prot_H-elongata_contig67735.14385.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67735.14385.1
Unique Nameprot_H-elongata_contig67735.14385.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length46
Homology
BLAST of mRNA_H-elongata_contig67735.14385.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 5.850e-11
Identity = 26/42 (61.90%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    3 DGACDPQNLIPECEWDGGDCCRCTCEDEAYICGSDGFVCIDP 44
            DG CD +N   EC WDGGDCC CTC D  Y CG  GF C+DP
Sbjct: 1979 DGWCDLENNNAECNWDGGDCCECTCVDSQYECGIQGFSCLDP 2020          
BLAST of mRNA_H-elongata_contig67735.14385.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 8.010e-11
Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    3 DGACDPQNLIPECEWDGGDCCRCTCEDEAYICGSDGFVCIDP 44
            DG CD  N   ECE+DGGDCC CTC+++ Y CG  GF C+DP
Sbjct:   39 DGECDTHNNNAECEYDGGDCCSCTCQNDTYDCGVSGFDCVDP 80          
BLAST of mRNA_H-elongata_contig67735.14385.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 3.820e-10
Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MGDGACDPQNLIPECEWDGGDCCRCTCED-EAYICGSDGFVCIDP 44
            M DG CD  N  P C++DGGDCC C+C D   Y CGS+GF C+DP
Sbjct:  156 MNDGYCDSSNNYPSCDYDGGDCCECSCVDGHDYECGSNGFSCLDP 200          
BLAST of mRNA_H-elongata_contig67735.14385.1 vs. uniprot
Match: D7FV90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV90_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 2.490e-9
Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 0
Query:    1 MGDGACDPQNLIPECEWDGGDCCRCTCEDEAYICGSDGFVCIDP 44
            MG+G C P+N IPECE+DGGDCC C+C+   Y+C    F C+DP
Sbjct:  162 MGNGLCIPENNIPECEYDGGDCCECSCQPAQYMCLG-RFDCLDP 204          
BLAST of mRNA_H-elongata_contig67735.14385.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.190e-8
Identity = 24/44 (54.55%), Postives = 28/44 (63.64%), Query Frame = 0
Query:    1 MGDGACDPQNLIPECEWDGGDCCRCTCEDEAYICGSDGFVCIDP 44
            +GDG C  +N    C++DGGDCC CTC D  Y CG   F CIDP
Sbjct:   74 IGDGFCSDENNNEVCDYDGGDCCECTCVDAFYPCGYVAFACIDP 117          
BLAST of mRNA_H-elongata_contig67735.14385.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.630e-8
Identity = 25/44 (56.82%), Postives = 27/44 (61.36%), Query Frame = 0
Query:    1 MGDGACDPQNLIPECEWDGGDCCRCTCEDEAYICGSDGFVCIDP 44
            +GDG CD  N   EC+WDGGDCC CTC    Y CG   F C DP
Sbjct:  318 IGDGHCDYYNNNEECDWDGGDCCACTCVSGYYTCGYYTFDCEDP 361          
BLAST of mRNA_H-elongata_contig67735.14385.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 2.210e-8
Identity = 25/49 (51.02%), Postives = 29/49 (59.18%), Query Frame = 0
Query:    1 MGDGACDPQNLIPECEWDGGDCCRCTCEDE----AYICGSDGFVCIDPD 45
            +G+G CD  N  PEC +DGGDCC CTCE       Y C    F CIDP+
Sbjct:  242 IGNGYCDDSNNSPECAYDGGDCCECTCESHDDGYEYYCEPGSFACIDPE 290          
BLAST of mRNA_H-elongata_contig67735.14385.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 3.050e-8
Identity = 25/45 (55.56%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    1 MGDGACDPQNLIPECEWDGGDCCRCTCEDEAYI-CGSDGFVCIDP 44
            +GDG+CD  N   EC+WDGGDCC CTCE  +Y  C S    C DP
Sbjct:  231 IGDGSCDYYNNNEECDWDGGDCCSCTCEGSSYYSCSSYSMDCQDP 275          
BLAST of mRNA_H-elongata_contig67735.14385.1 vs. uniprot
Match: D7G2E3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E3_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 1.090e-7
Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    1 MGDGACDPQNLIPECEWDGGDCCRCTCEDEAY----ICGSDGF-VCIDP 44
            +G+G CDP+N   EC++DGGDCC CTC+        +C SD F  CIDP
Sbjct:   36 IGNGECDPRNNKEECDYDGGDCCECTCDPSLGTSDDLCKSDSFYACIDP 84          
BLAST of mRNA_H-elongata_contig67735.14385.1 vs. uniprot
Match: A0A1R2AT64_9CILI (EGF-like domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AT64_9CILI)

HSP 1 Score: 54.7 bits (130), Expect = 1.990e-7
Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 0
Query:    1 MGDGACDPQNLIPECEWDGGDCCRCTCEDEA-----YICGSDGFVCIDPDE 46
            M DG CD  N I EC++DGGDCCR TCE        Y CGS G+ C++  E
Sbjct:   50 MSDGKCDVFNNIKECDYDGGDCCRFTCEKNCEGKCLYACGSMGYDCLEDTE 100          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67735.14385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FHG7_ECTSI5.850e-1161.90LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JTT4_9PHAE8.010e-1159.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5Y7_ECTSI3.820e-1057.78Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FV90_ECTSI2.490e-956.82Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KJK5_9PHAE1.190e-854.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVP4_9PHAE1.630e-856.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEP6_ECTSI2.210e-851.02Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
D7FX77_ECTSI3.050e-855.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2E3_ECTSI1.090e-751.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1R2AT64_9CILI1.990e-750.98EGF-like domain-containing protein n=1 Tax=Stentor... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainPFAMPF00066Notchcoord: 2..22
e-value: 1.0E-4
score: 22.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67735contigH-elongata_contig67735:2607..2744 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67735.14385.1mRNA_H-elongata_contig67735.14385.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67735 2607..2744 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67735.14385.1 ID=prot_H-elongata_contig67735.14385.1|Name=mRNA_H-elongata_contig67735.14385.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=46bp
MGDGACDPQNLIPECEWDGGDCCRCTCEDEAYICGSDGFVCIDPDE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom