prot_H-elongata_contig67795.14388.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67795.14388.1
Unique Nameprot_H-elongata_contig67795.14388.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length178
Homology
BLAST of mRNA_H-elongata_contig67795.14388.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 3.070e-27
Identity = 74/184 (40.22%), Postives = 104/184 (56.52%), Query Frame = 0
Query:    2 VRSTARAAARSKDLVVATWNVRTMSERGTNGPGH-AEDLLMFAAKYECNIIAIQETRRDGRTTIQAPAADYVIHCSGHCDGDGGKPGILGVGLTVRQSIARALGPDGIVPEHISARLLKVRVIFKHKAATTFIVGCAPTETAATCH------KSRFCKELRSTIAEVPASDHLILMMDANARTG 178
            V++TA+  AR  DL   T+NVRT++  G N  GH    ++   A  +C++I +QETRR G+  I      YVI  SG   G   K G+ GVG+ +++++  ++G  G   E IS RL+KVR+        TF+VG APTETA          K  F   L + I EV + DHL+++MDANARTG
Sbjct:   77 VKATAKKKAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICAATDCDVIGLQETRRAGQGAITHDG--YVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTG 258          
BLAST of mRNA_H-elongata_contig67795.14388.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 5.780e-27
Identity = 72/184 (39.13%), Postives = 104/184 (56.52%), Query Frame = 0
Query:    2 VRSTARAAARSKDLVVATWNVRTMSERGTNGPGH-AEDLLMFAAKYECNIIAIQETRRDGRTTIQAPAADYVIHCSGHCDGDGGKPGILGVGLTVRQSIARALGPDGIVPEHISARLLKVRVIFKHKAATTFIVGCAPTETAATCH------KSRFCKELRSTIAEVPASDHLILMMDANARTG 178
            V++ A+  AR  DL   T+NVRT++  G N  GH    ++   +   C++I +QETRR G+ +I      YVI  SG   G   K G+ GVG+ +++++  ++G +G   E IS RL+KVR+        TF+VG APTET  T        K  F   L + I EV + DHL+++MDANARTG
Sbjct:  162 VKAAAKKKAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDG--YVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 343          
BLAST of mRNA_H-elongata_contig67795.14388.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 8.860e-27
Identity = 72/184 (39.13%), Postives = 104/184 (56.52%), Query Frame = 0
Query:    2 VRSTARAAARSKDLVVATWNVRTMSERGTNGPGH-AEDLLMFAAKYECNIIAIQETRRDGRTTIQAPAADYVIHCSGHCDGDGGKPGILGVGLTVRQSIARALGPDGIVPEHISARLLKVRVIFKHKAATTFIVGCAPTETAATCH------KSRFCKELRSTIAEVPASDHLILMMDANARTG 178
            V++ A+  AR  DL   T+NVRT++  G N  GH    ++   +   C++I +QETRR G+ +I      YVI  SG   G   K G+ GVG+ +++++  ++G +G   E IS RL+KVR+        TF+VG APTET  T        K  F   L + I EV + DHL+++MDANARTG
Sbjct:   73 VKAAAKKKAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDG--YVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 254          
BLAST of mRNA_H-elongata_contig67795.14388.1 vs. uniprot
Match: A0A6H5K6P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P8_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.740e-26
Identity = 70/184 (38.04%), Postives = 103/184 (55.98%), Query Frame = 0
Query:    2 VRSTARAAARSKDLVVATWNVRTMSERGTNGPGH-AEDLLMFAAKYECNIIAIQETRRDGRTTIQAPAADYVIHCSGHCDGDGGKPGILGVGLTVRQSIARALGPDGIVPEHISARLLKVRVIFKHKAATTFIVGCAPTETAATCH------KSRFCKELRSTIAEVPASDHLILMMDANARTG 178
            V++ A+  AR  DL   T+N+RT+     N  GH    ++   +   C+++ +QE RRDG+ +I  P   YVI  SG   G   K G+ GVG+ +++++  ++G +G   E IS RL+KVR+        TF+VG APTET  T        K  F   L + I EV + DHL+++MDANARTG
Sbjct:   12 VKAAAKKKAREGDLSFGTFNLRTLHYSDRNPIGHNVMTVMQICSATGCDVVGLQENRRDGQGSI--PHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLLVLMDANARTG 193          
BLAST of mRNA_H-elongata_contig67795.14388.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 3.830e-26
Identity = 70/184 (38.04%), Postives = 103/184 (55.98%), Query Frame = 0
Query:    2 VRSTARAAARSKDLVVATWNVRTMSERGTNGPGH-AEDLLMFAAKYECNIIAIQETRRDGRTTIQAPAADYVIHCSGHCDGDGGKPGILGVGLTVRQSIARALGPDGIVPEHISARLLKVRVIFKHKAATTFIVGCAPTETAATCH------KSRFCKELRSTIAEVPASDHLILMMDANARTG 178
            V++ A+  AR  DL   T+NVRT++  G N  GH    ++   +   C++I +QETRR+G+ +I      YVI  SG   G   K G+ GVG+ +++++  ++G +G   E I  RL+KVR+        TF+V  APTET  T        K  F   L + I EV + DHL+++MDANARTG
Sbjct:  135 VKAAAKKKAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDG--YVIIWSGARAGTKDKRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRIGRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTG 316          
BLAST of mRNA_H-elongata_contig67795.14388.1 vs. uniprot
Match: A0A6H5K5A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A7_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 4.980e-26
Identity = 71/184 (38.59%), Postives = 104/184 (56.52%), Query Frame = 0
Query:    2 VRSTARAAARSKDLVVATWNVRTMSERGTNGPGH-AEDLLMFAAKYECNIIAIQETRRDGRTTIQAPAADYVIHCSGHCDGDGGKPGILGVGLTVRQSIARALGPDGIVPEHISARLLKVRVIFKHKAATTFIVGCAPTETAATCH------KSRFCKELRSTIAEVPASDHLILMMDANARTG 178
            V++ A+  AR  DL   T+NVRT++  G N  GH    ++   +   C++I +QETRR+G+ +I      YVI  SG   G   K G+ GVG+ +++++  ++G +G   E IS RL+KVR+   H      +VG APTET  T        K  F   L + I EV + DHL+++MDANARTG
Sbjct:  120 VKAAAKKKAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQIWSATGCDVIGLQETRREGQGSIAHDG--YVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGHTCGVISVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 301          
BLAST of mRNA_H-elongata_contig67795.14388.1 vs. uniprot
Match: A0A6H5J6W7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6W7_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.600e-25
Identity = 69/184 (37.50%), Postives = 103/184 (55.98%), Query Frame = 0
Query:    2 VRSTARAAARSKDLVVATWNVRTMSERGTNGPGH-AEDLLMFAAKYECNIIAIQETRRDGRTTIQAPAADYVIHCSGHCDGDGGKPGILGVGLTVRQSIARALGPDGIVPEHISARLLKVRVIFKHKAATTFIVGCAPTETAATCH------KSRFCKELRSTIAEVPASDHLILMMDANARTG 178
            V++ A+  AR  DL   T+NVRT++  G N  GH    ++   +   C+++ + ETRR+G+ +I      YVI  SG   G   K G+ G+G+ +++ +  ++G +G   E IS RL+KVR+        TF+VG APTET  T        K  F   L + I EV + DHL+++MDANARTG
Sbjct:   24 VKAAAKKKAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVVGLHETRREGQGSIAHDG--YVIIWSGARAGTKEKRGVHGMGIAIKEVMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 205          
BLAST of mRNA_H-elongata_contig67795.14388.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.820e-25
Identity = 70/184 (38.04%), Postives = 102/184 (55.43%), Query Frame = 0
Query:    2 VRSTARAAARSKDLVVATWNVRTMSERGTNGPGH-AEDLLMFAAKYECNIIAIQETRRDGRTTIQAPAADYVIHCSGHCDGDGGKPGILGVGLTVRQSIARALGPDGIVPEHISARLLKVRVIFKHKAATTFIVGCAPTETAATCH------KSRFCKELRSTIAEVPASDHLILMMDANARTG 178
            V++ A+  AR  DL   T+NVRT++  G N  GH    ++   +   C++I +QETRR G+ +I      YVI  SG   G   K G+ GVG+ +++++  ++G +G   E I  RL+KVR+         F+VG APTET  T        K  F   L + I EV + DHL+++MDANARTG
Sbjct:   68 VKAAAKRKAREGDLSFGTFNVRTLACSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDG--YVIIWSGARAGTKDKRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 249          
BLAST of mRNA_H-elongata_contig67795.14388.1 vs. uniprot
Match: A0A6H5JGX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX2_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 4.130e-25
Identity = 69/183 (37.70%), Postives = 102/183 (55.74%), Query Frame = 0
Query:    2 VRSTARAAARSKDLVVATWNVRTMSERGTNGPGH-AEDLLMFAAKYECNIIAIQETRRDGRTTIQAPAADYVIHCSGHCDGDGGKPGILGVGLTVRQSIARALGPDGIVPEHISARLLKVRVIFKHKAATTFIVGCAPTETAATCH------KSRFCKELRSTIAEVPASDHLILMMDANART 177
            V++ A+  AR  DL    +NVRT++  G    GH    ++   +   C++I +QETRR+G+ +I      YVI  SG   G   K G+ GVG+ +++++  ++G +G   E IS RL+KVR+        TF+VG APTET  T        K  F   L + I EV + DHL+++MDANART
Sbjct:   46 VKAAAKKKAREGDLSFGAFNVRTLAYSGRKPIGHNVMTIMQICSATGCDVIGLQETRREGQGSIAHDG--YVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANART 226          
BLAST of mRNA_H-elongata_contig67795.14388.1 vs. uniprot
Match: A0A6H5K0W6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0W6_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.490e-24
Identity = 70/184 (38.04%), Postives = 102/184 (55.43%), Query Frame = 0
Query:    2 VRSTARAAARSKDLVVATWNVRTMSERGTNGPGH-AEDLLMFAAKYECNIIAIQETRRDGRTTIQAPAADYVIHCSGHCDGDGGKPGILGVGLTVRQSIARALGPDGIVPEHISARLLKVRVIFKHKAATTFIVGCAPTETAATCH------KSRFCKELRSTIAEVPASDHLILMMDANARTG 178
            V++ A+  AR  DL   T+NVRT++  G N  GH    ++   +   C++I +QETRR+G+ +I      YVI  SG   G   K G+ GVG+ +++ +  ++G +G   E  S RL+KVR+        TF+VG A TET  T        K  F   L + I EV + DHL+++MDANARTG
Sbjct:  807 VKAAAKKMAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDG--YVIIWSGARAGTKDKRGVHGVGIAIKEVMWESVGEEGRTVECSSPRLMKVRLQIGRTCRVTFVVGYALTETVRTTAGRDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 988          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67795.14388.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQH5_9PHAE3.070e-2740.22Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K3Q1_9PHAE5.780e-2739.13Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JMB4_9PHAE8.860e-2739.13Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K6P8_9PHAE1.740e-2638.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L660_9PHAE3.830e-2638.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A7_9PHAE4.980e-2638.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J6W7_9PHAE1.600e-2537.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KV75_9PHAE1.820e-2538.04Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JGX2_9PHAE4.130e-2537.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0W6_9PHAE1.490e-2438.04Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 9..178
e-value: 1.7E-11
score: 46.4
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 13..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67795contigH-elongata_contig67795:59..592 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67795.14388.1mRNA_H-elongata_contig67795.14388.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67795 59..592 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67795.14388.1 ID=prot_H-elongata_contig67795.14388.1|Name=mRNA_H-elongata_contig67795.14388.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
LVRSTARAAARSKDLVVATWNVRTMSERGTNGPGHAEDLLMFAAKYECNI
IAIQETRRDGRTTIQAPAADYVIHCSGHCDGDGGKPGILGVGLTVRQSIA
RALGPDGIVPEHISARLLKVRVIFKHKAATTFIVGCAPTETAATCHKSRF
CKELRSTIAEVPASDHLILMMDANARTG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf