mRNA_H-elongata_contig67706.14379.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig67706.14379.1 vs. uniprot
Match: D7FJC6_ECTSI (LL-diaminopimelate aminotransferase diaminopimelate aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJC6_ECTSI) HSP 1 Score: 216 bits (550), Expect = 2.920e-66 Identity = 102/117 (87.18%), Postives = 111/117 (94.87%), Query Frame = 1
Query: 22 GASVFPKSGGMACLDDDGLSEIEELMDYYLENAKILKEGIESCGFKAHGGKDSPYVYVDLDGRPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAVLA 372
GAS +SGGM CLDD+G++EI+ LMDYYLENAKILKEGIESCGFK+HGGKD+PYVYVDL+G+ SWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAVLA
Sbjct: 352 GASNIVQSGGMTCLDDEGMAEIDTLMDYYLENAKILKEGIESCGFKSHGGKDAPYVYVDLEGKASWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAVLA 468
BLAST of mRNA_H-elongata_contig67706.14379.1 vs. uniprot
Match: A0A835YZU2_9STRA (LL-diaminopimelate aminotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU2_9STRA) HSP 1 Score: 187 bits (475), Expect = 3.280e-55 Identity = 87/113 (76.99%), Postives = 100/113 (88.50%), Query Frame = 1
Query: 22 GASVFPKSGGMACLDDDGLSEIEELMDYYLENAKILKEGIESCGFKAHGGKDSPYVYVDLDGRPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLR 360
GAS ++GG+ACLDD GL+EI LMDYYL+NA ILK+GIESCGFKA+GG DSPYV+VDL+G+ SWD+FS ILE AQVVTIPGAGFGPGGEGFLRLSAFAP+ESC EAV RL+
Sbjct: 338 GASNIVQAGGLACLDDAGLAEINNLMDYYLDNAVILKKGIESCGFKAYGGLDSPYVFVDLEGKSSWDMFSNILENAQVVTIPGAGFGPGGEGFLRLSAFAPKESCKEAVSRLQ 450
BLAST of mRNA_H-elongata_contig67706.14379.1 vs. uniprot
Match: A0A7S2FD30_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FD30_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.080e-54 Identity = 80/113 (70.80%), Postives = 97/113 (85.84%), Query Frame = 1
Query: 22 GASVFPKSGGMACLDDDGLSEIEELMDYYLENAKILKEGIESCGFKAHGGKDSPYVYVDLDGRPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLR 360
GAS + GGMACLDD GL+EI L+DYYLENAKILK+G E GF+ HGG D+PYV++DL+G+ SWD+FS+IL +A VVTIPGAGFGPGGEGFLRLSAFAPR+SC+EA+ RL+
Sbjct: 83 GASNVVQGGGMACLDDAGLTEINTLIDYYLENAKILKKGAEEMGFQVHGGDDAPYVFIDLEGKSSWDMFSKILTEADVVTIPGAGFGPGGEGFLRLSAFAPRDSCIEAIARLK 195
BLAST of mRNA_H-elongata_contig67706.14379.1 vs. uniprot
Match: A0A7S0J6K4_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J6K4_9EUKA) HSP 1 Score: 168 bits (425), Expect = 2.240e-51 Identity = 76/115 (66.09%), Postives = 95/115 (82.61%), Query Frame = 1
Query: 22 GASVFPKSGGMACLDDDGLSEIEELMDYYLENAKILKEGIESCGFKAHGGKDSPYVYVDLDGRPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAV 366
GAS +SG +ACLDD+GL+EI+EL+DYY+ NA +L+E G HGG D+PYV+VDL+G+ SWD+FS +LE+AQVVTIPGAGFGPGGEGFLRLSAFAPR +C EA +RLRA+
Sbjct: 27 GASRIVQSGALACLDDEGLAEIDELIDYYMGNANLLRETCVELGLTVHGGIDAPYVFVDLEGKSSWDMFSRLLEEAQVVTIPGAGFGPGGEGFLRLSAFAPRAACEEACKRLRAI 141
BLAST of mRNA_H-elongata_contig67706.14379.1 vs. uniprot
Match: A0A8J5XM91_DIALT (Aminotran_1_2 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XM91_DIALT) HSP 1 Score: 176 bits (446), Expect = 5.340e-51 Identity = 82/126 (65.08%), Postives = 99/126 (78.57%), Query Frame = 1
Query: 4 DWKSKL-----GASVFPKSGGMACLDDDGLSEIEELMDYYLENAKILKEGIESCGFKAHGGKDSPYVYVDLDGRPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAV 366
DW + GAS + GG+ACLDD+GL EI L+DYYL+NAK+L+E +E+ GF HGG D+PY++VDL G+ SWD+FS ILE AQVVTIPGAGFGPGGEGFLRLSAFAPR +CVEA ERL A+
Sbjct: 317 DWNRVMCTIFNGASNIVQGGGLACLDDEGLEEISTLIDYYLDNAKLLRETMEALGFTVHGGADAPYIFVDLKGKSSWDMFSHILETAQVVTIPGAGFGPGGEGFLRLSAFAPRAACVEACERLTAM 442
BLAST of mRNA_H-elongata_contig67706.14379.1 vs. uniprot
Match: A0A7S3I222_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3I222_9SPIT) HSP 1 Score: 167 bits (423), Expect = 4.700e-50 Identity = 76/115 (66.09%), Postives = 97/115 (84.35%), Query Frame = 1
Query: 22 GASVFPKSGGMACLDDDGLSEIEELMDYYLENAKILKEGIESCGFKAHGGKDSPYVYVDLDGRPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAV 366
GAS ++GG+ACLDD+GL+EI+EL+DYY+ NA +L++ + G HGG D+PYV+VDL+G+ SW++FS+ILE+AQVVTIPGAGFGPGGEGFLRLSAFAPRESC EA +RL V
Sbjct: 101 GASRVVQAGGLACLDDEGLAEIKELIDYYMGNAALLRQTMLDLGLTVHGGTDAPYVFVDLEGKSSWEMFSKILEEAQVVTIPGAGFGPGGEGFLRLSAFAPRESCEEACKRLSKV 215
BLAST of mRNA_H-elongata_contig67706.14379.1 vs. uniprot
Match: B8BT02_THAPS (Aspartate aminotransferase n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8BT02_THAPS) HSP 1 Score: 172 bits (436), Expect = 7.550e-50 Identity = 80/117 (68.38%), Postives = 99/117 (84.62%), Query Frame = 1
Query: 22 GASVFPKSGGMACLDDDGLSEIEELMDYYLENAKILKEGIESCGFKAHGGKDSPYVYVDL-DGRPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAVL 369
GAS + GG+ACLDD+GL+EI+ L+DYYLENAK+LKE +ES G+K +GG D+PYV+V L +G+ SWD FSEILEKAQVVTIPGAGFGPGGEG+LRLSAFAPR++ +EA RL+ L
Sbjct: 292 GASNIVQGGGLACLDDEGLAEIDTLIDYYLENAKLLKEAMESIGYKVYGGTDAPYVFVKLPEGKSSWDTFSEILEKAQVVTIPGAGFGPGGEGYLRLSAFAPRDTVIEACSRLKETL 408
BLAST of mRNA_H-elongata_contig67706.14379.1 vs. uniprot
Match: A0A7S3C5E4_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C5E4_9EUKA) HSP 1 Score: 171 bits (433), Expect = 4.240e-49 Identity = 76/117 (64.96%), Postives = 97/117 (82.91%), Query Frame = 1
Query: 22 GASVFPKSGGMACLDDDGLSEIEELMDYYLENAKILKEGIESCGFKAHGGKDSPYVYVDLDGRPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAVLA 372
GAS ++G +ACLD DG++EI L+DYY+ENA +L++ + G HGG D+PYV+VDL+G+ SWD+FS+ILE+AQVVTIPGAGFGPGGEGFLRLSAFAPRESC+EA +RLR +A
Sbjct: 325 GASNIVQAGALACLDPDGMAEISALIDYYMENAALLRQAMVDIGLTVHGGTDAPYVFVDLEGKSSWDMFSKILEEAQVVTIPGAGFGPGGEGFLRLSAFAPRESCIEACDRLRKAMA 441
BLAST of mRNA_H-elongata_contig67706.14379.1 vs. uniprot
Match: A0A7S0A1P4_9STRA (Hypothetical protein n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0A1P4_9STRA) HSP 1 Score: 171 bits (432), Expect = 5.960e-49 Identity = 78/113 (69.03%), Postives = 96/113 (84.96%), Query Frame = 1
Query: 22 GASVFPKSGGMACLDDDGLSEIEELMDYYLENAKILKEGIESCGFKAHGGKDSPYVYVDLDGRPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLR 360
GAS ++GGMACLDD+GL EI+ L+DYYLENA +L+E +ES G+ +GG D+PYV+V L G+ SWD FSEILEKAQVVTIPGAGFGPGGEG+LRLSAFAPR+S +EA +RL+
Sbjct: 326 GASNIVQAGGMACLDDEGLKEIDNLIDYYLENAAMLRETMESIGYTVYGGTDAPYVFVALKGKSSWDTFSEILEKAQVVTIPGAGFGPGGEGYLRLSAFAPRDSIIEACKRLK 438
BLAST of mRNA_H-elongata_contig67706.14379.1 vs. uniprot
Match: A0A7R9UFW6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFW6_9STRA) HSP 1 Score: 171 bits (432), Expect = 6.080e-49 Identity = 73/112 (65.18%), Postives = 96/112 (85.71%), Query Frame = 1
Query: 22 GASVFPKSGGMACLDDDGLSEIEELMDYYLENAKILKEGIESCGFKAHGGKDSPYVYVDLDGRPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERL 357
GAS + GGM+CLDD+GL+EIE L++YYLENAK+++E +E GF GG D+PY++VDL GR SWD+FSE++EKA VVT+PGAGFGPGGEGFLRLS+FA RE+C+EA++R+
Sbjct: 323 GASNIVQEGGMSCLDDEGLAEIEVLINYYLENAKLMREKLEGAGFTVFGGTDAPYIFVDLQGRSSWDMFSEVMEKANVVTVPGAGFGPGGEGFLRLSSFASRENCIEAMDRI 434 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67706.14379.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig67706.14379.1 >prot_H-elongata_contig67706.14379.1 ID=prot_H-elongata_contig67706.14379.1|Name=mRNA_H-elongata_contig67706.14379.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp MDWKSKLGASVFPKSGGMACLDDDGLSEIEELMDYYLENAKILKEGIESCback to top mRNA from alignment at H-elongata_contig67706:100..2064- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig67706.14379.1 ID=mRNA_H-elongata_contig67706.14379.1|Name=mRNA_H-elongata_contig67706.14379.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1965bp|location=Sequence derived from alignment at H-elongata_contig67706:100..2064- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig67706:100..2064- >mRNA_H-elongata_contig67706.14379.1 ID=mRNA_H-elongata_contig67706.14379.1|Name=mRNA_H-elongata_contig67706.14379.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=750bp|location=Sequence derived from alignment at H-elongata_contig67706:100..2064- (Himanthalia elongata Himel1 dioecious)back to top |