mRNA_H-elongata_contig678.14391.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig678.14391.1 vs. uniprot
Match: D7FSC4_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC4_ECTSI) HSP 1 Score: 1059 bits (2739), Expect = 0.000e+0 Identity = 515/581 (88.64%), Postives = 549/581 (94.49%), Query Frame = 3
Query: 3 EVYVLTSGVHALATQILAPSTRKILQAEGVRNLTPLAFYEWCHEKRGFGKVHIFKDIGLSRAVAMVRQMDDLVTGDDGGDLYRLERNQNF-TMGLDDDISKSKGGDEVAELTHGVSLLADESVHITPGFFQVFRGQAKQAACMIYYSRKDAGTPKISPKAGNMNAAMFPVDDPTSPPLIGPSTIVVVNDARHQLQPDFLQRTTPYFFDVDENSGQYKWAKVAFVQTPQRFRKDLPHDPLGNHAASQYDVINIGKDGIGGVSSSGQGSLWRVEALKGRSPDGKRGVDAKDLSMVGHELGFRAELLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRVKQVLRWHQGAVQLLYLKGLRYTC-GGHFPTVFHRIYAFDQATYYLQAIPGYVLLLMPVVYGISSQSPFNTTITPYFTYFVPFIVTAVLPTVISAQWRSIESHRLTRDEQTWLSTTYVQIYAFLQVTWSKLIRANPEHAWVAKVPTWPLYLVFLAQFAAIAGAIYWTLHDGFEYYYKNTLSICAGAFLGMFYLWPMIALQLGVTKPSFWFFKLGAYVILGVAMVILGQL--FDLQIG 1733
EVY+LTSGVHAL+TQILAPSTRKILQAEGVRNLTPLAFYEWCHEKRGFGKVHIFKD+GLSRAVAMVRQMDDLVTGDDGGDLYRL+RNQ+F GLD+DISKSK GDEV ELTHGVSLLADESVHITPGFFQVFRGQAKQAACMIYYSRKDAGTP+ISPKAGNMNAAMFP+DDPTSPPLIGPSTIVVVNDARHQLQP+FLQRTTPYFFDVD + QYKWAKVAFVQTPQRFRKDLP DPLGNHAASQYDVINIGKDGIG VSSSGQGSLWRVEALKGRSPDGK GVD KDL +VG +LGFRAE+LIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWR+KQVLRWHQGAVQLLY KGLRYT GG FPTVFHR+YAFDQATYYLQAIPGYVLLLMPVVYG++ Q PFNT IT YF+YFVPFIVTAVLPTVISAQWRSI+SHRLTRDEQTWLSTTYVQIYAFLQV+W++LIR NP+HAWVA+VPTWPL LVF AQF AIAGA+YWTLH+GF+ YYKNTLSICAGAFLGMFYLWPM+ALQ+G+ +PSFWFFKLGAYV+LGV+MVILG + DLQIG
Sbjct: 227 EVYMLTSGVHALSTQILAPSTRKILQAEGVRNLTPLAFYEWCHEKRGFGKVHIFKDVGLSRAVAMVRQMDDLVTGDDGGDLYRLDRNQSFLNQGLDEDISKSKEGDEVEELTHGVSLLADESVHITPGFFQVFRGQAKQAACMIYYSRKDAGTPRISPKAGNMNAAMFPIDDPTSPPLIGPSTIVVVNDARHQLQPEFLQRTTPYFFDVDAITQQYKWAKVAFVQTPQRFRKDLPDDPLGNHAASQYDVINIGKDGIGAVSSSGQGSLWRVEALKGRSPDGKTGVDPKDLGLVGKKLGFRAEMLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRIKQVLRWHQGAVQLLYTKGLRYTSFGGSFPTVFHRMYAFDQATYYLQAIPGYVLLLMPVVYGVTGQPPFNTDITSYFSYFVPFIVTAVLPTVISAQWRSIDSHRLTRDEQTWLSTTYVQIYAFLQVSWTRLIRGNPDHAWVARVPTWPLTLVFAAQFVAIAGAVYWTLHNGFDTYYKNTLSICAGAFLGMFYLWPMMALQVGLGRPSFWFFKLGAYVVLGVSMVILGSIPGLDLQIG 807
BLAST of mRNA_H-elongata_contig678.14391.1 vs. uniprot
Match: D7FSC3_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC3_ECTSI) HSP 1 Score: 690 bits (1780), Expect = 8.400e-227 Identity = 350/609 (57.47%), Postives = 432/609 (70.94%), Query Frame = 3
Query: 3 EVYVLTSGVHALATQILAPSTRKILQAEGVRNLTPLAFYEWCHEKRGFGKVHIFKDIGLSRAVAMVRQMDDLVTGDDGGDLYRLERNQN-----------FTMGLDDDISKSKGGDEVAELTHGV------SLLADESVHITPGFFQVF------------RGQAKQAACMIYYSRKDAGTPKISPKAGNMNAAMFPVDDPTSPPLIGPSTIVVVNDARHQLQPDFLQRTTPYFFDVD------ENSGQYKWAKVAFVQTPQRFRKDLPHDPLGNHAASQYDVINIGKDGIGGVSSSGQGSLWRVEALKGRSPDGKRGVDAKDLSMVGHELGFRAELLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRVKQVLRWHQGAVQLLYLKGLRYTC-GGHFPTVFHRIYAFDQATYYLQAIPGYVLLLMPVVYGISSQSPFNTTITPYFTYFVPFIVTAVLPTVISAQWRSIESHRLTRDEQTWLSTTYVQIYAFLQVTWSKLIRANPEHAWVAKVPTWPLYLVFLAQFAAIAGAIYWTLHDGFEYYYKNTLSICAGAFLGMFYLWPMIALQLGVTKPSFWFFKLGAYVILGVAMVILGQLFD 1721
EVY + +GVH + + ++IL AEGV LT F +WC G+ + H++ D L+ AV ++R +D + + D + LE + + S + +AE++ +L +++ITPGFF+V+ + K +IYYSRK+AGTPKISPKAGNMNAA+FPVDDPT PL G STIVVVNDARHQL+ +FLQRT PYFF++ + G+Y+WAKVAFVQTPQRFR +L +DPLGNHA SQYDVIN GKDGIG VSSSGQGSLWRVEALKG+ PDGK D +L +VG +LGFR+E+LIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQP++LTWR+KQVLRWHQGAVQLL KG+RYT GGHFPT++HR+YAFDQATYYLQAIPGYVLL+MP+VYG++ PF T++ YF YF PFIVTA+LPT IS+QWR I+SHRLTRDEQTWLSTTYVQIYAFLQV W+ L R +PE+AWVAKVPTWPL VFL Q A+AG +YW + GF +Y N SI A L M LWPM++L LG + PSF++ KL +V LG + V+L +F+
Sbjct: 406 EVYRVAAGVHRIGELLAGRRIQQILMAEGVTELTQKGFIDWCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCLANGLTDAFALEARPSSATYNPITAAAWNAAAQAQKSNKPSVEAMAEMSDAARSEAEAKMLGASAMNITPGFFEVYGTHLDPDNMETSKEVQKGLPTLIYYSRKNAGTPKISPKAGNMNAAIFPVDDPTMTPLTGESTIVVVNDARHQLEGNFLQRTVPYFFELAGGHPTVASGGRYRWAKVAFVQTPQRFRMELSNDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALKGQRPDGKIVDDPTELDLVGKKLGFRSEMLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPSSLTWRIKQVLRWHQGAVQLLLFKGIRYTSFGGHFPTMWHRLYAFDQATYYLQAIPGYVLLIMPIVYGVTGTPPFVTSLKDYFQYFTPFIVTALLPTAISSQWRKIDSHRLTRDEQTWLSTTYVQIYAFLQVVWTGLTRKSPENAWVAKVPTWPLTFVFLGQVFAVAGGVYWVVQKGFVIWYANFFSIVVVAGLAMHALWPMVSLSLGWSIPSFYYIKLFLWVFLGFSAVVLTNVFN 1014
BLAST of mRNA_H-elongata_contig678.14391.1 vs. uniprot
Match: A0A835YSM9_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM9_9STRA) HSP 1 Score: 634 bits (1636), Expect = 2.820e-208 Identity = 314/567 (55.38%), Postives = 404/567 (71.25%), Query Frame = 3
Query: 15 LTSGVHALATQILAPSTRKILQAEGVRNLTPLAFYEWCHEKRGFGKVHIFKDIGLSRAVAMVRQMDDLVTGDDGG-DLYRLERNQNFTMGLDDDISKSKGGDEVAELTHGVSLLADESVHITPGFFQVFRGQAKQAACMIYYSRKDAGTPKISPKAGNMNAAMFPVDDPTSPPLIGPSTIVVVNDARHQLQPDFLQRTTPYFFDVDENSGQYKWAKVAFVQTPQRFRKDLP-HDPLGNHAASQYDVINIGKDGIGGVSSSGQGSLWRVEALKGRSPDGKRGVDAKDLSMVGHELGFRAELLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRVKQVLRWHQGAVQLLYLKGLRYTC-GGHFPTVFHRIYAFDQATYYLQAIPGYVLLLMPVVYGISSQSPFNTTITPYFTYFVPFIVTAVLPTVISAQWRSIESHRLTRDEQTWLSTTYVQIYAFLQVTWSKLIRANPEHAWVAKVPTWPLYLVFLAQFAAIAGAIYWTLHDGFEYYYKNTLSICAGAFLGMFYLWPMIALQLGVTKPSFWFFKLGAYVILGVAMVIL 1706
+ + V+ALAT + P+ ILQAEGV+ +T FYEW G+ + H++ D L++A ++ M++ + ++ LE G D SK + A H + L +V I PG+ Q F IYY+R+DAGTPK+SPKAGNMNAA+F +D P PPLIG STIVVVND RHQLQP+FLQRT PYFF++D + +Y+WAKVAFVQTPQRF+ + DPLGNHAA QYDVIN GKDGIG VSSSGQGSLWRV ALKG DG++ D + S++GH LGFR+E+LIEDTHTSIE+FR GW S YVNEPGE L+ CTHQP ++ WR+KQVLRWHQGAVQLL+ KG+ +TC GG FPT+FHRIYAFDQATYYLQAIPGY+LLLMP++YG++ + PFNT + +F +F PFIVTA+LPTVIS WR ++SHRLTRDEQ WLSTTYVQIYAFL + W ++ + AW + PTWPL++VF +FAAI GA+ W +GFE + N +SI A L + LWPM++LQ+G PS ++ KL A++I+G+ +V++
Sbjct: 236 MAAAVYALATIVRHPNVLSILQAEGVQAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEAANEAVAMSVFGLEELPAGVKGKQDVKRNSKKTTQ-ATANHMLQALNVGNVTIEPGYVQTFNTNVALPT-FIYYTRRDAGTPKVSPKAGNMNAALFALDYPDMPPLIGNSTIVVVNDCRHQLQPEFLQRTIPYFFELDADGQRYRWAKVAFVQTPQRFQTNQQADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGQQYADTQQRSLIGHRLGFRSEMLIEDTHTSIEMFRAGWGSRYVNEPGEHLSMCTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTCWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVTGEPPFNTKVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTDDAWAVRAPTWPLFVVFAGEFAAIVGAMIWVSKEGFEKWAANLISIIVSASLAIHALWPMVSLQMGWQVPSLYYLKLMAWLIIGIFIVVI 800
BLAST of mRNA_H-elongata_contig678.14391.1 vs. uniprot
Match: A0A836CP13_9STRA (Glyco_trans_2-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP13_9STRA) HSP 1 Score: 622 bits (1605), Expect = 2.630e-200 Identity = 309/567 (54.50%), Postives = 397/567 (70.02%), Query Frame = 3
Query: 15 LTSGVHALATQILAPSTRKILQAEGVRNLTPLAFYEWCHEKRGFGKVHIFKDIGLSRAVAMVRQMDDLVTGDDGG-DLYRLERNQNFTMGLDDDISKSKGGDEVAELTHGVSLLADESVHITPGFFQVFRGQAKQAACMIYYSRKDAGTPKISPKAGNMNAAMFPVDDPTSPPLIGPSTIVVVNDARHQLQPDFLQRTTPYFFDVDENSGQYKWAKVAFVQTPQRFRKDLP-HDPLGNHAASQYDVINIGKDGIGGVSSSGQGSLWRVEALKGRSPDGKRGVDAKDLSMVGHELGFRAELLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRVKQVLRWHQGAVQLLYLKGLRYTC-GGHFPTVFHRIYAFDQATYYLQAIPGYVLLLMPVVYGISSQSPFNTTITPYFTYFVPFIVTAVLPTVISAQWRSIESHRLTRDEQTWLSTTYVQIYAFLQVTWSKLIRANPEHAWVAKVPTWPLYLVFLAQFAAIAGAIYWTLHDGFEYYYKNTLSICAGAFLGMFYLWPMIALQLGVTKPSFWFFKLGAYVILGVAMVIL 1706
+ + V+ALAT + P+ ILQAEGV +T FYEW G+ + H++ D L++A ++ M++ + + ++ LE G D SK + A + + +V I PG+ Q F +IYY+R+DAGTPK+SPKAGNMN+A+F +D P PPLIG STIVVVND RHQLQP+FLQRT PYFF++D + +Y+WAKVAFVQTPQRF ++ DPLGNHAA QYDVIN GKDGIG VSSSGQGSLWRV ALKG DG D K+ +VGH LGFR+E+LIEDTHTSIE+FR GW S YVNEPGE L+ CTHQP ++ WR+KQVLRWHQGAVQLL+ KG+ +T GG FPT+FHRIYAFDQATYYLQAIPGY+LLLMP++YG+ Q PFNTT+ +F +F PFIVTA+LPTVIS WR ++SHRLTRDEQ WLSTTYVQIYAFL + W ++ AW + PTWPL+ VF +F AI GA+ W +GFE + N + + A L + LWPM++LQ+G PS ++ KL A++++G+ +V++
Sbjct: 491 MAAAVYALATIVRHPNVLSILQAEGVHAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEASTEAVAMSVFGLEELPAGVKGKQDVKRNSKKTTQ-ASANSMLQAMNVGNVTIEPGYVQTFNTNVALPT-LIYYTRRDAGTPKVSPKAGNMNSALFALDYPDMPPLIGSSTIVVVNDCRHQLQPEFLQRTVPYFFELDADGQRYRWAKVAFVQTPQRFTNNVQADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGNSYADVKERGLVGHRLGFRSEMLIEDTHTSIEMFRAGWSSRYVNEPGEHLSICTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTVWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVCGQPPFNTTVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTADAWAVRAPTWPLFAVFAGEFGAIIGALVWVSQEGFERWAANLICVIVSASLAIHALWPMVSLQMGWQVPSLYYLKLLAWLLIGIFIVLI 1055
BLAST of mRNA_H-elongata_contig678.14391.1 vs. uniprot
Match: A0A835YVP7_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP7_9STRA) HSP 1 Score: 578 bits (1489), Expect = 3.710e-187 Identity = 289/570 (50.70%), Postives = 388/570 (68.07%), Query Frame = 3
Query: 21 SGVHALATQILAPSTRKILQAEGVRNLTPLAFYEWCHEKRGFGKVHIFKDIGLSRAVAMVRQMD--DLVTGDDGGDLYRLERNQNFTMGLDDDISKSKGGDEVAELTHGVSLLADESVHITPGFFQVFRGQAKQAACMIYYSRKDAGTPKISPKAGNMNAAMFPVDDPTSPPLIGPSTIVVVNDARHQLQPDFLQRTTPYFFDVDENSG-----QYKWAKVAFVQTPQRFRKDL--PHDPLGNHAASQYDVINIGKDGIGGVSSSGQGSLWRVEALKGRSPDGKRGVDAKDLSMVGHELGFRAELLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRVKQVLRWHQGAVQLLYLKGLRYTC-GGHFPTVFHRIYAFDQATYYLQAIPGYVLLLMPVVYGISSQSPFNTTITPYFTYFVPFIVTAVLPTVISAQWRSIESHRLTRDEQTWLSTTYVQIYAFLQVTWSKLIRANPEHAWVAKVPTWPLYLVFLAQFAAIAGAIYWTLHDGFEYYYKNTLSICAGAFLGMFYLWPMIALQLGVTKPSFWFFKLGAYVILGVAMV 1700
+ V+ALAT +PS +ILQAE ++ YEW + G + H++ D L+RA ++ M L G++G L+ L + D K + + E + + I P F Q F ++YY+R+D GTP++SPKAGNMN+A+FP+D P L+G STI+ VND RHQLQP+FLQRT PYFF + +++ +Y W +VAFVQTPQRF KD+ DPLGN+AA QYD+IN GKDGIG VSSSG GSLWRVEALKG + DG R D + +++G E+GFR+E+LIEDTHTSI++FR GW S YVNEPGE L+ CTHQP ++ WR+KQVLRWHQGAVQLL+ KG+ +T GG FPT++HR+YAFDQATYYLQAIPGY+LLLMP++YGI+ +SPFNT + +F +F P+IV+A+LPT+IS WR +++++L RDEQ WLSTTYVQ+YAFL + + L E+AW K PTWPL+ VF +F AI GA++W GF+ + +N LS+ A A L +F LWPM+A+Q+G PS + K+ + LGV +V
Sbjct: 153 AAVYALATLARSPSIVQILQAENAASIDAKGLYEWWRDGGGHARRHLYNDSHLNRACQLLEFMLRLSLCEGNEGN-LFNLTEMPEDQLQSPD--QKKRSARHLVEGLLQALNIPQGAAKIPPAFMQSFSTNGALPT-LVYYTRRDPGTPRVSPKAGNMNSALFPIDYPDDESLVGDSTIIAVNDCRHQLQPNFLQRTVPYFFKLQQSANDGSGLEYTWDRVAFVQTPQRFPKDMNAEDDPLGNNAAVQYDIINHGKDGIGAVSSSGHGSLWRVEALKGLAADGTRYADPTNRALIGSEVGFRSEMLIEDTHTSIDMFRHGWTSRYVNEPGEHLSTCTHQPDSIAWRIKQVLRWHQGAVQLLFYKGITFTSFGGKFPTIWHRVYAFDQATYYLQAIPGYILLLMPIIYGITGESPFNTEVAEFFLFFTPYIVSAMLPTLISGSWRGVDANKLQRDEQVWLSTTYVQVYAFLSMLATALRCQKHENAWAVKAPTWPLFAVFFGEFCAIGGALFWVARYGFDRWSQNLLSVLASAALAVFALWPMVAMQMGWRIPSAYHLKVLVWATLGVLVV 718
BLAST of mRNA_H-elongata_contig678.14391.1 vs. uniprot
Match: A0A835ZCE1_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE1_9STRA) HSP 1 Score: 569 bits (1467), Expect = 3.000e-181 Identity = 295/599 (49.25%), Postives = 383/599 (63.94%), Query Frame = 3
Query: 15 LTSGVHALATQILAPSTRKILQAEGVRNLTPLAFYEWCHEKRGFGKVHIFKDIGLSRAVAMVRQMDDLV-TGDDGGDLYRLERNQNFTMGLDDDISKSKG--GDEVAELTHGVSLLADESV-----------------------HITPGFFQVFRGQAKQAACMIYYSRKDAGTPKISPKAGNMNAAMFPVDDPTSPPLIGPSTIVVVNDARHQLQPDFLQRTTPYFFDVDENSGQYKWAKVAFVQTPQRFRKDLP--HDPLGNHAASQYDVINIGKDGIGGVSSSGQGSLWRVEALKGRSPDGKRGVDAKDLSMVGHELGFRAELLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRVKQVLRWHQGAVQLLYLKGLRYTC-GGHFPTVFHRIYAFDQATYYLQAIPGYVLLLMPVVYGISSQSPFNTTITPYFTYFVPFIVTAVLPTVISAQWRSIESHRLTRDEQTWLSTTYVQIYAFLQVTWSKLIRANPEHAWVAKVPTWPLYLVFLAQFAAIAGAIYWTLHDGFEYYYKNTLSICAGAFLGMFYLWPMIALQLGVTKPSFWFFKLGAYVILGVAMVILGQLFDL 1724
+T+ V+AL T I P ILQAEG+ FY+W G+ + H++ D L++A ++ M+ G+D ++ L M +D G +V E S+L ++ + G+ F ++YY+RKDAGTP++SPKAGN+NAA+F VD P PLIG +TIVVVND RHQL P FLQRT PYFF++D Y WA+VAFVQTPQRF+ D DPLGNHAA QYDVIN GKDGIG VSSSG GSLWRVEAL+G DG+R D + +G LGFR+++LIEDTHTSI++FR GW S YVNEPGE L+ CTHQP ++ WR+KQVLRWHQGAVQLL+ KG+ YT GG FPT++HRIYAFDQATYYLQAIPGY+LLLMP++YG++ SPF T + +F YF P+IVT +LPTVIS W +++++L RDEQ WLSTTYVQIYAFL + W+ L E+AW K PTWPL+ VF Q AA+ G ++W GF + +N +S+ A A L M LWPM++LQ+G PS + K+ + +LG +V++ L L
Sbjct: 366 MTAAVYALGTLIRNPEVVTILQAEGIDAENVKGFYDWWKFGGGYARKHLYNDPWLNKACLLLEYMEKHAGNGEDADSIFLLS-----DMPIDAAAGSKAALHGKDVEEFAR--SMLQALNIPTPSPDAGXXXXXXXXXXXXXXXXVDAGYVHQFSSNP-DLPTLLYYTRKDAGTPRVSPKAGNLNAAIFAVDYPEDDPLIGDATIVVVNDCRHQLNPTFLQRTVPYFFELDAEGQHYGWARVAFVQTPQRFKPDQMTLDDPLGNHAAVQYDVINRGKDGIGAVSSSGHGSLWRVEALRGADVDGRRYADPTVVDNIGKTLGFRSQMLIEDTHTSIDMFRHGWTSRYVNEPGEHLSICTHQPNSIAWRIKQVLRWHQGAVQLLFYKGISYTSFGGRFPTLWHRIYAFDQATYYLQAIPGYILLLMPIIYGLTGNSPFETRVADFFLYFTPYIVTGMLPTVISGSWGDVDANKLQRDEQVWLSTTYVQIYAFLSMLWTSLRCQKHENAWAIKAPTWPLFTVFFGQVAALGGGLFWVGKYGFRAWAQNLISVFASALLCMHALWPMVSLQMGWKIPSMYIIKILVWALLGGFIVLINHLSKL 956
BLAST of mRNA_H-elongata_contig678.14391.1 vs. uniprot
Match: A0A835YHN4_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHN4_9STRA) HSP 1 Score: 532 bits (1370), Expect = 2.420e-168 Identity = 294/637 (46.15%), Postives = 383/637 (60.13%), Query Frame = 3
Query: 6 VYVLTSGVHALATQILAPSTRKILQAEGVRNLTPLAFYEWCHEKRGFGKVHIFKDIGLSRAVAMVRQMDDLVTGDDGGDLYRLERNQNFTMGLDDDISKSKGGD-EVAELTH---GVSLLAD---ESVHITPGFFQVFRGQAKQAACMIYYSRKDAGTPKISPKAGNMNAAMFPVDDPTSPPLIGPSTIVVVNDARHQLQPDFLQRTTPYFFDVDENSGQYKWAKVAFVQTPQRF----RKDLPHDPLGNHAASQYDVINIGKDGIGGVSSSGQGSLWRVEALKGRSPDGKRGVDAKDLSMVGHELGFRAELLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRVKQVLRWHQGAVQLLYLKGLRYT----CGGHFPTVFHRIYAFDQATYYLQAIPGYVLLLMPVVYGISSQSPFNTTITPYFTYFVPFIVTAVLPTVISAQWRSIESHRLTRDEQTWLSTTYVQIYAFLQVTWSKLIRANPEHAWVAKVPTWPLYLVFLAQFAAIAGAIYWTLHDGFE-------------------------------------------------------------YYYKNTLSICAGAFLGMFYLWPMIALQLGVTKPSFWFFKLGAYVILG 1688
V LT+ + LA +L P ++ILQ EGV +L + + W G + + L A++ MDD+ ++GG T G D SK + + EV + ++ + L D +V I PG+ + + + +IYYSRK+ GTPK+SPKAGNMNAA+FP+D P PLIG STIVVV+D RHQLQPDFLQRT PYFF++ + S Y WAKVAFVQTPQRF KD DPLGNHAA QYDVIN GKDGIG V SSG GSLWRV AL+G +G+ D +L +VGH+LGFR+E+LIEDTHTS+E+FR GWRSVY+NEP E L+ CTHQP N+ WR+KQVLRWHQGAVQLL+ KG YT C +PT++HR+Y FDQ TYY+QAIPGY+LL+MP+VYG++ Q+PF+ TI +F F+PFIVTAVLPTVI ++ RL+RDEQ WLSTTY+Q+YAF +TW A AW K PTWPL++ F +F AI G ++W +++ F+ ++ N +S+ A A + +F LWPM+A+Q G S + KL AYVI+G
Sbjct: 202 VLALTAAAYKLAECMLNPELQRILQFEGVLSLNAIDVFAWWKTGGGHARQFLHDHDLLYEICAIMELMDDIAKNENGG---------KGTWGKPKDPSKVRHFNLEVGDKSYFEKNRATLEDIIMPNVTIDPGYIKTYES-SDLLPRVIYYSRKEPGTPKVSPKAGNMNAAIFPIDYPEQVPLIGDSTIVVVDDCRHQLQPDFLQRTVPYFFELHKPSNTYTWAKVAFVQTPQRFPFQKEKD---DPLGNHAAMQYDVINHGKDGIGAVGSSGHGSLWRVAALRGLDANGRCYADPSNLRLVGHKLGFRSEMLIEDTHTSLEMFRAGWRSVYINEPNENLSVCTHQPDNIAWRIKQVLRWHQGAVQLLWFKGPWYTTFSPCA-QYPTMWHRLYGFDQCTYYMQAIPGYMLLVMPIVYGVTGQAPFSATIFDFFVRFIPFIVTAVLPTVILGNRPGVDMDRLSRDEQVWLSTTYIQMYAFFSMTWQIFTCAKAGDAWTVKAPTWPLFVAFYGEFLAILGGLFWLIYNNFQNNRIQNNSSNAAEAFNINSNKEQIRINNLRPDLINEATKNSTQLRMTNEFIISNLIGYPQIQWFLNFISVVASAAMAIFALWPMVAMQKGWKPLSLYQSKLVAYVIVG 824
BLAST of mRNA_H-elongata_contig678.14391.1 vs. uniprot
Match: A0A835YIK8_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIK8_9STRA) HSP 1 Score: 423 bits (1088), Expect = 3.370e-129 Identity = 258/579 (44.56%), Postives = 342/579 (59.07%), Query Frame = 3
Query: 3 EVYVLTSGVHALATQILAPSTRKILQAEGVRNLTPLAFYEWCHEKRGFGKVHIFKD-IGLSRAVAMVRQMDDLVTGDDGGDLYRLERNQNFTMGLDDDISKSKGGDEVAEL-THGVSLLADESVHITPGFFQVFRGQAKQAACMIYYSRKDAGTPKISPKAGNMNAAMFPVDDPTSPPLIGPSTIVVVNDARHQLQPDFLQRTTPYFFDVD-ENSGQYKWAKVAFVQTPQRFRKDLPH----DPLGNHAASQYDVINIGKDGIGGVSSSGQGSLWRVEALK-GRSPDGKRGVDAKD--LSMVGHE--LGFRAELLIEDTHTSIELFRQGWRSVYVNEP----GEVLAWCTHQPTNLTWRVKQVLRWHQGAVQLLYLKGLRYTCG-GHFPTVFHRIYAFDQATYYLQAIPGYVLLLMPVVYGISSQSPFNTTITPYFTYFVPFIVTAVLPTVISAQWRSIESHRLTRDEQTWLSTTYVQIYAFLQVTWSKLIRANPEHAWVAKVPTWPLYLVFLAQFAA-IAGAIYWTLHDGFEYYYKNTLSICAGAFLGMFYLWPMIALQLGVTKPSFWFFKLGAYVIL 1685
+V L S V+ LA +L R IL+ E V T AFYE + G + + D + R VA+V ++D L+ DG ++RL+ ++ + S + I+PGF + + A+ ++Y+SR DAG P++SPKAGNMN A+F D LI + ++VVNDARH LQP+FLQR PYFF D +G Y WA VAFVQTPQRF D+P DPLGN AA+Q+D++N G+DG GV S GQGSLWRV AL+ G PDG + +D K ++G LGFR+E+LIEDTHTS++L RQGWRSVYV P GEVLA CT P ++TWRVKQVLRWHQGAVQL G Y G GH+ + + R++A D TY LQA G +LL+ P+VYG ++QSPFN + TYF PF++TA LPT+ + W S R+ RDEQ W +TTYVQ+ A V W KL+R +P AW A P WPLY FLA AA +A YW + GF + + AG F + LWP+++ LGVT P ++ ++ +IL
Sbjct: 124 QVQQLASLVYTLAEVVLDKGVRDILRREEVPASTARAFYELFSD--GLRRHTMNTDNLMFVRGVAIVDEIDKLLHDSDGS-VHRLDGTATTSLAPPXXXXXXXXXXXXXXVRARRASCFVQNT--ISPGFTKTWAKNARLPT-LVYHSRTDAGMPRVSPKAGNMNCAIFRKDG-KGETLIAGAAVIVVNDARHALQPEFLQRALPYFFTRDARRAGAYVWADVAFVQTPQRF-DDVPQWADPDPLGNQAATQFDIVNPGRDGASGVLSCGQGSLWRVAALRDGIRPDGSKYIDTKADREGLIGRTGGLGFRSEVLIEDTHTSLDLLRQGWRSVYVVSPASSKGEVLARCTLPPDSVTWRVKQVLRWHQGAVQLALSHGFAYVFGSGHWASPWQRVFALDAITYVLQAFAGQILLVFPIVYGFTNQSPFNALNLQFATYFFPFLITAALPTMAALGWLKTSSDRVMRDEQVWFATTYVQLQAVCNVIWCKLLRRDPADAWTATCPVWPLYAQFLAIAAAMVANTGYW-IQRGFTSPWVWVSCMGAGLF-ALHSLWPLVSFGLGVTLPPAYYNRVFGMLIL 692
BLAST of mRNA_H-elongata_contig678.14391.1 vs. uniprot
Match: D7FIF6_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF6_ECTSI) HSP 1 Score: 432 bits (1111), Expect = 3.500e-123 Identity = 249/584 (42.64%), Postives = 345/584 (59.08%), Query Frame = 3
Query: 3 EVYVLTSGVHALATQILAPSTRKILQAEGVRNLTPLAFYEWCHEKRGFGKVHIFKDIGLSRAVAMVRQMDDLVTGDDGGDLYRLERNQNFTMGLDDDISKSKGGDEVAELTHGVSLLADESVHITPGFFQVFRGQAKQAACMIYYSRKDAGTPKISPKAGNMNAAMFPVDDPTSPPLIGPSTIVVVNDARHQLQPDFLQRTTPYFFDVDENSGQYKWAKVAFVQTPQRF--RKDLPH-DPLGNHAASQYDVINIGKDGIGGVSSSGQGSLWRVEALK-GRSPDG----KRGVDAKDLSMVGHELGFRAELLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRVKQVLRWHQGAVQLLYLKGLRYTC-GGHFPTVFHRIYAFDQATYYLQAIPGYVLLLMPVVYGISSQSPFNTTITPYFTYFVPFIVTAVLPTVISAQWRSIESHRLTRDEQTWLSTTYVQIYAFLQVTWSKLIRANPEHAWVAKVPTWPLYLVFLAQFAAIAGAIYWTLHDGFEYYYKNT---LSICAGAFLGMFYLWPMIALQLGVTKPSFWFFKL-GAYVILG-VAMVILGQ 1712
EV+ L S V+ L+ +L + R+IL EGV ++ FYE H G ++ D+ R + +V ++D L+ E + N + S S + E S + I PG +V+ + K ++YYSR DAG P+ISPKAGNMN A+F + P PLIG + ++V+ND RH+L P+FLQRT PYFF D+ YKWA +AF+QTPQRF R D DPLGN AA+Q+D++N G+DG GG S GQGS+WRV+ L+ G PDG K+G+ + G LGFRAE+LIEDTHTSI+LFRQGW+SVYVN P E LA CT P + WR KQVLRWHQGAVQL KG Y G ++ T F +++AFD +Y+LQA G +LL+ P+VYG ++ +PFNT + YF PFI+T VLPTV + W+ S ++ RDEQ W +T++VQIYA + W + R +P +AW K P WPLYL F AI A+ + D Y+ +S A + LWP+++ LGVT P ++ ++ G V++ V++ +LG+
Sbjct: 1459 EVHKLVSLVYTLSEVVLDKTVREILMREGVAPISAKGFYE--HFANGEHGQRMYDDVNFIRGIEVVSEIDKLIA----------ENDDNISR-----FSPSVAISRIKERARRASCF--DRKEIQPGQKKVWN-RNKYIPTIVYYSRIDAGQPRISPKAGNMNRAIFSFN-PQEEPLIGEAAVIVINDVRHELYPEFLQRTVPYFFTFDKPRRCYKWANIAFIQTPQRFHDRTDWNDPDPLGNQAATQFDIVNSGRDGAGGALSCGQGSVWRVQVLRDGIRPDGTKFVKKGMPEDQVGQQGG-LGFRAEVLIEDTHTSIDLFRQGWKSVYVNFPNERLACCTLPPDTVKWRWKQVLRWHQGAVQLAMWKGWGYAVLGENWGTTFQKVFAFDAVSYFLQAFAGEILLIFPIVYGFTNSAPFNTWNIEFALYFFPFIITGVLPTVAALGWQKTPSAKVMRDEQIWFATSFVQIYAVMHAVWGTITRKDPSNAWECKCPVWPLYL----HFVAITIAVCFNTADWAARSYEEPWVWVSCIGSALFALHSLWPVVSFGLGVTMPEAFYTRVFGMLVVMTLVSLWLLGE 2016
BLAST of mRNA_H-elongata_contig678.14391.1 vs. uniprot
Match: D8LMC3_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMC3_ECTSI) HSP 1 Score: 414 bits (1065), Expect = 1.200e-118 Identity = 215/463 (46.44%), Postives = 303/463 (65.44%), Query Frame = 3
Query: 339 GVSLLADESVHITPGFFQVFRGQAKQAACMIYYSRKDAGTPKISPKAGNMNAAMFPVDDPTSPPLIG-PSTIVVVNDARHQLQPDFLQRTTPYFFDVDENSGQ-YKWAKVAFVQTPQRFRKDLPHDPLGNHAASQYDVINIGKDGIGGVSSSGQGSLWRVEALKGRSPDGKRGVDA-KDLSMVGHELGFRAELLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRVKQVLRWHQGAVQLLYLKGLRYTCGGHFPTVFHRIYAFDQATYYLQAIPGYVLLLMPVVYGISSQSPFNTTITPYFTYFVPFIVTAVLPTVISAQWRSIESHRLTRDEQTWLSTTYVQIYAFLQVTWSKLIRANPEHAWVAKVPTWPLYLVF-LAQFAAIAGAIYWTLHDGFEYYYKNTLSICAGAF----LGMFYLWPMIALQLG--VTKPSFWFFKLGAYVILGVAM 1697
G A + GF ++FR + MIY +R + GTPK+SPKAGNMNAA+FP + P P+IG P+ +VVVNDARH+L+ +FLQRT PYFF +D +G+ Y+WA V FVQTPQRF DPLGNHA + V N+ KDG+GGV+S GQGSLWRV+AL+G + DGK+ VD+ +VGH+ GFRAE+LIEDTHTS+E F+Q WRS YV E GE LA C QP + WRVKQV RWH GAVQLL G+ + C PT H+++ D TYY+QA+ G+ ++LMP+++ I ++PFNT + +F P+I+TA +PT+++ W+++ +R+ DEQ WLST YVQI+AF W+++ ANP++AW P WPL L+F L +AI +YW + F+ ++ + I +F + M+ +WPM+ L V+ PS + K Y+++ +A+
Sbjct: 1071 GKKKAAKALPRLEEGFKKLFRS-SPNIPSMIYSARANPGTPKVSPKAGNMNAAIFP-NSPGEEPVIGDPARVVVVNDARHRLKTEFLQRTVPYFFKLDRRTGKKYEWADVGFVQTPQRFEDLGDGDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALRGMAADGKQVVDSVAKPDIVGHDCGFRAEVLIEDTHTSLEFFKQQWRSAYVCEAGETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGVGFLCTSRMPTPLHKMFGLDSLTYYIQAVGGFFIILMPIMFSIFQETPFNTVDLEFVYFFFPYIITATIPTILAVGWKNVNPNRVLTDEQFWLSTCYVQIWAFALGVWNRITCANPDNAWNLVCPVWPLGLLFGLLIVSAINTTVYWAFYLSFD---EDGIWIFLASFGACIVVMYSIWPMVKLWWPGWVSLPSAYHQKF-CYILIFIAL 1527 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig678.14391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig678.14391.1 >prot_H-elongata_contig678.14391.1 ID=prot_H-elongata_contig678.14391.1|Name=mRNA_H-elongata_contig678.14391.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=514bp MVRQMDDLVTGDDGGDLYRLERNQNFTMGLDDDISKSKGGDEVAELTHGVback to top mRNA from alignment at H-elongata_contig678:1365..8740+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig678.14391.1 ID=mRNA_H-elongata_contig678.14391.1|Name=mRNA_H-elongata_contig678.14391.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7376bp|location=Sequence derived from alignment at H-elongata_contig678:1365..8740+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig678:1365..8740+ >mRNA_H-elongata_contig678.14391.1 ID=mRNA_H-elongata_contig678.14391.1|Name=mRNA_H-elongata_contig678.14391.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3084bp|location=Sequence derived from alignment at H-elongata_contig678:1365..8740+ (Himanthalia elongata Himel1 dioecious)back to top |