prot_H-elongata_contig67908.14402.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67908.14402.1
Unique Nameprot_H-elongata_contig67908.14402.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length223
Homology
BLAST of mRNA_H-elongata_contig67908.14402.1 vs. uniprot
Match: D8LK31_ECTSI (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK31_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 1.370e-99
Identity = 152/230 (66.09%), Postives = 171/230 (74.35%), Query Frame = 0
Query:    1 RLVLREELALCAQFLELDGRNFHCWAHRMWVAEVMGLSAEEDFDFTTAKIKQNFSNYSAFHFRSKLLPRMIGEASRDPWQLLSDELELAHDAMFTEPADQSVWWYHQFLLTWAKESVAG-RDPERYEKILRTEASTLKELIEVEGRCKWAELALLLVTQRLVKSIDG------VTENASPTASGECWVEGERSPEAVHLLESCSGMASRLAELDPMHAKFYEFVNRGGSV 223
            R  L  +LALCA FLELDGRNFHCWAHRMWVAE MGLSA E+FDFTT KIKQNFSNYSAFHFRSK+LPRM+ EA  D WQLLSDEL+L HDAMFTEPADQSVWWYH FLLTWA +      D ERYE ILR EA+TL ELIEVE RCKWAE+ALLLV+QRL  +++         +             G  S EA  + ESC GMA+RL+ELDPMH +FYEFV +GG+V
Sbjct:  155 RSALAGDLALCATFLELDGRNFHCWAHRMWVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGTDSCSDSERYENILRAEAATLGELIEVEVRCKWAEVALLLVSQRLANALEPRPQPPRAQDXXXXXXXXXVTAAGNGSTEAGEVRESCRGMAARLSELDPMHGRFYEFVEKGGTV 384          
BLAST of mRNA_H-elongata_contig67908.14402.1 vs. uniprot
Match: A0A835Z1Z5_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z5_9STRA)

HSP 1 Score: 185 bits (470), Expect = 4.380e-54
Identity = 99/213 (46.48%), Postives = 128/213 (60.09%), Query Frame = 0
Query:    5 REELALCAQFLELDGRNFHCWAHRMWVAEVMGLSAEEDFDFTTAKIKQNFSNYSAFHFRSKLLPRMI-GEASRDPWQLLSDELELAHDAMFTEPADQSVWWYHQFLLTWAKESVAGRDP-ERYEKILRTEASTLKELIEVEGRCKWAELALLLVTQRLVKSIDGVTENASPTASGECWVEGERSPEAVHLLESCSGMASRLAELDPMHAKFYE 215
            R EL LC QFL LD RNFHCWA+R WV E  GLSAEEDF FTT KI +NFSNYSAFH+RSKLLP +     +     L+  ELE+ H A FTEP DQS WWYH+FL+ WA E++ G +  ++Y ++L+ E   ++EL+ VE RCKWA     LVT  L   +  +   A  T             E V L+     + + L ++DPMH  +Y+
Sbjct:  142 RRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCKWA-----LVT--LHHLLCALARTAQDT-------------EGVELMAEARSLVTTLVDVDPMHKSYYD 334          
BLAST of mRNA_H-elongata_contig67908.14402.1 vs. uniprot
Match: M4C4N4_HYAAE (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4N4_HYAAE)

HSP 1 Score: 137 bits (344), Expect = 1.160e-35
Identity = 81/214 (37.85%), Postives = 119/214 (55.61%), Query Frame = 0
Query:    4 LREELALCAQFLELDGRNFHCWAHRMWVAEVMGLSAEEDFDFTTAKIKQNFSNYSAFHFRSKLLPRMIGEASRDPWQLLSDELELAHDAMFTEPADQSVWWYHQFLLTWAKESVAGRDPERYEKILRTEASTLKELIEVEGRCKWAELALLLVTQRL--VKSIDGVTENASPTASGECWVEGERSPEAVHLLESCSGMASRLAELDPMHAKFYE 215
            L++E+ LC + L+LD RNFHCW +R  V E+ G+S  +   FTT KI+QNFSNYSA H RS +LP  I         +LS E+EL   A+FTEP DQS W+Y+++LLT +   +    PE     L+T+   L++L+E+E   KW  + L  V  R+  + S+DG             W + ++  ++  L E       R  +LDP H ++YE
Sbjct:  114 LKKEIGLCDKLLDLDERNFHCWNYRRHVCEMAGVSKTDQLAFTTKKIEQNFSNYSALHHRSTVLPEPITV------DVLSSEIELVQQAVFTEPDDQSAWFYYRWLLT-SMLDLMESSPEDAAGFLKTQVQWLEQLLEMEKDAKWVVVTLADVRGRVGAMTSVDG-------------WQDSKK--QSAELYE-------RAIKLDPSHRRYYE 298          
BLAST of mRNA_H-elongata_contig67908.14402.1 vs. uniprot
Match: UPI000644DC6F (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644DC6F)

HSP 1 Score: 135 bits (339), Expect = 7.470e-35
Identity = 71/151 (47.02%), Postives = 99/151 (65.56%), Query Frame = 0
Query:    7 ELALCAQFLELDGRNFHCWAHRMWVAEVMGLSAEEDFDFTTAKIKQNFSNYSAFHFRSKLLPRMIGEASRDPWQL---LSDELELAHDAMFTEPADQSVWWYHQFLLTWAKESVAGRDPERYEKILRTEASTLKELIEVEGRCKWAELALL 154
            EL LC++ L+LD RNFHCW++R +V E  GL  E+++ +TT KI+QNFSNYSA+H RS L+P M    + +P QL   L +E EL  +A+FTEP DQS W YH++L+   K ++ G D   Y+++   E   + ELIE+E  CKW    LL
Sbjct:  128 ELKLCSKLLDLDLRNFHCWSYRRFVGEKSGLPLEKEYAYTTTKIEQNFSNYSAWHQRSALIPLM----NTEPQQLFEKLKEEFELVRNAVFTEPKDQSSWIYHKWLVGTMK-AIPGCD---YKEVFNAEVEAINELIEIEPDCKWPIYTLL 270          
BLAST of mRNA_H-elongata_contig67908.14402.1 vs. uniprot
Match: A0A0P1AIP1_PLAHL (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIP1_PLAHL)

HSP 1 Score: 134 bits (337), Expect = 3.690e-34
Identity = 82/216 (37.96%), Postives = 117/216 (54.17%), Query Frame = 0
Query:    4 LREELALCAQFLELDGRNFHCWAHRMWVAEVMGLSAEEDFDFTTAKIKQNFSNYSAFHFRSKLLPRMIGEASRDPWQLLSDELELAHDAMFTEPADQSVWWYHQFLLTWAKESVAGRDPERYEKILRTEASTLKELIEVEGRCKWAELALLLVTQRLVKSIDGVTENASPTASGECWVEGERSPEAVHLLESCSGMASRLAELDPMHAKFYEFVNR 219
            L++E+ LC + L LD RNFHCW +R  V E+  +  E+   FTT KI+QNFSNYSA H RS  LP+ +        +++ DE+EL   A+FTEP DQS W+Y+++L+T   E V     E   + L+ +A  L+EL+E+E   KWA + L  +  RL     GV  N         W E +     VH L+    +  R   LDP H  +Y+ + R
Sbjct:  129 LQKEIGLCDKLLNLDERNFHCWNYRRHVCELANVPKEDQLAFTTQKIEQNFSNYSALHHRSINLPKPLTA------EVIFDEIELIQQAVFTEPDDQSAWFYYRWLVTSMVELVKS-SAENAVEFLKKQAQWLEELVEMEAEAKWAIVTLADICGRL-----GVIINVGG------WEEAK-----VHCLD----LYDRAIALDPDHRSYYDDMKR 317          
BLAST of mRNA_H-elongata_contig67908.14402.1 vs. uniprot
Match: A0A0M0JE27_9EUKA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JE27_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 3.190e-33
Identity = 72/175 (41.14%), Postives = 99/175 (56.57%), Query Frame = 0
Query:    7 ELALCAQFLELDGRNFHCWAHRMWVAEVMGLSAEEDFDFTTAKIKQNFSNYSAFHFRSKLLPRMIGEASRDP----WQLLSDELELAHDAMFTEPADQSVWWYHQFLLTW-AKESVAGRDPERYEKILRTEASTLKELIEVEGRCKWAELALLLVTQRLVKSIDGVTENASPTAS 176
            EL L A+ L LD RNFHCW +R  V  V G++AE +  FTT KI+ NFSNYSA+H+RSKLLP +   A  +       +L +ELEL  +A FT P D S W+YH++L+   A  + A   P  +E ++R E   + EL+E+E  CKW   A   + + L     G  E     A+
Sbjct:  127 ELKLTAKLLALDDRNFHCWTYRRNVVRVAGVTAEAELAFTTTKIQANFSNYSAWHYRSKLLPAVHASAGAEGAAQLGAVLRNELELVRNAFFTAPEDSSAWFYHRWLIAQLAPGAAAALPPAEFEALVRAELQMVDELLELEPECKWPLAAAAFLGRTLDTHQMGSEETTGAAAT 301          
BLAST of mRNA_H-elongata_contig67908.14402.1 vs. uniprot
Match: A0A8K1CD87_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD87_PYTOL)

HSP 1 Score: 130 bits (326), Expect = 8.310e-33
Identity = 75/211 (35.55%), Postives = 115/211 (54.50%), Query Frame = 0
Query:    4 LREELALCAQFLELDGRNFHCWAHRMWVAEVMGLSAEEDFDFTTAKIKQNFSNYSAFHFRSKLLPRMIGEASRDPWQLLSDELELAHDAMFTEPADQSVWWYHQFLLTWAKESVAGRDPERYEKILRTEASTLKELIEVEGRCKWAELALLLVTQRLVKSIDGVTENASPTASGECWVEGERSPEAVHLLESCSGMASRLAELDPMHAKFY 214
            L++E+ALC + L+LD RNFHCW +R  V ++ G+S E++  F T KI+QNFSNYSA H RS  LP+ +        ++L DE+ +   A+FTEP DQS W+Y+++L+T +   V   +P    + L ++   L EL+E+E   KW  + L  + +RL  S+    + AS                A    E       +L  +DP HA++Y
Sbjct:  134 LKKEIALCNRLLDLDERNFHCWNYRRHVCQLAGVSREDELAFATLKIEQNFSNYSALHHRSITLPKPLTR------EILHDEIGIVQQAVFTEPDDQSAWFYYRWLVT-SMLDVVQSEPSEAVEFLDSQIQWLLELLEMESEAKWVLVTLADLQRRL--SVAQTEDEAS----------------ASQAKEQSRVYYKQLLSVDPDHAQYY 319          
BLAST of mRNA_H-elongata_contig67908.14402.1 vs. uniprot
Match: A0A060T808_BLAAD (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T808_BLAAD)

HSP 1 Score: 130 bits (326), Expect = 8.660e-33
Identity = 77/216 (35.65%), Postives = 113/216 (52.31%), Query Frame = 0
Query:    7 ELALCAQFLELDGRNFHCWAHRMWVAEVMGLS-----AEEDFDFTTAKIKQNFSNYSAFHFRSKLLPRMIGEASRDPWQLLSDELELAHDAMFTEPADQSVWWYHQFLLTWAKESVAGRDPERYEKILRTEASTLKELIEVEGRCKWAELALLLVTQRLVKSIDGVTENASPTASGECWVEGERSPEAVHLLESCSGMASRLAELDPMHAKFYEFV 217
            ELA+ ++ LELD RNFH W +R +V   +  S      + +FD+TT+KI  NFSN+SA+H R+KL+PR++ E  +DP +LL  ELE    A++T+P DQS W YH++LL+   + V         KI+  E  +++EL E+E   KW   AL+   Q L K                     E  P     L+      S+L + DPM    Y++V
Sbjct:  128 ELAIVSKMLELDSRNFHGWHYRRYVVGELEKSHDNSLVKSEFDYTTSKINANFSNFSAWHQRAKLIPRLLKETGQDPRELLYSELEYIRQALYTDPDDQSSWIYHRWLLS-TDQIVPDLSANERAKIITNEIKSIEELDEIEPDNKWCMDALVFYGQLLAKV--------------------ESRPLTAEELDQARKRLSKLKQTDPMRKNRYQYV 322          
BLAST of mRNA_H-elongata_contig67908.14402.1 vs. uniprot
Match: A0A151ZSE4_9MYCE (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZSE4_9MYCE)

HSP 1 Score: 129 bits (324), Expect = 1.220e-32
Identity = 67/150 (44.67%), Postives = 98/150 (65.33%), Query Frame = 0
Query:    7 ELALCAQFLELDGRNFHCWAHRMWVAEVMGLSAEEDFDFTTAKIKQNFSNYSAFHFRSKLLPRMIGEASRDPWQLLSDELELAHDAMFTEPADQSVWWYHQFLLTWAKESVAGRDPERYEKILRTEASTLKELIEVEGRCKWAELALLLV 156
            EL LC++ L+LD RNFHCW++R ++ +  G+   ++FD+TT KI+QNFSNYSA+H RS LL ++  E S +    L +ELE   +A++TEP DQS W YH++L    K  VA  +   Y+ IL++E   + EL+E+E  CKW     LL+
Sbjct:  130 ELKLCSKLLDLDLRNFHCWSYRRFILKHSGIPLTQEFDYTTKKIEQNFSNYSAWHQRSSLLTKIYTEPS-ELASKLKEELEWVRNAVYTEPKDQSSWVYHKWLTGTLKPIVATTE---YKDILKSELGPITELMELEPDCKWPLYISLLL 275          
BLAST of mRNA_H-elongata_contig67908.14402.1 vs. uniprot
Match: F4PXZ6_CAVFA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PXZ6_CAVFA)

HSP 1 Score: 127 bits (320), Expect = 4.540e-32
Identity = 66/154 (42.86%), Postives = 96/154 (62.34%), Query Frame = 0
Query:    7 ELALCAQFLELDGRNFHCWAHRMWVAEVMGLSAEEDFDFTTAKIKQNFSNYSAFHFRSKLLPRMIGEASRDPWQLLSDELELAHDAMFTEPADQSVWWYHQFLLTWAKESVAGRDPERYEKILRTEASTLKELIEVEGRCKWAELALLLVTQRL 160
            EL LC + L+LD RNFHCW++R +V E  G+  E++F +TT KI+QNFSNYSA+H RS L+P+M  +  +  ++ L +E E   +A+FTEP DQS W YH++L+   K+         Y+ +L +E   +  LIE+E  CKW    LL +   L
Sbjct:  128 ELKLCYKLLDLDLRNFHCWSYRRFVEERSGMPMEKEFGYTTEKIEQNFSNYSAWHQRSSLIPQMYPQPEQ-LFEKLKEEFEWVRNAVFTEPKDQSCWIYHKWLVGTIKKIPNCN----YKDVLLSEVDEINGLIEIEPDCKWPIYTLLTLKMEL 276          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67908.14402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK31_ECTSI1.370e-9966.09Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A835Z1Z5_9STRA4.380e-5446.48Geranylgeranyl transferase type-2 subunit alpha n=... [more]
M4C4N4_HYAAE1.160e-3537.85Geranylgeranyl transferase type-2 subunit alpha n=... [more]
UPI000644DC6F7.470e-3547.02hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A0P1AIP1_PLAHL3.690e-3437.96Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A0M0JE27_9EUKA3.190e-3341.14Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A8K1CD87_PYTOL8.310e-3335.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A060T808_BLAAD8.660e-3335.65Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A151ZSE4_9MYCE1.220e-3244.67Geranylgeranyl transferase type-2 subunit alpha n=... [more]
F4PXZ6_CAVFA4.540e-3242.86Geranylgeranyl transferase type-2 subunit alpha n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.120coord: 2..220
e-value: 2.0E-53
score: 183.6
NoneNo IPR availablePANTHERPTHR11129PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNITcoord: 5..215
NoneNo IPR availableSUPERFAMILY48439Protein prenylyltransferasecoord: 3..217
IPR002088Protein prenyltransferase, alpha subunitPFAMPF01239PPTAcoord: 43..68
e-value: 1.1E-5
score: 25.0
coord: 85..112
e-value: 9.3E-6
score: 25.2
coord: 7..31
e-value: 1.7E-7
score: 30.7
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 38..72
score: 11.461
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 3..37
score: 14.523
IPR002088Protein prenyltransferase, alpha subunitPROSITEPS51147PFTAcoord: 81..115
score: 12.319
IPR032955Geranylgeranyl transferase type-2 subunit alphaPANTHERPTHR11129:SF2GERANYLGERANYL TRANSFERASE TYPE-2 SUBUNIT ALPHAcoord: 5..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67908contigH-elongata_contig67908:43..2096 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67908.14402.1mRNA_H-elongata_contig67908.14402.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67908 43..2096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67908.14402.1 ID=prot_H-elongata_contig67908.14402.1|Name=mRNA_H-elongata_contig67908.14402.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=223bp
RLVLREELALCAQFLELDGRNFHCWAHRMWVAEVMGLSAEEDFDFTTAKI
KQNFSNYSAFHFRSKLLPRMIGEASRDPWQLLSDELELAHDAMFTEPADQ
SVWWYHQFLLTWAKESVAGRDPERYEKILRTEASTLKELIEVEGRCKWAE
LALLLVTQRLVKSIDGVTENASPTASGECWVEGERSPEAVHLLESCSGMA
SRLAELDPMHAKFYEFVNRGGSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002088Prenyl_trans_a
IPR032955RabGGTase_alpha