mRNA_H-elongata_contig6789.14400.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6789.14400.1
Unique NamemRNA_H-elongata_contig6789.14400.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: A0A6H5JN78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN78_9PHAE)

HSP 1 Score: 585 bits (1508), Expect = 1.130e-198
Identity = 389/576 (67.53%), Postives = 417/576 (72.40%), Query Frame = 1 
Query:  265 MADDERDAYQDADPGATGCKTLWLGDVQPDWTEEYVESLFSSI-GQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTGIQGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKSGRADRDRERERAVDVHAGLPGMGANIIQPSTSPAAAAA------VRSAQFSGLYGHPPSYAAYGSNFPANIFSATGMYSGAATGYAPTQQTAGLQQ--AAQTPSQLPQQHQPQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYSPHSFAPFQGFGFQQFPGQAAAAAYAGFAAGNAAAYADPSGLATDLSQLSLSTNNAATIGVGGVVGAGGRPTRLGASRGG--------------VYAPTTRAGPG------------PAFSLQDGRKGGAGPASRN 1887
            MADD++  YQD +  A   KTLWLGDVQPDWTEEYVESLFS I G+ELEVKLIRDRHRGIVAGYGFIDFRNHETA+ VL++LNGKPIEGTSLRYRLNWGAGGKRIEQ PEYSVFVGDLSPEVTDA+LK+TFL K+ SVLGAKVVTNPMTGSSKSFGFIRFGDE+ERDEALT+MNGAECCGRPIRVAPATKRT +QGQTGAHATDPSNTTVFVGGINDSVTEKVLR+TF  AGEIQTVTTPPGRGCAFVTF HR SAEHVINNMQG T+CGSCVRLSWGKSGRADRDRERERA     G P MG   IQ  +SP A          R A FSGLYGHP SYA++   +PANIF A  +Y GA     P QQ  GL    AA T  QLPQ             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        P+QGFGFQQ+P Q  AA Y  F   NAA   DPS LA DLSQLSLS   A+ +G                                  +Y P +R+G              P+FSLQD RKGG GPASRN
Sbjct:    1 MADDQQ--YQDENRSA--AKTLWLGDVQPDWTEEYVESLFSGIVGKELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDAELKATFLDKYASVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVTEKVLRETFNSAGEIQTVTTPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSCVRLSWGKSGRADRDRERERA----GGDPIMGMGGIQ--SSPTAXXXXXXXXXARGAPFSGLYGHPQSYASFNGAYPANIFPAGAVYGGAYP--QPGQQQPGLPPPAAAGTGQQLPQ------------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYQGFGFQQYPAQQQAA-YTSFNGNNAAYAQDPSALANDLSQLSLSGGAASAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYGPASRSGXXXXXXXXXXXXXXPSFSLQDVRKGGLGPASRN 551
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BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: D7FKJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKJ7_ECTSI)

HSP 1 Score: 546 bits (1408), Expect = 2.190e-185
Identity = 289/368 (78.53%), Postives = 308/368 (83.70%), Query Frame = 1 
Query:  265 MADDERDAYQDADPGATGCKTLWLGDVQPDWTEEYVESLFSSI-GQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTGIQGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKSGRADRDRERERAVDVHAGLPGMGANIIQPSTSPAAAAA------VRSAQFSGLYGHPPSYAAYGSNFP-----ANIFSATGMYSGAAT 1332
            MADD++  YQD +  A   KTLWLGDVQPDWTEEYVESLFSSI GQELEVKLIRDRHRGIVAGYGFIDFRNHETA+ VL++LNGKPIEGTSLRYRLNWGAGGKRIEQ PEYSVFVGDLSPEVTDA+LK+TFL K+ SVLGAKVVTNPMTGSSKSFGFIRFGDE+ERDEALT+MNGAECCGRPIRVAPATKRT +QGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTF  AGEIQTVTTPPGRGCAFVTF HR SAEHVINNMQG T+CGSCVRLSWGKSGRADRDRERERA     G P MG   IQ  +SP A          R A FSGLYGHP SYA++   +P     AN  S   +  GAA+
Sbjct:    1 MADDQQ--YQDENRSA--AKTLWLGDVQPDWTEEYVESLFSSIVGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDAELKATFLGKYTSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFNSAGEIQTVTTPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSCVRLSWGKSGRADRDRERERA----GGDPIMGMGGIQ--SSPTAXXXXXXXXXARGAPFSGLYGHPQSYASFNGAYPDPSALANDLSQLSLSGGAAS 358
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BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: W7TLC3_9STRA (Nuclear acid binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLC3_9STRA)

HSP 1 Score: 298 bits (762), Expect = 3.070e-87
Identity = 164/323 (50.77%), Postives = 201/323 (62.23%), Query Frame = 1 
Query:  319 CKTLWLGDVQPDWTEEYVESLFSSIGQE----LEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPAT--KRTGIQG-------QTGAHAT----------------DPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKSGRADRDRERERAVDVH-------AGLPGMGANI 1179
            CKTLW+GD+QP W E YV S+F++ G E    +EVKLIRD+H G  AGYGF++F   E A+ VLET NG  I GT  R+RLNWGAGGKR+E  PE+S+FVGDL+PEVTD  L+  FL KF S LGAKVV +P++G SK FGF+RF +E E++EAL++M G  C GR IRVAPAT  K  G  G         G HA+                DP NTTVFVGGI+  VTE VLR+ F+  G+I  V  PPGRGC FV + +R SAE  I  MQG  + G  VRLSWG+S  A  +  R   +          AG P M A +
Sbjct:    8 CKTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAKKAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRSSPARAEGRRMGGMGXXXXXXMGMAGYPAMYATV 330
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BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: H3G796_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G796_PHYRM)

HSP 1 Score: 270 bits (689), Expect = 8.360e-81
Identity = 135/263 (51.33%), Postives = 178/263 (67.68%), Query Frame = 1 
Query:  319 CKTLWLGDVQPDWTEEYVESLFSSIGQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTGIQGQT--GAHATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKS 1101
            CKTLW+GD+Q  W E ++ SLF+S  ++  VKLIRD+  G  AGYGF++F     A+ VLET NG+ I  T  R+R+NWGAGG+RIE   ++S+FVGDL+P+V D  L STF ++F SV GAKVV +P+T  SK FGF+RFG + E D+AL +MNG  C  RP+RV+ AT+R   +     GA   + +NTTVFVGG++ S TE  LR  F   GEI +V  PPGRGC FV +T + +AE  I+ M G  ICG  VR +WG+S
Sbjct:    2 CKTLWMGDIQMHWDEAFISSLFASAAEQPVVKLIRDKVTGYPAGYGFLEFPTQLGAQQVLETFNGQLIPNTMHRFRMNWGAGGRRIETSDDHSIFVGDLAPDVGDELLLSTFNSRFSSVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATERNKARQMPSFGAAEEEGANTTVFVGGLDPSTTEDELRARFGALGEIVSVKVPPGRGCGFVQYTSKEAAEVAISQMNGTVICGVKVRCAWGRS 264
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BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: A0A8K1CQ96_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQ96_PYTOL)

HSP 1 Score: 273 bits (697), Expect = 8.410e-80
Identity = 135/269 (50.19%), Postives = 182/269 (67.66%), Query Frame = 1 
Query:  319 CKTLWLGDVQPDWTEEYVESLFSSIGQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRT--------GIQGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKS 1101
            CKTLW+GD+QP W E ++ SLF+S  +   VKLIRD+  G  +GYGF++F+  + A++VLE  NG+ I  T  R+R+NWGAGG+R+E   ++S+FVGDL+P+VTD  L STF A+F SV  AKVVT+P+T  SK FGF+RFG + E D+AL +MNG  C  RP+RV+ AT R         G+ G  G    + +NTTVF+GG++ + TE+ LR  FA  GE+ +V  PPGRGC FV +  R SAE  IN M G  I GS +R +WG+S
Sbjct:    5 CKTLWMGDIQPHWDEAFIGSLFASCSEIPVVKLIRDKVTGYPSGYGFLEFQTQQGAQYVLENFNGQVIPNTMHRFRMNWGAGGRRLETGEDHSIFVGDLAPDVTDELLLSTFAARFASVRNAKVVTDPLTRMSKGFGFVRFGAKEEADQALQTMNGVYCSSRPMRVSVATDRNAGRPRQDFGMPGMVGVVDAEGANTTVFIGGLDANTTEEDLRARFAPFGEMVSVKVPPGRGCGFVHYITRDSAEMAINQMNGALINGSKIRCAWGRS 273
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BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: A0A2D4BYT1_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYT1_PYTIN)

HSP 1 Score: 268 bits (686), Expect = 3.780e-78
Identity = 134/270 (49.63%), Postives = 179/270 (66.30%), Query Frame = 1 
Query:  319 CKTLWLGDVQPDWTEEYVESLFSSIGQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRT-------GI-QGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKSG 1104
            CKTLW+GD+QP W E ++ SLF+S  ++  VKLIRD+  G  +GY F++F +   A+ VLE  NG+ +  T  R+R+NWGAGG+RIE P ++SVFVGDL+P+VTD  L +TF  +F SV  AKVVT+P+T +SK FGF+RFG + E D+AL +MNG  C  RP+RV+ AT R        G  QG TG    D  NTTVF+GG++ S  E  LR  FA  GEI +V  PPGRGC FV +  + SAE  I+ + G  + G  +R +WG+SG
Sbjct:    5 CKTLWMGDIQPQWDEAFIGSLFASCSEQPVVKLIRDKVTGYPSGYCFLEFPSQRGAQXVLENFNGQAVPNTMHRFRMNWGAGGRRIETPEDHSVFVGDLAPDVTDXVLMNTFATRFASVRSAKVVTDPITRTSKGFGFVRFGVKEEADQALQTMNGVYCSSRPMRVSVATDRNRNRNEYGGFPQGPTGVPDADAPNTTVFIGGLDASTAEDELRARFAPFGEITSVRIPPGRGCGFVHYVSKESAEMAISQLNGAVVGGVKIRCAWGRSG 274
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BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: A0A484DTT9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTT9_BRELC)

HSP 1 Score: 267 bits (683), Expect = 5.580e-78
Identity = 134/266 (50.38%), Postives = 179/266 (67.29%), Query Frame = 1 
Query:  319 CKTLWLGDVQPDWTEEYVESLFSSIGQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTGIQGQT--GAHATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKSGRA 1110
            CKTLW+GD+Q  W E Y+ SLF+S  ++  VKLIRD+  G  AGYGF++F   + A+ +L+T NG+ I  T  R+R+NWGAGG+RIE   ++S+FVGDLSP+V+D  L STF A+F +V GAKVV +P+T  SK FGF+RFG + E D+AL +MNG  C  RP+RV+ AT+R   + Q        D +NTTVFVGG++ S TE+ LR  F   GEI +V  PPGRGC FV +T + +AE  I  M G  + G  VR +WG+S  A
Sbjct:    5 CKTLWMGDIQMHWDEAYIVSLFASASEQPVVKLIRDKVTGYPAGYGFLEFPTQQGAQEILDTFNGQLIPNTLHRFRMNWGAGGRRIETSDDHSIFVGDLSPDVSDDLLLSTFSARFSTVRGAKVVMDPITRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATERNKARQQAVFSMGEEDGANTTVFVGGLDPSTTEEELRARFGALGEIVSVKVPPGRGCGFVQYTTKEAAEIAILQMNGSVVSGVKVRCAWGRSAAA 270
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BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: A0A0P1A6W8_PLAHL (Nuclear acid binding n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6W8_PLAHL)

HSP 1 Score: 266 bits (681), Expect = 1.050e-77
Identity = 134/268 (50.00%), Postives = 180/268 (67.16%), Query Frame = 1 
Query:  313 TGCKTLWLGDVQPDWTEEYVESLFSSIGQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTGIQGQTGAHAT--DPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKSGRA 1110
            T CKTLW+GD+Q  W E ++ SLF+S  ++  VKLIRD+  G  AGYGF++F     A+ VLET NG+ I  T  R+R+NWGAGG+RIE   ++S+FVGDL+P+V D  L STF A+F +V GAKVV +P+T  SK FGF+RFG + E D+AL +MNG  C  RP+RV+ AT+R   + Q G   +  D +NTTVFVGG++   +E+ LR  F   GEI +V  PPGRGC FV +T + +AE  I+ M G  + G  VR +WG+S  A
Sbjct:    3 TECKTLWMGDIQMHWDETFIVSLFASAAEQPIVKLIRDKVTGYPAGYGFLEFPTQRGAQQVLETFNGQLIPNTLHRFRMNWGAGGRRIETSDDHSIFVGDLAPDVADELLLSTFSARFTTVRGAKVVMDPITRMSKGFGFVRFGSKEEADQALQTMNGVFCSSRPMRVSVATERNKARQQLGFSMSEEDGANTTVFVGGLDPGTSEEELRTRFGALGEIVSVKVPPGRGCGFVQYTTKEAAEAAISQMNGSVVGGVKVRCAWGRSAAA 270
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BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: K3W5A8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W5A8_GLOUD)

HSP 1 Score: 266 bits (680), Expect = 1.750e-77
Identity = 135/270 (50.00%), Postives = 180/270 (66.67%), Query Frame = 1 
Query:  319 CKTLWLGDVQPDWTEEYVESLFSSIGQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTG-------IQGQTGAHATDP--SNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKS 1101
            CKTLW+GD+Q  W E ++ SLF++ G++  VKLIRD+  G  AGYGF++F     A+ VLET NG+ I  T  R+R+NWGAGG+RIE   ++SVFVGDL+P+V+D  L +TF  +F SV GAKVV +P+T  SK FGF+RFG++ E D+AL +MNG  C  RP+RV+ AT R G       + G  G   T+   +NTTVFVGG++ S TE+ LR  F   G+I +V  PPGRGC FV +T + +AE  I  M G  I G  VR +WG+S
Sbjct:    5 CKTLWMGDIQMHWDEAFISSLFAATGEQPVVKLIRDKVTGYPAGYGFLEFPTQRGAQLVLETYNGQVIPNTLHRFRMNWGAGGRRIETGDDHSVFVGDLAPDVSDELLLTTFSTRFSSVRGAKVVIDPVTRMSKGFGFVRFGNKEEADQALQTMNGVYCSSRPMRVSVATDRNGKPRSGNQVYGAGGMGNTEEEGANTTVFVGGLDPSTTEEELRARFGAIGDIVSVKVPPGRGCGFVQYTTKEAAEVAIGQMNGTVIGGVKVRCAWGRS 274
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BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Match: A0A3M6VIX5_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIX5_9STRA)

HSP 1 Score: 265 bits (678), Expect = 3.410e-77
Identity = 132/266 (49.62%), Postives = 180/266 (67.67%), Query Frame = 1 
Query:  319 CKTLWLGDVQPDWTEEYVESLFSSIGQELEVKLIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAGGKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGSSKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTGIQGQTG--AHATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFTHRVSAEHVINNMQGITICGSCVRLSWGKSGRA 1110
            CKTLW+GD+Q  W E ++ SLF++  ++  +KLIRD+  G  AGYGF++F   + A+ VLET NG+ I  T  R+R+NWGAGG+RIE   ++S+FVGDL+P+VTD  L STF A+F SV GAKVV +P+T  SK FGF+RFG + E D+AL +MNG  C  RP+RV+ AT+R   + Q G      + +NTTVFVGG++   TE+ LR  F   GEI ++  PPGRGC FV +T + +AE+ I  M G  + G  VR +WG+S  A
Sbjct:    5 CKTLWMGDIQMHWDETFIASLFATAVEQPVIKLIRDKVTGYPAGYGFLEFPTQQGAQQVLETYNGQLIPNTMHRFRMNWGAGGRRIESLEDHSIFVGDLAPDVTDELLLSTFNARFSSVRGAKVVMDPVTRMSKGFGFVRFGGKNEADQALQTMNGVYCSSRPMRVSVATERNKARQQMGFTMGEEEGANTTVFVGGLDPLTTEEELRARFGVLGEIVSIKVPPGRGCGFVQYTSKEAAENAILQMNGTVVSGVKVRCAWGRSAAA 270
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6789.14400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JN78_9PHAE1.130e-19867.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKJ7_ECTSI2.190e-18578.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TLC3_9STRA3.070e-8750.77Nuclear acid binding protein n=2 Tax=Monodopsidace... [more]
H3G796_PHYRM8.360e-8151.33Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A8K1CQ96_PYTOL8.410e-8050.19Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BYT1_PYTIN3.780e-7849.63Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A484DTT9_BRELC5.580e-7850.38Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A0P1A6W8_PLAHL1.050e-7750.00Nuclear acid binding n=1 Tax=Plasmopara halstedii ... [more]
K3W5A8_GLOUD1.750e-7750.00Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3M6VIX5_9STRA3.410e-7749.62Uncharacterized protein n=1 Tax=Peronospora effusa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6789contigH-elongata_contig6789:1600..9685 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score546.2
Seed ortholog evalue1.7e-152
Seed eggNOG ortholog2880.D7FKJ7
Preferred nameTRNAU1AP
KEGG koko:K11274
GOsGO:0000049,GO:0000243,GO:0000245,GO:0000302,GO:0000375,GO:0000377,GO:0000398,GO:0000932,GO:0001101,GO:0001514,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0005685,GO:0005737,GO:0005829,GO:0006139,GO:0006376,GO:0006396,GO:0006397,GO:0006412,GO:0006414,GO:0006417,GO:0006451,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0008143,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009719,GO:0009725,GO:0009735,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009987,GO:0010033,GO:0010035,GO:0010193,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010610,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0031331,GO:0032268,GO:0032269,GO:0032991,GO:0033120,GO:0033554,GO:0034248,GO:0034249,GO:0034599,GO:0034605,GO:0034622,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0042221,GO:0042493,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043484,GO:0043487,GO:0043488,GO:0043489,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045934,GO:0045935,GO:0046483,GO:0046677,GO:0048024,GO:0048026,GO:0048255,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050684,GO:0050685,GO:0050779,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0061013,GO:0061014,GO:0061157,GO:0061158,GO:0065003,GO:0065007,GO:0065008,GO:0070717,GO:0070887,GO:0070935,GO:0071004,GO:0071010,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1902369,GO:1902373,GO:1903311,GO:1903312,GO:1903313,GO:1990904,GO:2000112,GO:2000113,GO:2000815
EggNOG free text desc.RNA binding
EggNOG OGsKOG0118@1,KOG0118@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Exons6
Model size2482
Cds size1626
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6789.14400.1prot_H-elongata_contig6789.14400.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6789 2192..9421 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931070.5602007-UTR-H-elongata_contig6789:1599..21911622931070.5602007-UTR-H-elongata_contig6789:1599..2191Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6789 1600..2191 -
1691679685.642658-UTR-H-elongata_contig6789:1599..21911691679685.642658-UTR-H-elongata_contig6789:1599..2191Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6789 1600..2191 -
1622931070.6902034-UTR-H-elongata_contig6789:9421..96851622931070.6902034-UTR-H-elongata_contig6789:9421..9685Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6789 9422..9685 -
1691679685.722877-UTR-H-elongata_contig6789:9421..96851691679685.722877-UTR-H-elongata_contig6789:9421..9685Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6789 9422..9685 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931070.5743334-CDS-H-elongata_contig6789:2191..24131622931070.5743334-CDS-H-elongata_contig6789:2191..2413Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6789 2192..2413 -
1691679685.6554673-CDS-H-elongata_contig6789:2191..24131691679685.6554673-CDS-H-elongata_contig6789:2191..2413Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6789 2192..2413 -
1622931070.586719-CDS-H-elongata_contig6789:4226..50471622931070.586719-CDS-H-elongata_contig6789:4226..5047Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6789 4227..5047 -
1691679685.6682303-CDS-H-elongata_contig6789:4226..50471691679685.6682303-CDS-H-elongata_contig6789:4226..5047Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6789 4227..5047 -
1622931070.6013436-CDS-H-elongata_contig6789:7350..76741622931070.6013436-CDS-H-elongata_contig6789:7350..7674Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6789 7351..7674 -
1691679685.67806-CDS-H-elongata_contig6789:7350..76741691679685.67806-CDS-H-elongata_contig6789:7350..7674Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6789 7351..7674 -
1622931070.6214874-CDS-H-elongata_contig6789:8570..86991622931070.6214874-CDS-H-elongata_contig6789:8570..8699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6789 8571..8699 -
1691679685.687444-CDS-H-elongata_contig6789:8570..86991691679685.687444-CDS-H-elongata_contig6789:8570..8699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6789 8571..8699 -
1622931070.6405408-CDS-H-elongata_contig6789:8919..89651622931070.6405408-CDS-H-elongata_contig6789:8919..8965Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6789 8920..8965 -
1691679685.6983373-CDS-H-elongata_contig6789:8919..89651691679685.6983373-CDS-H-elongata_contig6789:8919..8965Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6789 8920..8965 -
1622931070.6728997-CDS-H-elongata_contig6789:9337..94211622931070.6728997-CDS-H-elongata_contig6789:9337..9421Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6789 9338..9421 -
1691679685.712995-CDS-H-elongata_contig6789:9337..94211691679685.712995-CDS-H-elongata_contig6789:9337..9421Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6789 9338..9421 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6789.14400.1

>prot_H-elongata_contig6789.14400.1 ID=prot_H-elongata_contig6789.14400.1|Name=mRNA_H-elongata_contig6789.14400.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=542bp
MADDERDAYQDADPGATGCKTLWLGDVQPDWTEEYVESLFSSIGQELEVK
LIRDRHRGIVAGYGFIDFRNHETAKFVLETLNGKPIEGTSLRYRLNWGAG
GKRIEQPPEYSVFVGDLSPEVTDADLKSTFLAKFQSVLGAKVVTNPMTGS
SKSFGFIRFGDERERDEALTSMNGAECCGRPIRVAPATKRTGIQGQTGAH
ATDPSNTTVFVGGINDSVTEKVLRDTFACAGEIQTVTTPPGRGCAFVTFT
HRVSAEHVINNMQGITICGSCVRLSWGKSGRADRDRERERAVDVHAGLPG
MGANIIQPSTSPAAAAAVRSAQFSGLYGHPPSYAAYGSNFPANIFSATGM
YSGAATGYAPTQQTAGLQQAAQTPSQLPQQHQPQTQQVQQQQQQHSQQQQ
HSHQQQQHSQQQHSQQQQQHSQQQQQYAQHYSPHSFAPFQGFGFQQFPGQ
AAAAAYAGFAAGNAAAYADPSGLATDLSQLSLSTNNAATIGVGGVVGAGG
RPTRLGASRGGVYAPTTRAGPGPAFSLQDGRKGGAGPASRN*
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mRNA from alignment at H-elongata_contig6789:1600..9685-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6789.14400.1 ID=mRNA_H-elongata_contig6789.14400.1|Name=mRNA_H-elongata_contig6789.14400.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8086bp|location=Sequence derived from alignment at H-elongata_contig6789:1600..9685- (Himanthalia elongata Himel1 dioecious)
AACATCTCCAGTCCATTGTACCTGAGTCTCGACGAGTTCACTACTACTCT
GTAGATCGACCGGCTTGACAAATTTCACACTTCTTGTCGGGTCGTTGCAT
TATTCGTGAATCAAAACGATACGCCACGAGCGTTTTCTCTTCTGGGAAGC
CCCTCAGAGTCAGTGTTCCTGCTACTACATAGAGTACTACTACTGTTGTG
TCAGATCCCGTCCTTGCGGTGGGCACCATCTGGACGGGACTGCCGATTAC
TCATCCGGCGAGGCATGGCAGACGACGAGCGCGATGCTTATCAAGATGCA
GACCCCGGAGCCACAGGCTGCAAAACGCTATGGCTTGGAGATGTTCAAGT
GAGCCGAAAGCATAATAATATCTCGTGGCTCAGGTTTACCCCACACCATG
CGGCCCGAGTTCACCCATCATCAGTATGGTACATTTGTCGTGTCAAGCGT
GTGGTGCTGTCTTTTGGCCTCTGCCTTCATCTATGGGGGAATAAATTTTT
GTTTTTGAATGTCGGTGTCTTAATGGTTACAGAGTAGCTGCGCCGTGTTG
GCTCTTACACACCTCTAGTATAGTATTGGGAGCACCATTGCCTGTTGGTG
GTCAAGCCACGCATCGCGTAAAAATCTCTTATACTGTACTTGACTGGCGA
TTTACTACGACTCTAATGCCGTTTACGCTGCATACCGATGCTTGGCTTCC
CCGTATCTTGGCAACTGAAGCCGGACTGGACAGAGGAATACGTGGAAAGC
CTTTTCTCCTCAATAGGTGAGGTGAAATTCGGATTGAACGAAGCATCCCG
TATTCTGTTTGTCAACGATTTTTGTCACTTCGGACGCACATCCGGTTGGG
CGATGTTCTACTCGGTAAGCCCGCGCCTATCGGGCAGCATTCATGCAGGA
GGTGAAGACCCTGTCTGGTAATCTATTTTCGATGGGGTGGCCGACACGTT
CAACTCCCCACCTCGACTCTTCGTGCCATGTATCAGGGCAAGAACTGGAG
GTGAAGCTCATTCGCGATAGGCACCGGGGCATCGTGGCAGGCTACGGATT
CATCGACTTTCGGAACCACGAGACGGCCAAGTTCGTTCTCGAGACTCTGA
ACGGAAAGCCCATCGGTAAGACAACGCTGAAACAGCCAACCTACGCAGTT
TCAGAATCTCTCGGGTGTCTCGTACGACGAGGAAACCATAGATGCACTAC
ATAGATGTATGTTGTACGAGCAGAGCTCTAGGCTCTAAATATATATCTGG
GCAGCTATTTTATAACGCATATACCAGGTATATATATATATATATATACA
TATACTACTATATATACTACTATATATACTACTATATATACTACCATATA
TAGTAGTATATATATAATATAATATATATATATATATATAGAACCAAGAA
ATGTTCAGCCCTTCGTTATCATTTTCCTTTAAAATATATGAACTCATTCA
AACATCTGTATTTTCAAGAGAAACAACATACCTATACAGCAAGTGCCTGT
AAGTCTCCCTGCTTTCGAGCATGTTTCGAGTTTCTCATGTTCGCGACCTC
GAGTCCCCGAAACTTTGCCGATGAGCTACTGCATTACTGTAAAATAAGAC
ACTACTAAAGTATACAACATGTTGTTGTCCCAACATACTAGATAGAGCTA
TGTACACTGTTCCCATACTAAAAGTGAAATGCTGTAGTTCAGTCAACAAA
TCGGAATGTTACAACCACGCCCGCCCCTTGATTTTGTGGGGGGAACTCTT
TGCTTTTTACAAGGATGCAAAATGCAAAAAAATATGACGCCGCATCCGAC
GACGACGACGACGCGTAACAACACAGCGTTGGTTATTTCGTTTCGTTGCT
TCTAGAAGATTTCAAAACCACCACCATCACAAACCTCTCTCCCGTCCAGT
CGGATTTTCACCGACAAGCAAGCAGACAGGCGCACTTTTCTTCGAGGAGG
AAAAAAAAGTGCGTTTTTCTTCCTTCTACTTTTGTTTGTTGCATCCCTTT
CGTTCTTCCAGAGGGTACTTCTCTGCGTTACCGTCTCAACTGGGGCGCTG
GTGGAAAGCGCATAGAGCAGCCCCCCGAGTATTCCGTCTTCGTCGGGGAT
CTATCCCCAGAGGTGACCGATGCGGACCTCAAGTCAACCTTCCTCGCCAA
ATTTCAGTCTGTCCTGGGAGCGAAAGTCGTCACGAATCCCATGACCGGCT
CTTCCAAGAGTTTCGGCTTTATTAGGTTCGGCGATGAGCGGGAAAGGGAC
GAGGCGCTTACTTCGATGAATGGGGCAGAGTGCTGCGGACGCCCCATACG
CGTCGCTCCTGCGACCAAGCGTACAGGAATTCAGGGTGAGTTGCGTGGGA
AATAAAAATGTGCGCCACGGCGCGATGACGACAGTAGCGGGACGGTGCGT
CCCGCGCTTGACCATGCTAACTCGTGTTTGAACGTGGCCGCATAATAGAG
GGGGGTGAAGCACGCGCAGGAGCTCCGAATAGTTTTTTTTTGTTTGGCTC
TTGACCGTGTCCTGCTGACTCCTTATGTAAAGAAGTACTGTACAGGGGTG
CTCTGAAGCAATCACGTATGGTTAATGCGAAGAACACAAACTGCAAGACA
GATACTACGAGGGTAGGGCAGGCAGAGTAAGCCCGAGAAACGTTTATAGG
TAACAGGACACGCTGGAGGCATGTCAACCACACAAGAGCTGAGACAGACA
GACATAAACAAGAACTGAGACAGACAGACAGACACAAACAAGATCATTTT
GGGGCCACAAAGACTTGCGATCAATAAATAGCCCAAGGCCGCTTTGCTCC
TGTCTCAGAACTATAATAACGACAATGCATGTATGTGCAGCACGGCATAC
TTCTAGGCATGAGTATGTGCGTCTCCAGCGCCGTGACCCCCCCCACCCCC
CACTCCCTTGCCGCCACACCCCCGTCCTCCCTTCGCCGTTGTAACAGTTT
GCGGTCCACGCAGCTTGTCTCTCTTTCTCTTATCTCTGTAAATTCTGTCG
TTTTTCCCGTTGCCGCCCAAAACGCTCCGGAAAAGGTATTCATTGGCAAC
TACATACTACACACTATCACTGCCGCAGTAGAGTAGAGTACGTGTCCCCT
TCTCCGTCGCCTCGTTGTGGTCTGCAGCATCCCCATCTAGATCTAGATAG
ATACTGATAAATACTGTATCCCTTGAGTATTATTATATTATTATATCATC
TTCTCAATCAATCCCCCGTTGCTGCTTGTTGGTATCGTTCGGCAGCAATT
ATATAGTAAATAGTATATAATAAATTAAAAAAGAGATTATAGGTACGAAG
TATTATTTAATACTACATTCGATACAGTACTTTGCGGTCGGTTCCGAAGC
ATAGTCATTATCAATAGTCATTATCAATAGTAGTCATTATCAATAGTATT
CATTATCAATAGTAGTCATTATCAATAGTCATTATCAATCAGTAGTCATT
CGTTGACTTGACTTACCTACTATTAATGGCTCTCAAGGAGAGGGAGGATG
TCAACCCTTTGGACACTATTATTACTGTACTAGATGGAGATGAGTGTGTA
TGGCTGGCTGTGGTAGCCTGTGTCTGTGTGTGTAATATTCCTAACGACGA
CCCGTTTCTTTCAAAAATGGAAGCGCCACCACGTATATGCGTATGTGTGT
GTGCGTGGCTGTGTGTGTGTGTGTGTGTGTGTGTATTCCGGCCCTGTCGT
CCTAGTCCTTCGATACCACTCGTATTGATCCTCCTAGGGGGCGATCAATG
ATGATGTGTATTTATCAAATTACACATAACCGCTCAATCCAACCCTCTGC
CGTGCTAGCCATTCTAGGCTACACGCAAGTGTGTTTGTGTTATCGTGTGT
GTTATCGAAATGACAGGTAGGTGTTGTATTAATAAACTTTCGAAAGAAGC
CAAAGACAAAGCGGAGATTCGGCGTTAACAGTACATCCATATTGTATACA
GTACACTAGTATAATTATATTGTTTTTAGGCACGTTGACTTGAATGCCAG
CGTCGAAAGGGTTCGTCCGTTCCAAGCGTTTGTCTCTTGGGTCGAGCACT
TTGAGACAAAGTTCAAACCTATCCCAATTTCTAGACGACACGTCATTTGA
ACGATGAAACCATCCGTACAGCTCGTGGTGTACACCACTCATATCATCAG
ATGCGACGATCGTTGGGAACGAATATTTTTCGATTTTCTAACATGTTTAC
TCAAGTTTTCCCCCACGTTGTTGTTAGTCGACAGTTAGCATATAAACGAA
CTCTGCAGGTAACACGCGCGGTGTTGTCTCTTGGTATTGCCTGCTGATGG
ACGGAACGGAAATGTGAATGTACATATTTGGCAAGCACCATGAAGGAAAG
CGTTCGCTCAGTCGCATCGTTCCCAGGGTGCTCTAGGGCTATTTATTCCA
CAGGGAAGTAGGCTCCTCGAAGGTTTTAAGTCATACTTCATTCTGTGATC
TACAGATGACCACCGTCACGGACGCGTTGTTAGAACTAGATCGCTCTTGG
TGGGTCGAATATACCGCCACCGCTATCGATATCGATATCGATATCATGTA
TACCTTCGTATTACGGCTAGCCATGGTCACGGTCACGGTCACGATAACGA
TAACGATAACCACAGTCACATTGTTTTCCGTGCGGTAGGGCAAACCGGGG
CGCATGCCACCGACCCAAGCAACACGACGGTATTCGTGGGGGGCATCAAC
GACTCCGTCACCGAAAAAGTGCTGCGGGACACCTTTGCCTGTGCCGGCGA
GATCCAAACAGTAACCACCCCGCCGGGGAGGGGCTGCGCCTTTGTTACCT
TCACGCACCGCGTCAGTGCCGAGCACGTTATCAATAACATGCAGGGCATC
ACTATTTGCGGTAGCTGTGTGCGCCTGTCGTGGGGAAAGTCCGGCCGTGC
TGACCGTGACAGGGAAAGGGAGCGGGCGGTTGATGTGCACGCTGGTCTAC
CCGGCATGGGCGCAAACATAATCCAGCCGTCAACCTCGCCCGCCGCTGCA
GCTGCCGTCCGCAGCGCGCAATTCTCCGGCCTGTACGGTCACCCGCCGTC
TTATGCCGCCTACGGTAGTAACTTTCCAGCCAATATTTTCTCCGCAACGG
GCATGTATAGCGGGGCTGCCACAGGGTATGCGCCCACACAGCAAACGGCG
GGGCTGCAGCAGGCTGCGCAGACCCCGTCGCAGCTTCCCCAACAACACCA
GCCGCAAACCCAGCAAGTCCAGCAGCAGCAGCAGCAGCATTCTCAGCAGC
AGCAGCACTCTCATCAGCAACAGCAGCATTCTCAGCAGCAGCACTCTCAA
CAGCAGCAGCAGCACTCTCAGCAGCAGCAGCAGTACGCGCAGCACTACTC
GCCCCACTCGTTCGCCCCTTTCCAGGGGTTCGGGTTTCAGCAGTTTCCGG
GGCAGGCAGCGGCTGCGGCGTACGCGGGTTTTGCGGCGGGGAATGCGGCG
GCGTACGCGGTGAGATGTTAAAGACCAACTGAGTTAGTTAGTTAGTTAGC
GACGGAACCTAGTTTTATCTGCGTGTGTGTGTGTGCGTGTGTGCGTGTGT
ATTTATTAACTAGATATTATAGCATAGTATTATAGTATAGTATTATAGTG
TAGTAAGCACGAGAATACTAAATAAATCGAGGAAAATCCTACTAGTCTGA
AATATAAATAAATCGAAGTTTAGTAGGTAGAGGCTCTACTTGTAACCGAT
TTATTTATCTGCTGCTGGGTCTTGGCTTTATTAAATCAAGACGACCCGGA
CGGGTAAGCACCGATTCTAAAGCCGACCTCTGAAACACCGTTTTGTTAAT
GATTTTGTAGGGATCCTGTGGACAAGTTGTTCTTACTCTTACTCTCTTGG
CAACTTGTCGAGTCGGTCGCTGCTGTGCTGTACTGTACGATACTATACTA
TACTCTACTTTACTCTACTCTATTATGGTATACTAATAACTACATACCGT
ACTACTTATTCCAGCCCTCAGTCCTCAGTCCTCAATCCCGATCGCTTTGA
TCCATTACTGCTGCTGCTACTGCTGCTGCTGCGGCCAACTGCTTCGTGTA
ATTACCATCCTCCTCTTTAGCTTGAATCGATAGTTTTAAATGCCTCATCT
CTCTATACTTTATACTATAATCGGTATGGTTTTCTTTTCCTCTTGACGAG
ACGAGACGAGCGGGAATTATCCCTTTAAATTTAACAGCAGCAGGACAGGG
TCTGGCAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAAGTTCGGTTATTA
TTTTTATTTGTTATTGCTGGAGATTCCGAAATCGGTTGTTATAGCCTGGC
GGCGGCGGCATTGTTGTCGACCTTATAATATTAATATTAATAATACTATT
ACTAATACTAATGCTCACAGTGACCGAGTTGTTGTATCTTTAAGAAGAGT
TAAATATAATCGTCTCTTTTTTTCTTCTTGTAAGATGTGTCCTCCTGCTG
CACGGTGTAATACTGTACGATCTACTCAAGACTACTATCTTTATCTTGTA
TGTAGATACATGTATATATATACACTGTACGAAGGAGAAGCAGGGGAGCG
GGGATGGTTCGGAACCGTTGAAACCCTTCTAATAGTACTAATAGTACTAG
TAGTGGGTAGTAGTGGGTAGACGCCCTTCTACTGCTACTGCTACTGCTAT
CGCCACTGCCGGAGCGTCGGAGCGGATCGGCTTTTGATGGGGTATAGAGC
TTAATCCACCCGATAAACCACGATCAGCCGGAATGCGTCGCCATCATCGT
AGTTTTTGCTTTTTTTTTGGTCTGCAGCTAACAAATTATTATCCAGACTG
CACTAAATATAGAATACAGTATCTATTTTATTCTATATTTCCCCGTTTTG
CCGGATGGATGGATGTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTT
TTTTTTTCTTTTCCTCTTTCTATCTTACCAAGACCAAGACAAAACCCTTT
TTTTTTTTTNNNNNNNNNNAAACACCCTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTGTTGGGTGGATTTTTTTTTTTTTTTTTTTTTTTTTTTT
CCCGTCCACATGACTGACGATCCGACTGACGATCTGACAAGGACAAGGAC
AAACCCCTCTATTCTATTTAAATCACGACCCAAGAGTCGCTCCGCTGGAC
ACACCCATTACCATTCAAAAATCCATTAAATCCATATTATTCCCGCTTTC
TCCGCGTTCTTTTCGTTTTCTATTCCTATTTATTTTTATTTTCCTTTTGA
AAAAAACCCAACATCGAGTCAGGACCCGAGCGGCCTCGCCACGGATCTTT
CCCAGCTCTCATTGTCCACAAATAACGCGGCTACAATCGGCGTTGGAGGC
GTCGTCGGGGCCGGTGGCCGTCCAACGCGGCTCGGGGCGTCTCGAGGTGG
TGTTTACGCGCCTACGACTCGGGCCGGACCGGGCCCCGCGTTTTCCCTTC
AGGACGGTCGAAAGGGGGGCGCGGGTCCCGCCAGCCGCAACTAAAGCGCG
ATCGGTAGCCCAAGCGCATGGAGGAGGATTACGGGGCTAGAGGAGGAAGG
GGAGAAGAGATATGGCAGAGGTGAGGTGAGGTGAGGGGGGAGAGATATGG
TAGAGGTGGAAGCGGAAAAGGCAATGATGCTGCTGGAAGCATCGTGAAGG
AACGAGCGGGAGATGTGCGTGGTGTGTGCTGTATGCCTATTATGGATTGA
TTGATTGATGATTGATTGATGATTGATTGATGATTGATTGATGATTGATT
GATGGTTGGTTGGGTGTAGAAAGAGAAAAGAGAGAGTTTGTCTGCGTTTT
AGTGTGCGTTTTATGAACAAAGTGTCCGCTGCTGCCTCATTGTTCATGTT
TTATGATTTGATGATTTTTGATGGTGCTGTGTGCGAAGGGGGCATACATT
TCCTCCCTCGTTGACCCTGCGTTGAGTTGAGTTGATGACCTTGAAATCAT
CCTTTCGTCGTGTCAAGCCAACGCTTTTTTTGCGAGCATCGATGCGCGCG
GCAGAGTCGGTTTGAGGAAGATCCCCGAACGCACGTACCTTGACGACACG
GCGTGCGTTAGTTGACGACATGCTTCGGAGAGGGGG
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Coding sequence (CDS) from alignment at H-elongata_contig6789:1600..9685-

>mRNA_H-elongata_contig6789.14400.1 ID=mRNA_H-elongata_contig6789.14400.1|Name=mRNA_H-elongata_contig6789.14400.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3252bp|location=Sequence derived from alignment at H-elongata_contig6789:1600..9685- (Himanthalia elongata Himel1 dioecious)
ATGGCAGACGACGAGCGCGATGCTTATCAAGATGCAGACCCCGGAGCCAC
AGGCTGCAAAACGCTATGGCTTGGAGATGTTCAAATGGCAGACGACGAGC
GCGATGCTTATCAAGATGCAGACCCCGGAGCCACAGGCTGCAAAACGCTA
TGGCTTGGAGATGTTCAACCGGACTGGACAGAGGAATACGTGGAAAGCCT
TTTCTCCTCAATAGCCGGACTGGACAGAGGAATACGTGGAAAGCCTTTTC
TCCTCAATAGGGCAAGAACTGGAGGTGAAGCTCATTCGCGATAGGCACCG
GGGCATCGTGGCAGGCTACGGATTCATCGACTTTCGGAACCACGAGACGG
CCAAGTTCGTTCTCGAGACTCTGAACGGAAAGCCCATCGGGCAAGAACTG
GAGGTGAAGCTCATTCGCGATAGGCACCGGGGCATCGTGGCAGGCTACGG
ATTCATCGACTTTCGGAACCACGAGACGGCCAAGTTCGTTCTCGAGACTC
TGAACGGAAAGCCCATCGAGGGTACTTCTCTGCGTTACCGTCTCAACTGG
GGCGCTGGTGGAAAGCGCATAGAGCAGCCCCCCGAGTATTCCGTCTTCGT
CGGGGATCTATCCCCAGAGGTGACCGATGCGGACCTCAAGTCAACCTTCC
TCGCCAAATTTCAGTCTGTCCTGGGAGCGAAAGTCGTCACGAATCCCATG
ACCGGCTCTTCCAAGAGTTTCGGCTTTATTAGGTTCGGCGATGAGCGGGA
AAGGGACGAGGCGCTTACTTCGATGAATGGGGCAGAGTGCTGCGGACGCC
CCATACGCGTCGCTCCTGCGACCAAGCGTACAGGAATTCAGGAGGGTACT
TCTCTGCGTTACCGTCTCAACTGGGGCGCTGGTGGAAAGCGCATAGAGCA
GCCCCCCGAGTATTCCGTCTTCGTCGGGGATCTATCCCCAGAGGTGACCG
ATGCGGACCTCAAGTCAACCTTCCTCGCCAAATTTCAGTCTGTCCTGGGA
GCGAAAGTCGTCACGAATCCCATGACCGGCTCTTCCAAGAGTTTCGGCTT
TATTAGGTTCGGCGATGAGCGGGAAAGGGACGAGGCGCTTACTTCGATGA
ATGGGGCAGAGTGCTGCGGACGCCCCATACGCGTCGCTCCTGCGACCAAG
CGTACAGGAATTCAGGGGCAAACCGGGGCGCATGCCACCGACCCAAGCAA
CACGACGGTATTCGTGGGGGGCATCAACGACTCCGTCACCGAAAAAGTGC
TGCGGGACACCTTTGCCTGTGCCGGCGAGATCCAAACAGTAACCACCCCG
CCGGGGAGGGGCTGCGCCTTTGTTACCTTCACGCACCGCGTCAGTGCCGA
GCACGTTATCAATAACATGCAGGGCATCACTATTTGCGGTAGCTGTGTGC
GCCTGTCGTGGGGAAAGTCCGGCCGTGCTGACCGTGACAGGGAAAGGGAG
CGGGCGGTTGATGTGCACGCTGGTCTACCCGGCATGGGCGCAAACATAAT
CCAGCCGTCAACCTCGCCCGCCGCTGCAGCTGCCGTCCGCAGCGCGCAAT
TCTCCGGCCTGTACGGTCACCCGCCGTCTTATGCCGCCTACGGTAGTAAC
TTTCCAGCCAATATTTTCTCCGCAACGGGCATGTATAGCGGGGCTGCCAC
AGGGTATGCGCCCACACAGCAAACGGCGGGGCTGCAGCAGGCTGCGCAGA
CCCCGTCGCAGCTTCCCCAACAACACCAGCCGCAAACCCAGCAAGTCCAG
CAGCAGCAGCAGCAGCATTCTCAGCAGCAGCAGCACTCTCATCAGCAACA
GCAGCATTCTCAGCAGCAGCACTCTCAACAGCAGCAGCAGCACTCTCAGC
AGCAGCAGCAGTACGCGCAGCACTACTCGCCCCACTCGTTCGCCCCTTTC
CAGGGGTTCGGGTTTCAGCAGTTTCCGGGGCAGGCAGCGGCTGCGGCGTA
CGCGGGTTTTGCGGCGGGGAATGCGGCGGCGTACGCGGGCAAACCGGGGC
GCATGCCACCGACCCAAGCAACACGACGGTATTCGTGGGGGGCATCAACG
ACTCCGTCACCGAAAAAGTGCTGCGGGACACCTTTGCCTGTGCCGGCGAG
ATCCAAACAGTAACCACCCCGCCGGGGAGGGGCTGCGCCTTTGTTACCTT
CACGCACCGCGTCAGTGCCGAGCACGTTATCAATAACATGCAGGGCATCA
CTATTTGCGGTAGCTGTGTGCGCCTGTCGTGGGGAAAGTCCGGCCGTGCT
GACCGTGACAGGGAAAGGGAGCGGGCGGTTGATGTGCACGCTGGTCTACC
CGGCATGGGCGCAAACATAATCCAGCCGTCAACCTCGCCCGCCGCTGCAG
CTGCCGTCCGCAGCGCGCAATTCTCCGGCCTGTACGGTCACCCGCCGTCT
TATGCCGCCTACGGTAGTAACTTTCCAGCCAATATTTTCTCCGCAACGGG
CATGTATAGCGGGGCTGCCACAGGGTATGCGCCCACACAGCAAACGGCGG
GGCTGCAGCAGGCTGCGCAGACCCCGTCGCAGCTTCCCCAACAACACCAG
CCGCAAACCCAGCAAGTCCAGCAGCAGCAGCAGCAGCATTCTCAGCAGCA
GCAGCACTCTCATCAGCAACAGCAGCATTCTCAGCAGCAGCACTCTCAAC
AGCAGCAGCAGCACTCTCAGCAGCAGCAGCAGTACGCGCAGCACTACTCG
CCCCACTCGTTCGCCCCTTTCCAGGGGTTCGGGTTTCAGCAGTTTCCGGG
GCAGGCAGCGGCTGCGGCGTACGCGGGTTTTGCGGCGGGGAATGCGGCGG
CGTACGCGGACCCGAGCGGCCTCGCCACGGATCTTTCCCAGCTCTCATTG
TCCACAAATAACGCGGCTACAATCGGCGTTGGAGGCGTCGTCGGGGCCGG
TGGCCGTCCAACGCGGCTCGGGGCGTCTCGAGGTGGTGTTTACGCGCCTA
CGACTCGGGCCGGACCGGGCCCCGCGTTTTCCCTTCAGGACGGTCGAAAG
GGGGGCGCGGGTCCCGCCAGCCGCAACTAAGACCCGAGCGGCCTCGCCAC
GGATCTTTCCCAGCTCTCATTGTCCACAAATAACGCGGCTACAATCGGCG
TTGGAGGCGTCGTCGGGGCCGGTGGCCGTCCAACGCGGCTCGGGGCGTCT
CGAGGTGGTGTTTACGCGCCTACGACTCGGGCCGGACCGGGCCCCGCGTT
TTCCCTTCAGGACGGTCGAAAGGGGGGCGCGGGTCCCGCCAGCCGCAACT
AA
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