mRNA_H-elongata_contig67929.14404.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig67929.14404.1 vs. uniprot
Match: A0A6H5K5T8_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T8_9PHAE) HSP 1 Score: 249 bits (635), Expect = 7.360e-76 Identity = 124/225 (55.11%), Postives = 166/225 (73.78%), Query Frame = 1
Query: 28 KSGFPRIEVITLGFCIGTHFYALTNLYPYVGVMARDMMALDSINEAGFYAGYVASAFSFGRLMGGYATGYMSDKAGRKPVIILGLMATVIFSLSFGFSTNFAWAVSSRLVLGLLSGLAVVARVVVREVCGSRHVVVGMTYLNGAKAMALVLGTCIGGLLATPALHYPNVFSSTGLF-------------------ARYPFLLPNLVGAVVALVTLPMVIYWLPET 645
FP VI L + H YAL +L+PYVG+M D+++L+++NEAGFYAGYVASAF+FGR + GYA G+++D AGRKPVI+LGLM+ +IFSL+FG ST++AWAVSSRL+LGL +G+ RV + EVCG +HV+VGM YLN +A+++V+GT +GG+LA PA+HYP++FS+TGLF +RYPFLLPNLVGA ALV + +VI +LPET
Sbjct: 31 SDAFPTRLVIILALAMTVHSYALVSLFPYVGMMVSDLLSLETLNEAGFYAGYVASAFTFGRFLSGYAWGHVTDSAGRKPVIVLGLMSIIIFSLTFGLSTSYAWAVSSRLILGLTNGIMAALRVSLNEVCGPKHVLVGMNYLNSCRAISMVVGTGVGGVLAQPAVHYPSLFSATGLFGRWAKNPKRRRLRLMFFPRSRYPFLLPNLVGASCALVIMVLVIIYLPET 255
BLAST of mRNA_H-elongata_contig67929.14404.1 vs. uniprot
Match: D8LP17_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP17_ECTSI) HSP 1 Score: 221 bits (563), Expect = 4.010e-67 Identity = 113/205 (55.12%), Postives = 145/205 (70.73%), Query Frame = 1
Query: 31 SGFPRIEVITLGFCIGTHFYALTNLYPYVGVMARDMMALDSINEAGFYAGYVASAFSFGRLMGGYATGYMSDKAGRKPVIILGLMATVIFSLSFGFSTNFAWAVSSRLVLGLLSGLAVVARVVVREVCGSRHVVVGMTYLNGAKAMALVLGTCIGGLLATPALHYPNVFSSTGLFARYPFLLPNLVGAVVALVTLPMVIYWLPET 645
+ FP V+ L + T+ Y L+NL+PYVG M ++ L + NE+G+YAGYVAS+F+FGR + Y G +D GRKPV+I+GL + + S+ FG ST+FA AV SR VLGL +G+ R + REVCG HVV GM Y+ G+K + LV+GT IGGLLA PA YP VFS+TG+FARYPFLLPNLVGA ALV L +VI +LPET
Sbjct: 14 TAFPYRPVVILALVLTTNGYTLSNLFPYVGTMTMHLLGLSTTNESGYYAGYVASSFTFGRFLTAYVWGNAADTIGRKPVVIVGLSSIMACSVVFGLSTSFAMAVGSRFVLGLTNGIMPAVRTLTREVCGPEHVVSGMNYIAGSKGVGLVMGTAIGGLLAQPASTYPGVFSATGVFARYPFLLPNLVGAGFALVMLALVIVFLPET 218
BLAST of mRNA_H-elongata_contig67929.14404.1 vs. uniprot
Match: D8LET2_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET2_ECTSI) HSP 1 Score: 218 bits (554), Expect = 1.090e-66 Identity = 109/212 (51.42%), Postives = 146/212 (68.87%), Query Frame = 1
Query: 31 SGFPRIEVITLGFCIGTHFYALTNLYPYVGVMARDMMALDSINEAGFYAGYVASAFSFGRLMGGYATGYMSDKAGRKPVIILGLMATVIFSLSFGFSTNFAWAVSSRLVLGLLSGLAVVARVVVREVCGSR-HVVVGMTYLNGAKAMALVLGTCIGGLLATPALHYPNVFSSTGLFARYPFLLPNLVGAVVALVTLPMVIYWLPETLNTAET 663
S FP ++ L C H Y +L+PYVG MA++++ L+S N +GFYAGYVASA+ G + GY GY SD GRKPVI++GL+A + SL+FG ST + A+SSR VLG+++G+ R V EVC + HVV M Y++GAKA+ +V G+ +GGLL P HYPNVFS TGLF R+PFLLPNLVG +AL+ LP+VI +PET + +T
Sbjct: 16 STFPIRTIVVLALCAVVHSYTSISLFPYVGTMAKELLDLESTNTSGFYAGYVASAYMLGHFLSGYLWGYASDSVGRKPVILVGLLAVAVLSLTFGLSTTYELAISSRFVLGVMNGIMPAIRTTVYEVCTTNSHVVQAMAYIDGAKAVTIVFGSAMGGLLVQPVDHYPNVFSGTGLFGRFPFLLPNLVGVGLALLILPIVIACVPETKDFEDT 227
BLAST of mRNA_H-elongata_contig67929.14404.1 vs. uniprot
Match: D7G0M0_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M0_ECTSI) HSP 1 Score: 223 bits (568), Expect = 2.460e-66 Identity = 106/188 (56.38%), Postives = 146/188 (77.66%), Query Frame = 1
Query: 82 HFYALTNLYPYVGVMARDMMALDSINEAGFYAGYVASAFSFGRLMGGYATGYMSDKAGRKPVIILGLMATVIFSLSFGFSTNFAWAVSSRLVLGLLSGLAVVARVVVREVCGSRHVVVGMTYLNGAKAMALVLGTCIGGLLATPALHYPNVFSSTGLFARYPFLLPNLVGAVVALVTLPMVIYWLPET 645
+ YAL NL+PYVG + + ++ L+++NE GFYAGYVAS+F+FGR + GY G +D GRKPVII+GL++ IFS+ FG S ++ A+++R +LGL +G+ R + EVCG HVV+GMTY++G +A+++V+GT IGGLLA PALHYP VFS TGLFA YPFLLPNLVGAV+++ L +VI++LPET
Sbjct: 4 NMYALVNLFPYVGTLVKTLLKLETMNEVGFYAGYVASSFTFGRFLSGYVWGSATDIIGRKPVIIIGLLSITIFSMIFGMSETYSMAITTRFILGLTNGIMPALRTSLSEVCGPEHVVLGMTYISGTRAISMVIGTGIGGLLAQPALHYPTVFSPTGLFAMYPFLLPNLVGAVLSVFALFLVIFYLPET 191
BLAST of mRNA_H-elongata_contig67929.14404.1 vs. uniprot
Match: D7G0L9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L9_ECTSI) HSP 1 Score: 218 bits (556), Expect = 1.060e-65 Identity = 104/193 (53.89%), Postives = 149/193 (77.20%), Query Frame = 1
Query: 82 HFYALTNLYPYVGVMARDMMALDSINEAGFYAGYVASAFSFGRLMGGYATGYMSDKAGRKPVIILGLMATVIFSLSFGFSTNFAWAVSSRLVLGLLSGLAVVARVVVREVCGSRHVVVGMTYLNGAKAMALVLGTCIGGLLATPALHYPNVFSSTGLFARYPFLLPNLVGAVVALVTLPMVIYWLPETLNTAE 660
+ Y L NL+PY G M + +++LD+ NE GFYAGYVAS+F+FGR + GY G+++D+ GRKPVII+GL++ + FS+ FG S ++ A+++RLVLGL +G+ R + EVCG +HVV GMTY + A A++L+ GT IGGLLA PALHYP FS+TGLF R+PFLLPNL+GAV++++TL +++++LPET + E
Sbjct: 4 NIYMLVNLFPYSGTMVKHLLSLDT-NEVGFYAGYVASSFTFGRFLSGYFWGFVTDRLGRKPVIIMGLLSMITFSVLFGISRSYTMAITTRLVLGLTNGIMPALRTTLSEVCGKKHVVRGMTYTSAATAISLIFGTGIGGLLAQPALHYPGFFSATGLFGRFPFLLPNLMGAVMSVLTLILIVFFLPETKDYVE 195
BLAST of mRNA_H-elongata_contig67929.14404.1 vs. uniprot
Match: D8LRH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH9_ECTSI) HSP 1 Score: 200 bits (508), Expect = 8.880e-57 Identity = 98/211 (46.45%), Postives = 141/211 (66.82%), Query Frame = 1
Query: 13 KRFIPKSGFPRIEVITLGFCIGTHFYALTNLYPYVGVMARDMMALDSINEAGFYAGYVASAFSFGRLMGGYATGYMSDKAGRKPVIILGLMATVIFSLSFGFSTNFAWAVSSRLVLGLLSGLAVVARVVVREVCGSRHVVVGMTYLNGAKAMALVLGTCIGGLLATPALHYPNVFSSTGLFARYPFLLPNLVGAVVALVTLPMVIYWLPET 645
K+ + + FP + ++ + + +H YALT+L+PYVG M + + D +EAG+YAGYV+SAF GR+ Y G +D GR PVI GL + V+ S++FG ST+F WA+ R +LG+L+GL +++ + EVCG H GM Y+ G ++ LV+G +GGLLA PA HYP VFS +GLF R+P+LLPN+VGA +AL LP V ++L ET
Sbjct: 18 KQKMETTPFPWLPMLAIAIGLVSHSYALTSLFPYVGYMVQHLGVTDDKDEAGYYAGYVSSAFMVGRVGSSYFWGRFADSHGRLPVIYAGLTSMVVLSIAFGLSTSFLWALGCRFLLGVLNGLLGISKAMTSEVCGKEHEATGMAYVLGCASIGLVIGPGLGGLLAEPATHYPTVFSQSGLFGRFPYLLPNIVGAGIALTGLPFVFFFLKET 228
BLAST of mRNA_H-elongata_contig67929.14404.1 vs. uniprot
Match: A0A6H5L4Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q8_9PHAE) HSP 1 Score: 195 bits (495), Expect = 4.880e-56 Identity = 94/205 (45.85%), Postives = 137/205 (66.83%), Query Frame = 1
Query: 37 FPRIEVITLGFCIGTHFYALTNLYPYVGVMARDMMALDSINEAGFYAGYVASAFSFGRLMGGYATGYMSDKAGRKPVIILGLMATVIFSLSFGFSTNFAWAVSSRLVLGLLSGLAVVARVVVREVCGSRHVVVGMTYLNGAKAMALVLGTCIGGLLATPALHYPNVFSSTGLFARYPFLLPNLVGAVVALVTLPMVIYWLPETLN 651
FP + ++ L + +H Y+L++L+PYVG M + + D +EAG+YAGY+ASAF GR +D+ GR PV+ +GL + + SL+FG ST F WA++ R +LG ++GL +++ ++ E+CG +H VGM Y+ G + LV+G GGLLA PA HYPNVFS +GL+ RYP+LLPN+VGA +A LPMV ++L ET N
Sbjct: 37 FPWLPMLALAIGLVSHSYSLSSLFPYVGYMVQHLGVTDDKDEAGYYAGYLASAFMVGRFXXXXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNGLIAISKCMISEICGKQHEKVGMGYVTGCWSFGLVIGPAFGGLLAQPATHYPNVFSESGLYGRYPYLLPNVVGASIAFSGLPMVFFFLKETTN 241
BLAST of mRNA_H-elongata_contig67929.14404.1 vs. uniprot
Match: D8LRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH7_ECTSI) HSP 1 Score: 197 bits (502), Expect = 9.230e-56 Identity = 95/208 (45.67%), Postives = 138/208 (66.35%), Query Frame = 1
Query: 37 FPRIEVITLGFCIGTHFYALTNLYPYVGVMARDMMALDSINEAGFYAGYVASAFSFGRLMGGYATGYMSDKAGRKPVIILGLMATVIFSLSFGFSTNFAWAVSSRLVLGLLSGLAVVARVVVREVCGSRHVVVGMTYLNGAKAMALVLGTCIGGLLATPALHYPNVFSSTGLFARYPFLLPNLVGAVVALVTLPMVIYWLPETLNTAE 660
FP + ++ L + +H Y+L++L+PYVG M + + D +EAG+YAGY+ASAF GR +D+ GR PV+ +GL + + SL+FG ST F WA++ R +LG ++GL +++ ++ E+CG +H VGM Y+ G + LV+G GGLLA PA HYPNVFS +GLF RYP+LLPN+VGA +A LPMV ++L ET N +
Sbjct: 5 FPWLPMLALAIGLVSHSYSLSSLFPYVGYMVQHLGVADDKDEAGYYAGYLASAFMVGRFXXXXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNGLIAISKCMISEICGKQHETVGMGYITGCWSFGLVIGPAFGGLLAQPATHYPNVFSESGLFGRYPYLLPNVVGASIAFSGLPMVFFFLKETTNLGD 212
BLAST of mRNA_H-elongata_contig67929.14404.1 vs. uniprot
Match: A0A6H5KX19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX19_9PHAE) HSP 1 Score: 192 bits (487), Expect = 1.270e-53 Identity = 93/208 (44.71%), Postives = 137/208 (65.87%), Query Frame = 1
Query: 28 KSGFPRIEVITLGFCIGTHFYALTNLYPYVGVMARDMMALDSINEAGFYAGYVASAFSFGRLMGGYATGYMSDKAGRKPVIILGLMATVIFSLSFGFSTNFAWAVSSRLVLGLLSGLAVVARVVVREVCGSRHVVVGMTYLNGAKAMALVLGTCIGGLLATPALHYPNVFSSTGLFARYPFLLPNLVGAVVALVTLPMVIYWLPETLN 651
++ FP + ++ L + +H Y+ ++L+PYVG M + + D +EAG+YAG +ASAF GR +D+ GR PV+ +GL + + SL+FG ST F WA++ R +LG ++ L +++ ++ E+CG +H VGM Y+ G + LV+G GGLLA PA HYPNVFS +GLF RYP+LLPN+VGA +A LPMV ++L ETLN
Sbjct: 70 ETPFPWLPMLALAIGLVSHSYSFSSLFPYVGYMVQHLGVTDDRDEAGYYAGCLASAFMVGRFATSXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNALMGISKCMISEICGKQHETVGMGYVTGCSSFGLVIGPAFGGLLAQPATHYPNVFSESGLFGRYPYLLPNVVGASIAFSGLPMVFFFLKETLN 277
BLAST of mRNA_H-elongata_contig67929.14404.1 vs. uniprot
Match: D8LJK9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK9_ECTSI) HSP 1 Score: 185 bits (469), Expect = 3.680e-52 Identity = 94/171 (54.97%), Postives = 123/171 (71.93%), Query Frame = 1
Query: 154 INEAGFYAGYVASAFSFGRLMGGYATGYMSDKAGRKPVIILGLMATVIFSLSFGFSTNFAWAVSSRLVLGLLSGLAVVARVVVREVCGSR-HVVVGMTYLNGAKAMALVLGTCIGGLLATPALHYPNVFSSTGLFARYPFLLPNLVGAVVALVTLPMVIYWLPETLNTAET 663
I GFYAGYVA AF+ GR + GY GY+SD GR+PVI++GL AT + SL+FG ST + A+SSR VLG+++G+ R V EVCG+ HVV M Y++GA+A +V G+ +GGLL P HYP+VFS+TGLF R+PFLLPNLVG VAL+ LP VI ++PET + +T
Sbjct: 3 IPHTGFYAGYVAGAFTLGRFLSGYLWGYVSDSVGRRPVILVGLSATAVLSLTFGLSTTYEVAISSRFVLGIMNGITPAVRTTVYEVCGTNSHVVQAMAYIDGARASTIVFGSAMGGLLVQPVDHYPSVFSATGLFGRFPFLLPNLVGMGVALLLLPTVIAYVPETKDFEKT 173 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67929.14404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig67929.14404.1 >prot_H-elongata_contig67929.14404.1 ID=prot_H-elongata_contig67929.14404.1|Name=mRNA_H-elongata_contig67929.14404.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=221bp MSCAKRFIPKSGFPRIEVITLGFCIGTHFYALTNLYPYVGVMARDMMALDback to top mRNA from alignment at H-elongata_contig67929:1325..3261+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig67929.14404.1 ID=mRNA_H-elongata_contig67929.14404.1|Name=mRNA_H-elongata_contig67929.14404.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1937bp|location=Sequence derived from alignment at H-elongata_contig67929:1325..3261+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig67929:1325..3261+ >mRNA_H-elongata_contig67929.14404.1 ID=mRNA_H-elongata_contig67929.14404.1|Name=mRNA_H-elongata_contig67929.14404.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1326bp|location=Sequence derived from alignment at H-elongata_contig67929:1325..3261+ (Himanthalia elongata Himel1 dioecious)back to top |