prot_H-elongata_contig6789.14400.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig6789.14400.1
Unique Name	prot_H-elongata_contig6789.14400.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	542

Homology

[Close]

BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: A0A6H5JN78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN78_9PHAE)

HSP 1 Score: 584 bits (1505), Expect = 1.750e-202
Identity = 389/576 (67.53%), Postives = 417/576 (72.40%), Query Frame = 0

Query:    1 MADDERDAYQDADPGATGCKTLWLGDVQPDWTEEYVESLFSSI-GQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTGIQGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKSGRADRDRERERAVDVHAGLPGMGANIIQPSTSPAAAAA------VRSAQFSGLYGHPPSYAAYGSNFPANIFSATGMYSGAATGYAPTQQTAGLQQ--AAQTPSQLPQQHQPQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYSPHSFAPFQGFGFQQFPGQAAAAAYAGFAAGNAAAYADPSGLATDLSQLSLSTNNAATIGVGGVVGAGGRPTRLGASRGG--------------VYAPTTRAGPG------------PAFSLQDGRKGGAGPASRN 541
            MADD++  YQD +  A   KTLWLGDVQPDWTEEYVESLFS I G+ELEVKLIRDRHRGIVAGYGFIDFRNHETA+ VL++LNGKPIEGTSLRYRLNWGAGGKRIEQ PEYSVFVGDLSPEVTDA+LK+TFL K+ SVLGAKVVTNPMTGSSKSFGFIRFGDE+ERDEALT+MNGAECCGRPIRVAPATKRT +QGQTGAHATDPSNTTVFVGGINDSVTEKVLR+TF  AGEIQTVTTPPGRGCAFVTF HR SAEHVINNMQG T+CGSCVRLSWGKSGRADRDRERERA     G P MG   IQ  +SP A          R A FSGLYGHP SYA++   +PANIF A  +Y GA     P QQ  GL    AA T  QLPQ             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        P+QGFGFQQ+P Q  AA Y  F   NAA   DPS LA DLSQLSLS   A+ +G                                  +Y P +R+G              P+FSLQD RKGG GPASRN
Sbjct:    1 MADDQQ--YQDENRSAA--KTLWLGDVQPDWTEEYVESLFSGIVGKELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDAELKATFLDKYASVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVTEKVLRETFNSAGEIQTVTTPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSCVRLSWGKSGRADRDRERERA----GGDPIMGMGGIQ--SSPTAXXXXXXXXXARGAPFSGLYGHPQSYASFNGAYPANIFPAGAVYGGAYP--QPGQQQPGLPPPAAAGTGQQLPQ------------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYQGFGFQQYPAQQQAA-YTSFNGNNAAYAQDPSALANDLSQLSLSGGAASAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYGPASRSGXXXXXXXXXXXXXXPSFSLQDVRKGGLGPASRN 551

[Close]

BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: D7FKJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKJ7_ECTSI)

HSP 1 Score: 545 bits (1405), Expect = 4.150e-189
Identity = 289/368 (78.53%), Postives = 308/368 (83.70%), Query Frame = 0

Query:    1 MADDERDAYQDADPGATGCKTLWLGDVQPDWTEEYVESLFSSI-GQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTGIQGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKSGRADRDRERERAVDVHAGLPGMGANIIQPSTSPAAAAA------VRSAQFSGLYGHPPSYAAYGSNFP-----ANIFSATGMYSGAAT 356
            MADD++  YQD +  A   KTLWLGDVQPDWTEEYVESLFSSI GQELEVKLIRDRHRGIVAGYGFIDFRNHETA+ VL++LNGKPIEGTSLRYRLNWGAGGKRIEQ PEYSVFVGDLSPEVTDA+LK+TFL K+ SVLGAKVVTNPMTGSSKSFGFIRFGDE+ERDEALT+MNGAECCGRPIRVAPATKRT +QGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTF  AGEIQTVTTPPGRGCAFVTF HR SAEHVINNMQG T+CGSCVRLSWGKSGRADRDRERERA     G P MG   IQ  +SP A          R A FSGLYGHP SYA++   +P     AN  S   +  GAA+
Sbjct:    1 MADDQQ--YQDENRSAA--KTLWLGDVQPDWTEEYVESLFSSIVGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDAELKATFLGKYTSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFNSAGEIQTVTTPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSCVRLSWGKSGRADRDRERERA----GGDPIMGMGGIQ--SSPTAXXXXXXXXXARGAPFSGLYGHPQSYASFNGAYPDPSALANDLSQLSLSGGAAS 358

[Close]

BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: W7TLC3_9STRA (Nuclear acid binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLC3_9STRA)

HSP 1 Score: 297 bits (761), Expect = 3.850e-90
Identity = 164/323 (50.77%), Postives = 201/323 (62.23%), Query Frame = 0

Query:   19 CKTLWLGDVQPDWTEEYVESLFSSIGQE----LEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPAT--KRTGIQG-------QTGAHAT----------------DPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKSGRADRDRERERAVDVH-------AGLPGMGANI 305
            CKTLW+GD+QP W E YV S+F++ G E    +EVKLIRD+H G  AGYGF++F   E A+ VLET NG  I GT  R+RLNWGAGGKR+E  PE+S+FVGDL+PEVTD  L+  FL KF S LGAKVV +P++G SK FGF+RF +E E++EAL++M G  C GR IRVAPAT  K  G  G         G HA+                DP NTTVFVGGI+  VTE VLR+ F+  G+I  V  PPGRGC FV + +R SAE  I  MQG  + G  VRLSWG+S  A  +  R   +          AG P M A +
Sbjct:    8 CKTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAKKAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRSSPARAEGRRMGGMGXXXXXXMGMAGYPAMYATV 330

[Close]

BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: H3G796_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G796_PHYRM)

HSP 1 Score: 269 bits (688), Expect = 1.900e-83
Identity = 135/263 (51.33%), Postives = 178/263 (67.68%), Query Frame = 0

Query:   19 CKTLWLGDVQPDWTEEYVESLFSSIGQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTGIQGQT--GAHATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKS 279
            CKTLW+GD+Q  W E ++ SLF+S  ++  VKLIRD+  G  AGYGF++F     A+ VLET NG+ I  T  R+R+NWGAGG+RIE   ++S+FVGDL+P+V D  L STF ++F SV GAKVV +P+T  SK FGF+RFG + E D+AL +MNG  C  RP+RV+ AT+R   +     GA   + +NTTVFVGG++ S TE  LR  F   GEI +V  PPGRGC FV +T + +AE  I+ M G  ICG  VR +WG+S
Sbjct:    2 CKTLWMGDIQMHWDEAFISSLFASAAEQPVVKLIRDKVTGYPAGYGFLEFPTQLGAQQVLETFNGQLIPNTMHRFRMNWGAGGRRIETSDDHSIFVGDLAPDVGDELLLSTFNSRFSSVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATERNKARQMPSFGAAEEEGANTTVFVGGLDPSTTEDELRARFGALGEIVSVKVPPGRGCGFVQYTSKEAAEVAISQMNGTVICGVKVRCAWGRS 264

[Close]

BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: A0A8K1CQ96_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQ96_PYTOL)

HSP 1 Score: 272 bits (696), Expect = 1.780e-82
Identity = 135/269 (50.19%), Postives = 182/269 (67.66%), Query Frame = 0

Query:   19 CKTLWLGDVQPDWTEEYVESLFSSIGQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRT--------GIQGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKS 279
            CKTLW+GD+QP W E ++ SLF+S  +   VKLIRD+  G  +GYGF++F+  + A++VLE  NG+ I  T  R+R+NWGAGG+R+E   ++S+FVGDL+P+VTD  L STF A+F SV  AKVVT+P+T  SK FGF+RFG + E D+AL +MNG  C  RP+RV+ AT R         G+ G  G    + +NTTVF+GG++ + TE+ LR  FA  GE+ +V  PPGRGC FV +  R SAE  IN M G  I GS +R +WG+S
Sbjct:    5 CKTLWMGDIQPHWDEAFIGSLFASCSEIPVVKLIRDKVTGYPSGYGFLEFQTQQGAQYVLENFNGQVIPNTMHRFRMNWGAGGRRLETGEDHSIFVGDLAPDVTDELLLSTFAARFASVRNAKVVTDPLTRMSKGFGFVRFGAKEEADQALQTMNGVYCSSRPMRVSVATDRNAGRPRQDFGMPGMVGVVDAEGANTTVFIGGLDANTTEEDLRARFAPFGEMVSVKVPPGRGCGFVHYITRDSAEMAINQMNGALINGSKIRCAWGRS 273

[Close]

BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: A0A2D4BYT1_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYT1_PYTIN)

HSP 1 Score: 268 bits (685), Expect = 8.800e-81
Identity = 134/270 (49.63%), Postives = 179/270 (66.30%), Query Frame = 0

Query:   19 CKTLWLGDVQPDWTEEYVESLFSSIGQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRT-------GI-QGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKSG 280
            CKTLW+GD+QP W E ++ SLF+S  ++  VKLIRD+  G  +GY F++F +   A+ VLE  NG+ +  T  R+R+NWGAGG+RIE P ++SVFVGDL+P+VTD  L +TF  +F SV  AKVVT+P+T +SK FGF+RFG + E D+AL +MNG  C  RP+RV+ AT R        G  QG TG    D  NTTVF+GG++ S  E  LR  FA  GEI +V  PPGRGC FV +  + SAE  I+ + G  + G  +R +WG+SG
Sbjct:    5 CKTLWMGDIQPQWDEAFIGSLFASCSEQPVVKLIRDKVTGYPSGYCFLEFPSQRGAQXVLENFNGQAVPNTMHRFRMNWGAGGRRIETPEDHSVFVGDLAPDVTDXVLMNTFATRFASVRSAKVVTDPITRTSKGFGFVRFGVKEEADQALQTMNGVYCSSRPMRVSVATDRNRNRNEYGGFPQGPTGVPDADAPNTTVFIGGLDASTAEDELRARFAPFGEITSVRIPPGRGCGFVHYVSKESAEMAISQLNGAVVGGVKIRCAWGRSG 274

[Close]

BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: A0A484DTT9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTT9_BRELC)

HSP 1 Score: 267 bits (682), Expect = 1.330e-80
Identity = 134/266 (50.38%), Postives = 179/266 (67.29%), Query Frame = 0

Query:   19 CKTLWLGDVQPDWTEEYVESLFSSIGQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTGIQGQT--GAHATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKSGRA 282
            CKTLW+GD+Q  W E Y+ SLF+S  ++  VKLIRD+  G  AGYGF++F   + A+ +L+T NG+ I  T  R+R+NWGAGG+RIE   ++S+FVGDLSP+V+D  L STF A+F +V GAKVV +P+T  SK FGF+RFG + E D+AL +MNG  C  RP+RV+ AT+R   + Q        D +NTTVFVGG++ S TE+ LR  F   GEI +V  PPGRGC FV +T + +AE  I  M G  + G  VR +WG+S  A
Sbjct:    5 CKTLWMGDIQMHWDEAYIVSLFASASEQPVVKLIRDKVTGYPAGYGFLEFPTQQGAQEILDTFNGQLIPNTLHRFRMNWGAGGRRIETSDDHSIFVGDLSPDVSDDLLLSTFSARFSTVRGAKVVMDPITRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATERNKARQQAVFSMGEEDGANTTVFVGGLDPSTTEEELRARFGALGEIVSVKVPPGRGCGFVQYTTKEAAEIAILQMNGSVVSGVKVRCAWGRSAAA 270

[Close]

BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: A0A0P1A6W8_PLAHL (Nuclear acid binding n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6W8_PLAHL)

HSP 1 Score: 266 bits (680), Expect = 2.560e-80
Identity = 134/268 (50.00%), Postives = 180/268 (67.16%), Query Frame = 0

Query:   17 TGCKTLWLGDVQPDWTEEYVESLFSSIGQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTGIQGQTGAHAT--DPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKSGRA 282
            T CKTLW+GD+Q  W E ++ SLF+S  ++  VKLIRD+  G  AGYGF++F     A+ VLET NG+ I  T  R+R+NWGAGG+RIE   ++S+FVGDL+P+V D  L STF A+F +V GAKVV +P+T  SK FGF+RFG + E D+AL +MNG  C  RP+RV+ AT+R   + Q G   +  D +NTTVFVGG++   +E+ LR  F   GEI +V  PPGRGC FV +T + +AE  I+ M G  + G  VR +WG+S  A
Sbjct:    3 TECKTLWMGDIQMHWDETFIVSLFASAAEQPIVKLIRDKVTGYPAGYGFLEFPTQRGAQQVLETFNGQLIPNTLHRFRMNWGAGGRRIETSDDHSIFVGDLAPDVADELLLSTFSARFTTVRGAKVVMDPITRMSKGFGFVRFGSKEEADQALQTMNGVFCSSRPMRVSVATERNKARQQLGFSMSEEDGANTTVFVGGLDPGTSEEELRTRFGALGEIVSVKVPPGRGCGFVQYTTKEAAEAAISQMNGSVVGGVKVRCAWGRSAAA 270

[Close]

BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: K3W5A8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W5A8_GLOUD)

HSP 1 Score: 266 bits (679), Expect = 4.300e-80
Identity = 135/270 (50.00%), Postives = 180/270 (66.67%), Query Frame = 0

Query:   19 CKTLWLGDVQPDWTEEYVESLFSSIGQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTG-------IQGQTGAHATDP--SNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKS 279
            CKTLW+GD+Q  W E ++ SLF++ G++  VKLIRD+  G  AGYGF++F     A+ VLET NG+ I  T  R+R+NWGAGG+RIE   ++SVFVGDL+P+V+D  L +TF  +F SV GAKVV +P+T  SK FGF+RFG++ E D+AL +MNG  C  RP+RV+ AT R G       + G  G   T+   +NTTVFVGG++ S TE+ LR  F   G+I +V  PPGRGC FV +T + +AE  I  M G  I G  VR +WG+S
Sbjct:    5 CKTLWMGDIQMHWDEAFISSLFAATGEQPVVKLIRDKVTGYPAGYGFLEFPTQRGAQLVLETYNGQVIPNTLHRFRMNWGAGGRRIETGDDHSVFVGDLAPDVSDELLLTTFSTRFSSVRGAKVVIDPVTRMSKGFGFVRFGNKEEADQALQTMNGVYCSSRPMRVSVATDRNGKPRSGNQVYGAGGMGNTEEEGANTTVFVGGLDPSTTEEELRARFGAIGDIVSVKVPPGRGCGFVQYTTKEAAEVAIGQMNGTVIGGVKVRCAWGRS 274

[Close]

BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: A0A3M6VIX5_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIX5_9STRA)

HSP 1 Score: 265 bits (677), Expect = 8.510e-80
Identity = 132/266 (49.62%), Postives = 180/266 (67.67%), Query Frame = 0

Query:   19 CKTLWLGDVQPDWTEEYVESLFSSIGQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTGIQGQTG--AHATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKSGRA 282
            CKTLW+GD+Q  W E ++ SLF++  ++  +KLIRD+  G  AGYGF++F   + A+ VLET NG+ I  T  R+R+NWGAGG+RIE   ++S+FVGDL+P+VTD  L STF A+F SV GAKVV +P+T  SK FGF+RFG + E D+AL +MNG  C  RP+RV+ AT+R   + Q G      + +NTTVFVGG++   TE+ LR  F   GEI ++  PPGRGC FV +T + +AE+ I  M G  + G  VR +WG+S  A
Sbjct:    5 CKTLWMGDIQMHWDETFIASLFATAVEQPVIKLIRDKVTGYPAGYGFLEFPTQQGAQQVLETYNGQLIPNTMHRFRMNWGAGGRRIESLEDHSIFVGDLAPDVTDELLLSTFNARFSSVRGAKVVMDPVTRMSKGFGFVRFGGKNEADQALQTMNGVYCSSRPMRVSVATERNKARQQMGFTMGEEEGANTTVFVGGLDPLTTEEELRARFGVLGEIVSIKVPPGRGCGFVQYTSKEAAENAILQMNGTVVSGVKVRCAWGRSAAA 270

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot

BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JN78_9PHAE	1.750e-202	67.53	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FKJ7_ECTSI	4.150e-189	78.53	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
W7TLC3_9STRA	3.850e-90	50.77	Nuclear acid binding protein n=2 Tax=Monodopsidace...	[more]
H3G796_PHYRM	1.900e-83	51.33	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
A0A8K1CQ96_PYTOL	1.780e-82	50.19	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A2D4BYT1_PYTIN	8.800e-81	49.63	Uncharacterized protein n=2 Tax=Pythium insidiosum...	[more]
A0A484DTT9_BRELC	1.330e-80	50.38	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
A0A0P1A6W8_PLAHL	2.560e-80	50.00	Nuclear acid binding n=1 Tax=Plasmopara halstedii ...	[more]
K3W5A8_GLOUD	4.300e-80	50.00	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A3M6VIX5_9STRA	8.510e-80	49.62	Uncharacterized protein n=1 Tax=Peronospora effusa...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 21..94 e-value: 5.0E-13 score: 59.3 coord: 111..185 e-value: 1.8E-18 score: 77.4 coord: 208..275 e-value: 2.7E-15 score: 66.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 112..183 e-value: 1.1E-13 score: 50.8 coord: 209..272 e-value: 7.5E-12 score: 44.9 coord: 22..91 e-value: 3.6E-12 score: 45.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 207..279 score: 13.737
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 110..189 score: 16.79
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 20..98 score: 14.556
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 19..98 e-value: 4.2E-19 score: 70.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 198..285 e-value: 7.9E-21 score: 76.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 99..197 e-value: 1.3E-21 score: 78.9
None	No IPR available	PANTHER	PTHR47640	FAMILY NOT NAMED	coord: 20..296
None	No IPR available	PANTHER	PTHR47640:SF10	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED	coord: 20..296
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 107..281
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 17..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig6789	contig	H-elongata_contig6789:2192..9421 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig6789.14400.1	mRNA_H-elongata_contig6789.14400.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig6789 1600..9685 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig6789.14400.1 ID=prot_H-elongata_contig6789.14400.1|Name=mRNA_H-elongata_contig6789.14400.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=542bp
MADDERDAYQDADPGATGCKTLWLGDVQPDWTEEYVESLFSSIGQELEVK
LIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAG
GKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGS
SKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTGIQGQTGAH
ATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFT
HRVSAEHVINNMQGITICGSCVRLSWGKSGRADRDRERERAVDVHAGLPG
MGANIIQPSTSPAAAAAVRSAQFSGLYGHPPSYAAYGSNFPANIFSATGM
YSGAATGYAPTQQTAGLQQAAQTPSQLPQQHQPQTQQVQQQQQQHSQQQQ
HSHQQQQHSQQQHSQQQQQHSQQQQQYAQHYSPHSFAPFQGFGFQQFPGQ
AAAAAYAGFAAGNAAAYADPSGLATDLSQLSLSTNNAATIGVGGVVGAGG
RPTRLGASRGGVYAPTTRAGPGPAFSLQDGRKGGAGPASRN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf