mRNA_H-elongata_contig67814.14395.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig67814.14395.1
Unique NamemRNA_H-elongata_contig67814.14395.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: D8LGI7_ECTSI (TIP120 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI7_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 1.400e-91
Identity = 148/187 (79.14%), Postives = 163/187 (87.17%), Query Frame = 1
Query:    1 YLPGILNAFVSSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVCDVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKA 561
            YLPGIL+AF  SVKHQYLLLSSLKEVIVCHA T GL+F PYVDQVLPH+F HCTS+EEGVRNMVAECLG LT MHP RL+PEL+KLPG D  +   +WTLATSLKYCMAG APVE LSP+ME FL M++++DLDVKKAALLMVNAAVHHQPFLVSELLP  +IPALY T+ LKLERIVDLGPFKHK 
Sbjct:  835 YLPGILDAFERSVKHQYLLLSSLKEVIVCHANTPGLEFGPYVDQVLPHLFQHCTSDEEGVRNMVAECLGVLTSMHPQRLVPELLKLPG-DKPNPLTLWTLATSLKYCMAGNAPVEELSPHMESFLEMMNNDDLDVKKAALLMVNAAVHHQPFLVSELLPGQIIPALYTTVELKLERIVDLGPFKHKV 1020          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S2CRP2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CRP2_9STRA)

HSP 1 Score: 213 bits (541), Expect = 4.220e-64
Identity = 109/191 (57.07%), Postives = 133/191 (69.63%), Query Frame = 1
Query:    1 YLPGILNAFVSSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDV----CDVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKA 561
            YLP IL +  ++ +H YLLLS+LKEVI+ HA T GLDF PY++QVLPH+  HC S EEGVRNMVAECLGAL  MHP  ++P L  L G +         + WT+A+SLKYCM G+AP   L  +M  FL ML+DEDL V+ AAL M NAAVHHQP L+   L   +IP LY+T+ LK ER+VDLGPFK K 
Sbjct:  100 YLPVILESLNAN-RHHYLLLSALKEVILLHANTTGLDFGPYIEQVLPHLLKHCESAEEGVRNMVAECLGALITMHPEVIVPALTNLGGGNEGGAPAGSLMRWTIASSLKYCMTGRAPHAILMEHMANFLEMLNDEDLQVRHAALSMCNAAVHHQPNLIISFLDSKIIPVLYETVRLKQERVVDLGPFKQKV 289          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A836CDP2_9STRA (Armadillo-type protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDP2_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.660e-63
Identity = 114/216 (52.78%), Postives = 146/216 (67.59%), Query Frame = 1
Query:    1 YLPGILNAFVSSVKHQYLLLSSLKEVIVCHA-ITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKL----PGYDVCDVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIG------------------------LKLERIVDLGPFKHKA 561
            YLP +L+A + S +HQYLLLSSLKEVIVCHA     LDFS  +DQVLPH+F HC S EEGVRNMVA CLGAL  MHP R++P L++      G ++ D    WT+AT+LK+CMAG AP+ ALSP+M  FL +L+D DLDV++ ALL+ NAA+HHQP LV +LL +++ P L +T+G                        LK+ER+VDLGPFKH+ 
Sbjct:  261 YLPVVLDA-LESTRHQYLLLSSLKEVIVCHARARPPLDFSAALDQVLPHLFGHCQSPEEGVRNMVAACLGALATMHPDRVVPALLEALANAGGEELSDALARWTVATALKHCMAGDAPIAALSPHMRTFLALLNDPDLDVRRGALLLANAAIHHQPALVEDLLAEVITPVLLETVGGALVAACRVRFAXXXXXXXXXXVELKMERVVDLGPFKHRV 475          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S2UZY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZY3_9STRA)

HSP 1 Score: 202 bits (513), Expect = 5.250e-63
Identity = 105/176 (59.66%), Postives = 131/176 (74.43%), Query Frame = 1
Query:   40 KHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVCDVCLVWTLATSLKYCMAG-KAPVEALSPYMEGFLVMLHD-EDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKA 561
            + QYLLL++LKEVI+ HA T GLDFS YV+ VLPH++ HC S EEGVRNMVAECLGALT MHP +L+  LVKL   D  ++ L WTL T+LK+C++  +APV  L P+ME F   L D EDL+ ++A LL+  A  HHQP LV +LLP +V+PAL+ TI L LER+VDLGPFKHK 
Sbjct:    5 RQQYLLLAALKEVIMYHACTAGLDFSLYVEMVLPHLYRHCESPEEGVRNMVAECLGALTSMHPEQLVSGLVKLMEDDANNL-LRWTLITALKHCVSHQRAPVSHLLPHMEKFFQALQDSEDLEARRACLLLATACAHHQPSLVCDLLPPLVVPALFATIDLHLERVVDLGPFKHKV 179          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S2FNG9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FNG9_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.940e-51
Identity = 100/186 (53.76%), Postives = 122/186 (65.59%), Query Frame = 1
Query:    4 LPGILNAFVSSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVCDVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKA 561
            LP IL     S +H YLLLS+LKEV+V HA T   DF  Y+DQV+PH+  H  S EEGVRNMVAECLGAL  MH   ++P L  L   D     + WT+A+SLKY M G  P   L+ ++  FLVMLHD DL V+ +AL M NAAVHHQP L+S  L   +IP LY+T  L ++R+VDLGPFK K 
Sbjct:  897 LPLILTYMARS-RHHYLLLSALKEVLVLHATTSQ-DFGSYIDQVIPHLLKHGQSPEEGVRNMVAECLGALITMHADSIVPMLSGLGSGDQSSPLMQWTIASSLKYSMVGGVPHAILAQHLPQFLVMLHDADLSVRHSALQMCNAAVHHQPSLISPFLKPTIIPVLYETTRLVVKRVVDLGPFKQKV 1080          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S2QZD8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2QZD8_9STRA)

HSP 1 Score: 177 bits (449), Expect = 9.850e-51
Identity = 90/205 (43.90%), Postives = 130/205 (63.41%), Query Frame = 1
Query:    1 YLPGILNAFVS-SVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVC-----------------DVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKA 561
            +LP IL A    S K QYLLLS+L+E+I CH +  G D +  +  +LPH+ THC  +EEGVR MVAECLG+L C+ P  +LP L  L   ++                  D  + WT+A S+K+ +AG+A  E LSP+M  FL +L +++L+VK +ALLMV +AVHH P L++ L+ +++ P LY+   + L+R+VD+GPFKHK 
Sbjct:   53 FLPAILGALEDKSQKDQYLLLSALRELIHCHQLGGGSDIAASIPLILPHLITHCGDKEEGVRTMVAECLGSLVCLQPDVVLPSLQDLVSNNINKSKGSEEKNDNVDGFSHDALICWTVANSIKFAIAGRANTEKLSPFMPKFLELLKEDNLNVKNSALLMVYSAVHHTPQLLAGLMQELISPCLYELAQMNLQRVVDMGPFKHKV 257          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S2XTJ0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTJ0_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.840e-50
Identity = 95/195 (48.72%), Postives = 130/195 (66.67%), Query Frame = 1
Query:    1 YLPGILNAFV-SSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKL---------PGYDVCDVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKH 555
            +LP IL A   +S K QYLLLS+L+E+I CH + DG D S  V ++LPH+  H + +EEGVR M AECLG+L C+HP  + P L  L          G    D  + WT+ATS+K+ +AG+A  + LS YM  FLV+L ++DL VK AALLMV +AVHH P +++ LL + ++P+LY+   L L+R+VDLGPFKH
Sbjct:  691 FLPAILTALEQNSEKKQYLLLSALRELIHCHQLGDGGDISSSVPEILPHLIKHASDKEEGVRTMSAECLGSLACLHPSVVFPTLRDLVVKHGSTSTSGDAEDDALVCWTVATSIKFAIAGRADAKVLSEYMPSFLVLLQNDDLSVKNAALLMVYSAVHHTPAVIAGLLQEHILPSLYELAVLNLKRVVDLGPFKH 885          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7R9VF31_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VF31_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.720e-49
Identity = 95/209 (45.45%), Postives = 132/209 (63.16%), Query Frame = 1
Query:    1 YLPGILNAFVSS-VKHQYLLLSSLKEVIVCHAI------TDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKL----------------PGYDVC-DVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKH 555
            +LP IL+A   +  K QYLLLS+L+E+I CH +          D SP +  +LPH+F HC  EEEGVR MVAECLG+LTC+ P  +LP+L  L                P  +   D  + WT+AT++K+ +AG+A    LSP+M  FLV+L ++DL VK A LLMV +AVHH P LV+ L+ + ++P+L++   L L+R+VDLGPFKH
Sbjct:  221 FLPAILDALEENREKKQYLLLSALRELIHCHQLGGXXXXXSAADISPSIPLILPHLFKHCADEEEGVRTMVAECLGSLTCLQPAVILPQLKDLVEKHSGKNAPQATEEEPSEEAKKDALVCWTVATAVKFAIAGRADPSQLSPFMPSFLVLLREDDLSVKTAGLLMVYSAVHHSPQLVAGLMQEHILPSLHELAILNLKRVVDLGPFKH 429          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: B8C5W6_THAPS (TIP120 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5W6_THAPS)

HSP 1 Score: 172 bits (436), Expect = 3.400e-46
Identity = 91/187 (48.66%), Postives = 123/187 (65.78%), Query Frame = 1
Query:    1 YLPGILNAFV-SSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVCDVCLV-WTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKH 555
            +LP IL A   SS K QYLLLSSL+E I C+   +G D S  V  +LPH+ T+C ++EEGVR MVAECLG+L C+ P  +LP L KL   D     LV WT+  ++K+ + G+     ++P+M  FL++L ++DL VK  ALLMV +AVHH P LV+ L+   ++P +Y+   L LER VDLGPFKH
Sbjct:  956 FLPSILTALEESSGKKQYLLLSSLREFIHCYREVEGSDLSSSVPLILPHLETNCENDEEGVRTMVAECLGSLACLEPKTILPVLEKLTTKDTKKKVLVRWTVGNAVKFAIGGRISPADIAPFMPTFLLLLQEDDLAVKNVALLMVYSAVHHTPQLVAGLMKDQILPNIYELAQLNLERKVDLGPFKH 1142          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S4R363_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R363_9STRA)

HSP 1 Score: 166 bits (420), Expect = 4.700e-44
Identity = 92/202 (45.54%), Postives = 130/202 (64.36%), Query Frame = 1
Query:    1 YLPGILNAFV-SSVKHQYLLLSSLKEVIVCHAI---TDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLP----GYDVCD---------VCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKH 555
            +LP ILNA   +S K QYLLLS+L+E+I C+      DG D S  V  +LPH+ +HC+ +EEGVR MVAEC+G+LTC+ P  +LP L +L     G DV D             WT+AT++K+ +A  A    L+ +M  FL +L + DL V+ AALLMV ++VHH P LV+ L+ + ++P+L++   L L+R+VDLGPFKH
Sbjct:  878 FLPAILNALEQNSQKKQYLLLSALRELIHCYQTGGGADGGDISSSVPLILPHLVSHCSDKEEGVRTMVAECMGSLTCLEPGVMLPHLQELVATHGGKDVDDNEEGGGRKDALSCWTVATAIKFAIAAHADPSKLAGFMPSFLRLLSERDLSVRNAALLMVYSSVHHTPQLVAGLMQEHILPSLHELAQLNLKRVVDLGPFKH 1079          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGI7_ECTSI1.400e-9179.14TIP120 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S2CRP2_9STRA4.220e-6457.07Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A836CDP2_9STRA1.660e-6352.78Armadillo-type protein (Fragment) n=1 Tax=Tribonem... [more]
A0A7S2UZY3_9STRA5.250e-6359.66Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2FNG9_9STRA1.940e-5153.76Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2QZD8_9STRA9.850e-5143.90Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2XTJ0_9STRA2.840e-5048.72Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7R9VF31_9STRA2.720e-4945.45Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
B8C5W6_THAPS3.400e-4648.66TIP120 domain-containing protein (Fragment) n=1 Ta... [more]
A0A7S4R363_9STRA4.700e-4445.54Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67814contigH-elongata_contig67814:120..2785 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score297.4
Seed ortholog evalue5e-78
Seed eggNOG ortholog2880.D8LGI7
Preferred nameCAND1
KEGG koko:K09490,ko:K17263
KEGG TC1.A.33
KEGG Pathwayko03060,ko04141,ko04918,ko05020,map03060,map04141,map04918,map05020
GOsGO:0000003,GO:0000151,GO:0000909,GO:0003002,GO:0003006,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006725,GO:0006807,GO:0007049,GO:0007275,GO:0007389,GO:0008150,GO:0008152,GO:0009404,GO:0009653,GO:0009712,GO:0009719,GO:0009725,GO:0009733,GO:0009791,GO:0009987,GO:0010033,GO:0010051,GO:0010228,GO:0010265,GO:0016020,GO:0016043,GO:0016567,GO:0016999,GO:0017144,GO:0018904,GO:0018940,GO:0018958,GO:0019538,GO:0019748,GO:0019953,GO:0022402,GO:0022414,GO:0022607,GO:0030154,GO:0030312,GO:0030435,GO:0030582,GO:0030584,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0034293,GO:0036211,GO:0042221,GO:0042537,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043385,GO:0043412,GO:0043933,GO:0043934,GO:0043935,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0048608,GO:0048646,GO:0048731,GO:0048856,GO:0048869,GO:0050790,GO:0050896,GO:0051321,GO:0051704,GO:0061458,GO:0065003,GO:0065007,GO:0065009,GO:0070647,GO:0071704,GO:0071840,GO:0071944,GO:0072490,GO:0075259,GO:1900570,GO:1900588,GO:1900591,GO:1900797,GO:1901360,GO:1901564,GO:1901615,GO:1902494,GO:1903046,GO:1990234
EggNOG free text desc.SCF complex assembly
EggNOG OGsKOG1824@1,KOG1824@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Exons4
Model size582
Cds size582
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67814.14395.1prot_H-elongata_contig67814.14395.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig67814 120..2785 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931070.1350315-CDS-H-elongata_contig67814:119..2511622931070.1350315-CDS-H-elongata_contig67814:119..251Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67814 120..251 -
1691679685.5264566-CDS-H-elongata_contig67814:119..2511691679685.5264566-CDS-H-elongata_contig67814:119..251Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67814 120..251 -
1622931070.1530306-CDS-H-elongata_contig67814:886..10461622931070.1530306-CDS-H-elongata_contig67814:886..1046Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67814 887..1046 -
1691679685.5394201-CDS-H-elongata_contig67814:886..10461691679685.5394201-CDS-H-elongata_contig67814:886..1046Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67814 887..1046 -
1622931070.198145-CDS-H-elongata_contig67814:1589..17471622931070.198145-CDS-H-elongata_contig67814:1589..1747Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67814 1590..1747 -
1691679685.5489306-CDS-H-elongata_contig67814:1589..17471691679685.5489306-CDS-H-elongata_contig67814:1589..1747Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67814 1590..1747 -
1622931070.2160835-CDS-H-elongata_contig67814:2653..27851622931070.2160835-CDS-H-elongata_contig67814:2653..2785Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67814 2654..2785 -
1691679685.5579267-CDS-H-elongata_contig67814:2653..27851691679685.5579267-CDS-H-elongata_contig67814:2653..2785Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67814 2654..2785 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig67814.14395.1

>prot_H-elongata_contig67814.14395.1 ID=prot_H-elongata_contig67814.14395.1|Name=mRNA_H-elongata_contig67814.14395.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
YLPGILNAFVSSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMF
THCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVCDVCLVWTL
ATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQ
PFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKALNSTKH*
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mRNA from alignment at H-elongata_contig67814:120..2785-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig67814.14395.1 ID=mRNA_H-elongata_contig67814.14395.1|Name=mRNA_H-elongata_contig67814.14395.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2666bp|location=Sequence derived from alignment at H-elongata_contig67814:120..2785- (Himanthalia elongata Himel1 dioecious)
TACCTCCCCGGGATCCTAAACGCCTTCGTCTCGTCGGTCAAGCACCAGTA CCTCCTCCTATCTTCCCTGAAAGAGGTAATCGTTTGCCACGCCATCACCG ACGGCCTCGACTTCTCCCCCTACGTCGACCAGGTAAACTAATTATGTATG ATGTATGCTGTGGGTATATTTAGTGGGTCTGTATTTATTAAATAAATTGC GCATTGAACCGCCCATTTCGGCCCCTCTGCCATGCTAGGCTTCGAATTAT TAGTAATTCGAGGGTACTCGCATTGGTCCTCCCTCCTTCCCTATGTGGGG GATTGATGCTATTTGTTTGTAAACCCTATTGATGTGTGTGTGTGTGTGTG TGTGTTAAAAAAAAAATGCGTTACGTTTTTGCTTGTTGAAATTATTTAAT TAATTGTTAATGAATGTATTCTTTTAGTTTTACTATTGCACATGTTTTTC AAATTGTTTTAGTTTTCTTCCAGCGATGTACATGATATAGCTCCATCCCG ATGCCATAGACCTTCTTACGCTTGCACACCTAGTAGCTCAAAGTTGTTTG AGTCTGGAGCCCTGTGCTTGCCATAGACCACCGGAGTTGTCGGGGGAGGC GAAAATAATTCGAGGTTTCTACGTGAAAATGAGGCAGAACCCCGCTAAAT ATAGATCCGCCGCTTTTCTTCGCCCATTATCTATTATTAGTAATAGCGAT TGTTTGAACACTTGCCTGGTGCGGCTCTCTTTGAAGCGAAAAGGATTAAT AGAGGAATGCATTGGGGTTGAGAGAGAACCGCCATGTCTGCTACTGAGTA AGTTAGGCGATTCCTCTTCACGAGTAAGATAATTTTTTGCCCTCCGTTCT GTCACGCGACAACCCCTTTTCACGCCCCGCGCGTTCACGCCTCTTTGTTA TTTTTCTCATTATTTTTTGTTTCTATTTTCTCCTTTCATTTCTTCTATTC TTTTTTTTTATTCAAAAATTGTCTGTGGCGATGGCGGGGGGCGGTAATCA ATCGCATGATTCATCGCCTGATTCATCGCCTGATTCAGGTTCTTCCGCAC ATGTTCACGCACTGCACGAGCGAAGAAGAGGGTGTTCGAAACATGGTGGC GGAGTGCCTTGGGGCTCTCACGTGCATGCACCCCTACAGGCTGCTCCCAG AGCTCGTCAAGCTTCCTGGGTACGATGTGTGTGATGTGTGTCTTGTGTGT CTATGGCTGGCATATATATATATATATATATATATGTATATATAGGATAA TATACTTATTTGTTGATGGTACATACTATATTATACAGTACACAGCAGGA CGGCATAGAACAGTATAGATATGGACGCTGTCGCGGAAAACGAGAGTATC CCGGAAGTACATACCCAATTCAGCCTGGGTTGGGAGAATGAGCAGGCTGG TGCGGTTCGGGATAGCCGAACCAATCTCACGAGACCAAATTCTCAGGCGC GAACGGGGACAGGAGAAAATTATTTTCCCTGTTTAGCTGACCACGAGCAG AAGGCACAACCAAATCTGGTTAATCTTACTCTGCTATGTGTGATGACGAC ATACTGCAATACAGTGGACATTAATATTACAGTTGTTATCCAGGTTAAAG GTCGACGCTACTCCTTTATAGAGTTAATCCGTTCAAAGATATTGTGTGTG TGTGTGTTTATTTACTAAATTGCATATAACCGCGTAATCAGGCTCTGTCT TGATCGTGTTTGTGTGTGTGTATGTGTGTGTGTTTTCAGGTGGACCCTTG CGACGTCCCTCAAGTACTGCATGGCCGGCAAGGCTCCGGTGGAGGCCCTC TCGCCCTACATGGAAGGCTTTCTGGTGATGCTGCACGATGAAGACTTGGA CGTTAAGAAGGCGGCCCTTCTGATGGTCAACGCCGCCGTTCATCATCAGG TCAAATAATATTTGTGTACTGTACTAATAACGATACTAATAACGACTATA CACACTATCGAGAAGAATGGAATTAGCCTAATGAATAGCCTAATGAATGG CCTAATGAATCGTGGTCAGCGGGTACCAGTAGCTTGGCGTTTATGTCTCA CGACAAACATGCTAAAATGTGTTTGTCAGTACTAATAATAGCACGATAGG CGGCACTCTTATATACTATATATATAGTATATAAGTAAATATTTATTATT GAGCTTGTAGCGAACGCGCGCGCGCGCGCGCCCGATTTGGGACCAATCTC CCAAGGGCAACCCTCCGTAACGGGGGGGAGGGTGGGAGATACGGGACAAC CGGTGTTGACGCCTCCTTATATAGTGAAACTGGAATTTAAAATATAGTAC ACTTGCTACACCTGATTTTCTTGCGGGAGAGAGACCCTTCTTTCCACTCT TCCAAGCTCGGGTCTCGTGTCATGACGGGAAATTTTAGACATCGCCCGCT TCTTGCCCAAATATCGTAGATGTATAATGTCGTAGGTATTAAAAAAATCG TGCGTGGGCGTGCTTCAAATCGTCGGAGGCATTCTGACCTCAGGGGTCGT GGGTATGTGTTTTTTTGTTTTTTTTGTGACGCAGCCTTTCTTGGTGTCGG AGCTTCTGCCGAAAATGGTCATCCCCGCGCTGTACCAGACGATCGGGCTC AAGTTGGAGAGGATCGTCGACCTCGGGCCGTTCAAGCATAAGGCACTCAA CTCAACGAAGCACTGA
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Coding sequence (CDS) from alignment at H-elongata_contig67814:120..2785-

>mRNA_H-elongata_contig67814.14395.1 ID=mRNA_H-elongata_contig67814.14395.1|Name=mRNA_H-elongata_contig67814.14395.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1164bp|location=Sequence derived from alignment at H-elongata_contig67814:120..2785- (Himanthalia elongata Himel1 dioecious)
TACCTCCCCGGGATCCTAAACGCCTTCGTCTCGTCGGTCAAGCACCAGTA
CCTCCTCCTATCTTCCCTGAAAGAGGTAATCGTTTGCCACGCCATCACCG
ACGGCCTCGACTTCTCCCCCTACGTCGACCAGTACCTCCCCGGGATCCTA
AACGCCTTCGTCTCGTCGGTCAAGCACCAGTACCTCCTCCTATCTTCCCT
GAAAGAGGTAATCGTTTGCCACGCCATCACCGACGGCCTCGACTTCTCCC
CCTACGTCGACCAGGTTCTTCCGCACATGTTCACGCACTGCACGAGCGAA
GAAGAGGGTGTTCGAAACATGGTGGCGGAGTGCCTTGGGGCTCTCACGTG
CATGCACCCCTACAGGCTGCTCCCAGAGCTCGTCAAGCTTCCTGGGTACG
ATGTGTGTGATGTGTGTCTTGTGTTCTTCCGCACATGTTCACGCACTGCA
CGAGCGAAGAAGAGGGTGTTCGAAACATGGTGGCGGAGTGCCTTGGGGCT
CTCACGTGCATGCACCCCTACAGGCTGCTCCCAGAGCTCGTCAAGCTTCC
TGGGTACGATGTGTGTGATGTGTGTCTTGTGTGGACCCTTGCGACGTCCC
TCAAGTACTGCATGGCCGGCAAGGCTCCGGTGGAGGCCCTCTCGCCCTAC
ATGGAAGGCTTTCTGGTGATGCTGCACGATGAAGACTTGGACGTTAAGAA
GGCGGCCCTTCTGATGGTCAACGCCGCCGTTCATCATCAGGTGGACCCTT
GCGACGTCCCTCAAGTACTGCATGGCCGGCAAGGCTCCGGTGGAGGCCCT
CTCGCCCTACATGGAAGGCTTTCTGGTGATGCTGCACGATGAAGACTTGG
ACGTTAAGAAGGCGGCCCTTCTGATGGTCAACGCCGCCGTTCATCATCAG
CCTTTCTTGGTGTCGGAGCTTCTGCCGAAAATGGTCATCCCCGCGCTGTA
CCAGACGATCGGGCTCAAGTTGGAGAGGATCGTCGACCTCGGGCCGTTCA
AGCATAAGGCACTCAACTCAACGAAGCACTGACCTTTCTTGGTGTCGGAG
CTTCTGCCGAAAATGGTCATCCCCGCGCTGTACCAGACGATCGGGCTCAA
GTTGGAGAGGATCGTCGACCTCGGGCCGTTCAAGCATAAGGCACTCAACT
CAACGAAGCACTGA
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