prot_H-elongata_contig67936.14406.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67936.14406.1
Unique Nameprot_H-elongata_contig67936.14406.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length123
Homology
BLAST of mRNA_H-elongata_contig67936.14406.1 vs. uniprot
Match: D8LF83_ECTSI (Putative respiratory burst oxidase homolog protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF83_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 4.160e-37
Identity = 66/82 (80.49%), Postives = 76/82 (92.68%), Query Frame = 0
Query:    2 VETTLYYDNVLLICTGAGVTPALAVAERFSRKKNIHLMWIARDHGMMALFEKQLRLVNSTVHLTGKPTEEVKRAMSRLFSKS 83
            +ETTL+YDNVLLICTGAG+TPA+AVA+RF+ KKNIHLMWIARDHGMMALFEKQLR+V STVHLTG P EE+K AMS+L S+S
Sbjct:  421 IETTLFYDNVLLICTGAGITPAVAVADRFAAKKNIHLMWIARDHGMMALFEKQLRMVTSTVHLTGNPDEEIKDAMSKLLSRS 502          
BLAST of mRNA_H-elongata_contig67936.14406.1 vs. uniprot
Match: D7G8C4_ECTSI (Putative respiratory burst oxidase homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C4_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 9.210e-28
Identity = 49/86 (56.98%), Postives = 72/86 (83.72%), Query Frame = 0
Query:    2 VETTLYYDNVLLICTGAGVTPALAVAERFSRKKNIHLMWIARDHGMMALFEKQLRLVNSTVHLTGKPTEEVKRAMSRLFSKSKYTP 87
            +E ++Y++NV+++CTGAG+TPA+ +A+  S+KKN+HLMW++R+ GM+A FEKQLR VNSTVHLTGKPTE+ K+ ++ L + SK  P
Sbjct:  293 LEKSVYFENVIMVCTGAGITPAICLADMLSKKKNVHLMWLSREAGMVATFEKQLRRVNSTVHLTGKPTEKTKQRLTDLLAHSKAPP 378          
BLAST of mRNA_H-elongata_contig67936.14406.1 vs. uniprot
Match: A0A6H5JHI2_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI2_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.930e-27
Identity = 52/83 (62.65%), Postives = 68/83 (81.93%), Query Frame = 0
Query:    2 VETTLYYDNVLLICTGAGVTPALAVAERFSRKKNIHLMWIARDHGMMALFEKQLRLVNSTVHLTGKPTEEVKRAMSRLFSKSK 84
            +E T+Y++NVLL+CTGAG+TPA++VAERF +KKNIHL+W  RD GM+A+FEKQLR V STV LTGKPT + K+ M  L + S+
Sbjct:  550 MEKTVYFENVLLVCTGAGITPAVSVAERFQKKKNIHLLWCCRDAGMVAMFEKQLRRVKSTVFLTGKPTNKTKKRMVDLLAPSR 632          
BLAST of mRNA_H-elongata_contig67936.14406.1 vs. uniprot
Match: D7G8C8_ECTSI (Putative respiratory burst oxidase protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C8_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 1.930e-15
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    2 VETTLYYDNVLLICTGAGVTPALAVAERFSRKKNIHLMWIARDHGMMALFEKQLRLVNSTVHLTGKPTEEVKRAMSRLFSKSK 84
            VE T+Y+DN         ++ A+ +   F +KKNIHL+W  RD GM+A+FEKQLR V STV+LTGKPT + K+ M  L + S+
Sbjct:  538 VEKTMYFDNE------PSISEAIELEPVFQKKKNIHLLWCCRDAGMVAMFEKQLRRVKSTVYLTGKPTNKTKKRMVDLLAPSR 614          
BLAST of mRNA_H-elongata_contig67936.14406.1 vs. uniprot
Match: A0A6H5JAC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAC5_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 5.520e-8
Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 0
Query:   39 MWIARDHGMMALFEKQLRLVNSTVHLTGKPTEEVKRAMSRLFSKSKYTP 87
            MW++R+ GM+A FEKQLR V STVHLTGKPT++ K+ ++ L + S   P
Sbjct:    1 MWLSREAGMVATFEKQLRRVKSTVHLTGKPTDKTKQRLTDLLAHSSAPP 49          
BLAST of mRNA_H-elongata_contig67936.14406.1 vs. uniprot
Match: A0A7S4FLU6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FLU6_9EUGL)

HSP 1 Score: 58.9 bits (141), Expect = 1.250e-7
Identity = 24/70 (34.29%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    1 PVETTLYYDNVLLICTGAGVTPALAVAERFSRKKNIHLMWIARDHGMMALFEKQLRLVNST---VHLTGK 67
            P  T L +DN++L+ +G G+TPA+ V    ++ + ++L+W  RD G++  + +QL   NS    ++ TGK
Sbjct:  357 PYHTALEFDNIILVASGIGITPAIEVINHHAKTRKVNLVWSCRDPGLVQFYLEQLAFTNSAWNLIYYTGK 426          
BLAST of mRNA_H-elongata_contig67936.14406.1 vs. uniprot
Match: A0A1E7ER18_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER18_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.410e-5
Identity = 23/70 (32.86%), Postives = 40/70 (57.14%), Query Frame = 0
Query:    1 PVETTLYYDNVLLICTGAGVTPALAVAERFSRKKNIHLMWIARDHGMMALFEKQLRLVNSTVHL---TGK 67
            P    + +DN++L+ +G G+TPAL+  E     + I+L+W+ RD  M+  F +  +L    ++L   TGK
Sbjct:  401 PYNNAINFDNMILVASGIGITPALSAIEAHGDSRRINLIWVVRDASMLVFFLENAKLDEKGLNLIFYTGK 470          
BLAST of mRNA_H-elongata_contig67936.14406.1 vs. uniprot
Match: R1FV62_EMIHU (FAD-binding FR-type domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FV62_EMIHU)

HSP 1 Score: 52.0 bits (123), Expect = 3.270e-5
Identity = 23/79 (29.11%), Postives = 45/79 (56.96%), Query Frame = 0
Query:    1 PVETTLYYDNVLLICTGAGVTPALAVAERFSRKKNIHLMWIARDHGMMALFEKQLRLVN---STVHLTGKPTEEVKRAM 76
            P  T   YDN++L+ +G G+TPAL++   +  K+ ++L+W  RD  ++  +  + +      + ++ TGK   E+ RA+
Sbjct:  334 PYSTAGEYDNLILVASGIGITPALSLITTYKEKRRVNLIWSCRDASLVEFYLDKCQFSTDGWTLIYYTGKRQLELPRAL 412          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67936.14406.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LF83_ECTSI4.160e-3780.49Putative respiratory burst oxidase homolog protein... [more]
D7G8C4_ECTSI9.210e-2856.98Putative respiratory burst oxidase homolog n=1 Tax... [more]
A0A6H5JHI2_9PHAE1.930e-2762.65FAD-binding FR-type domain-containing protein n=1 ... [more]
D7G8C8_ECTSI1.930e-1548.19Putative respiratory burst oxidase protein n=1 Tax... [more]
A0A6H5JAC5_9PHAE5.520e-855.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4FLU6_9EUGL1.250e-734.29Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A1E7ER18_9STRA2.410e-532.86Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
R1FV62_EMIHU3.270e-529.11FAD-binding FR-type domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013121Ferric reductase, NAD binding domainPFAMPF08030NAD_binding_6coord: 8..58
e-value: 6.9E-8
score: 32.8
IPR039261Ferredoxin-NADP reductase (FNR), nucleotide-binding domainGENE3D3.40.50.80coord: 1..117
e-value: 1.6E-8
score: 36.6
IPR039261Ferredoxin-NADP reductase (FNR), nucleotide-binding domainSUPERFAMILY52343Ferredoxin reductase-like, C-terminal NADP-linked domaincoord: 7..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..123
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67936contigH-elongata_contig67936:489..2148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67936.14406.1mRNA_H-elongata_contig67936.14406.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67936 489..2149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67936.14406.1 ID=prot_H-elongata_contig67936.14406.1|Name=mRNA_H-elongata_contig67936.14406.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp
PVETTLYYDNVLLICTGAGVTPALAVAERFSRKKNIHLMWIARDHGMMAL
FEKQLRLVNSTVHLTGKPTEEVKRAMSRLFSKSKYTPAPMHAHFEPALAD
GVFDSNHSGGLRSILKSPRESTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013121Fe_red_NAD-bd_6
IPR039261FNR_nucleotide-bd