEEDVPNFTGSFYSDTKGMVEKARVNSP 116
            Q  E   +E++ IKPTHVLNAAG+TGRPN+DWCE H+PET+R NVIGTLNLAD+C  R IHCT+YATGCI+ YD +HP G G GF EED PNF GSFYS+TKG +E    N P
Sbjct:   42 QNRESVAKELDEIKPTHVLNAAGITGRPNIDWCEDHKPETMRTNVIGTLNLADLCYERNIHCTVYATGCIFVYDEKHPEGSGIGFTEEDTPNFDGSFYSETKGYMEPMLKNYP 154

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BLAST of mRNA_H-elongata_contig67947.14408.1 vs. uniprot
Match: A0A812VJG1_SYMMI (NRS/ER protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VJG1_SYMMI)

HSP 1 Score: 162 bits (410), Expect = 5.310e-49
Identity = 70/103 (67.96%), Postives = 84/103 (81.55%), Query Frame = 0

Query:    8 EYELREIEAIKPTHVLNAAGMTGRPNVDWCESHRPETIRANVIGTLNLADVCSSRGIHCTIYATGCIYEYDTEHPIGGKGFKEEDVPNFTGSFYSDTKGMVEK 110
            E  LREIE  +PTH+LNAAG+TGRPNVDWCE HR ETIR+NVIG+L +AD+C  + IH T++ATGCI+EYD  HPIGG GF E+D PNF GS+YS TK MVE+
Sbjct:   44 ESVLREIEQYQPTHILNAAGVTGRPNVDWCEDHRAETIRSNVIGSLMIADICDEKNIHHTLFATGCIFEYDAAHPIGGPGFTEDDTPNFHGSYYSHTKAMVEE 146

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BLAST of mRNA_H-elongata_contig67947.14408.1 vs. uniprot
Match: X0I1E4_FUSOX (dTDP-glucose 4,6-dehydratase n=4 Tax=Fusarium TaxID=5506 RepID=X0I1E4_FUSOX)

HSP 1 Score: 166 bits (421), Expect = 5.870e-49
Identity = 72/98 (73.47%), Postives = 84/98 (85.71%), Query Frame = 0

Query:   12 REIEAIKPTHVLNAAGMTGRPNVDWCESHRPETIRANVIGTLNLADVCSSRGIHCTIYATGCIYEYDTEHPIGGKGFKEEDVPNFTGSFYSDTKGMVE 109
            +E++ I+PTHVLNAAG TGRPNVDWCE ++ +T+R+NVIGTL LAD C+  GIHCTI+ATGCIY+YD  HPIGG GFKEED PNFTGSFYS TKG VE
Sbjct:   47 KELQKIQPTHVLNAAGCTGRPNVDWCEDNKSQTVRSNVIGTLTLADRCAQLGIHCTIFATGCIYQYDETHPIGGPGFKEEDAPNFTGSFYSMTKGHVE 144

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BLAST of mRNA_H-elongata_contig67947.14408.1 vs. uniprot
Match: A0A699YME3_HAELA (Epimerase domain-containing protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YME3_HAELA)

HSP 1 Score: 168 bits (425), Expect = 7.270e-49
Identity = 77/106 (72.64%), Postives = 83/106 (78.30%), Query Frame = 0

Query:   11 LREIEAIKPTHVLNAAGMTGRPNVDWCESHRPETIRANVIGTLNLADVCSSRGIHCTIYATGCIYEYDTEHPIGGKGFKEEDVPNFTGSFYSDTKGMVEKARVNSP 116
            L EIE +KPTHVLNAAGMTGRPNVDWCE H+ ETIRANVIG LNLADVC+ +GIH T Y TGCI+ YD E  IGGKGFKE D PNFTGS+YS TK MVE      P
Sbjct:   66 LAEIERVKPTHVLNAAGMTGRPNVDWCEDHKVETIRANVIGCLNLADVCTQQGIHMTYYGTGCIFHYDDEFKIGGKGFKESDKPNFTGSYYSYTKAMVESLLKEYP 171

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig67947.14408.1 vs. uniprot

BLAST of mRNA_H-elongata_contig67947.14408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LMH5_ECTSI	2.300e-58	84.31	RmlD_sub_bind domain-containing protein n=2 Tax=Ec...	[more]
A0A835Z517_9STRA	5.560e-57	80.58	RmlD_sub_bind domain-containing protein n=1 Tax=Tr...	[more]
A0A6U1NBW8_9STRA	2.350e-51	75.24	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A448YU74_9STRA	1.640e-50	66.37	RmlD_sub_bind domain-containing protein n=1 Tax=Ps...	[more]
X0BFW6_FUSOX	1.630e-49	74.00	dTDP-glucose 4,6-dehydratase n=5 Tax=Fusarium TaxI...	[more]
A0A1Y2X5I5_9PEZI	3.270e-49	74.49	RmlD_sub_bind domain-containing protein n=4 Tax=Da...	[more]
A0A7R9WWB4_9STRA	4.600e-49	66.37	Hypothetical protein n=2 Tax=Craspedostauros austr...	[more]
A0A812VJG1_SYMMI	5.310e-49	67.96	NRS/ER protein n=1 Tax=Symbiodinium microadriaticu...	[more]
X0I1E4_FUSOX	5.870e-49	73.47	dTDP-glucose 4,6-dehydratase n=4 Tax=Fusarium TaxI...	[more]
A0A699YME3_HAELA	7.270e-49	72.64	Epimerase domain-containing protein n=1 Tax=Haemat...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 7..115 e-value: 3.1E-27 score: 97.7
None	No IPR available	PANTHER	PTHR10366:SF405	BIFUNCTIONAL DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE/DTDP-4-DEHYDRORHAMNOSE REDUCTASE	coord: 13..110
None	No IPR available	PANTHER	PTHR10366	NAD DEPENDENT EPIMERASE/DEHYDRATASE	coord: 13..110
IPR001509	NAD-dependent epimerase/dehydratase	PFAM	PF01370	Epimerase	coord: 14..110 e-value: 2.7E-8 score: 33.6
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 14..111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig67947	contig	H-elongata_contig67947:2023..3115 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig67947.14408.1	mRNA_H-elongata_contig67947.14408.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig67947 2023..3115 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig67947.14408.1 ID=prot_H-elongata_contig67947.14408.1|Name=mRNA_H-elongata_contig67947.14408.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp
MNLFQPPEYELREIEAIKPTHVLNAAGMTGRPNVDWCESHRPETIRANVI
GTLNLADVCSSRGIHCTIYATGCIYEYDTEHPIGGKGFKEEDVPNFTGSF
YSDTKGMVEKARVNSP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001509	Epimerase_deHydtase
IPR036291	NAD(P)-bd_dom_sf