prot_H-elongata_contig67674.14374.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67674.14374.1
Unique Nameprot_H-elongata_contig67674.14374.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length156
Homology
BLAST of mRNA_H-elongata_contig67674.14374.1 vs. uniprot
Match: D8LI42_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI42_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 1.470e-64
Identity = 119/158 (75.32%), Postives = 125/158 (79.11%), Query Frame = 0
Query:    1 HPAFVKLCVDAGLPSNLVHCLRIMRVVEFESAMHEG---GRAPEAGGVRRGGDGGTPEVCDGFSLPRSAASPGTASPDRPLTQRATERIGRLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVIEALMAGSLNSSMVWLLHYNK 155
            HPAFVKLCVDAGLPSNLVHCLRIMRVVEFESAM +G   G    A G    GDGG  E     + P  +   G    DRP T+RATERIG+LLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAV+EALM G LNSSMVWLLHYNK
Sbjct:  276 HPAFVKLCVDAGLPSNLVHCLRIMRVVEFESAMRDGTGGGGGTTAAGSFGAGDGGDDEASGDEARPSPSLPEGD---DRPQTKRATERIGKLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVVEALMGGCLNSSMVWLLHYNK 430          
BLAST of mRNA_H-elongata_contig67674.14374.1 vs. uniprot
Match: A0A6H5KQH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH9_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 3.430e-61
Identity = 117/158 (74.05%), Postives = 123/158 (77.85%), Query Frame = 0
Query:    1 HPAFVKLCVDAGLPSNLVHCLRIMRVVEFESAMHEG---GRAPEAGGVRRGGDGGTPEVCDGFSLPRSAASPGTASPDRPLTQRATERIGRLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVIEALMAGSLNSSMVWLLHYNK 155
            HPAFVKLCVDAGLPSNLVHCLRIMRVVEFESAM +G          G    GDGG  E     + P S + P     DRP T+RATERIG+LLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETAR V+EALM G LNSSMVWLLHYNK
Sbjct:  329 HPAFVKLCVDAGLPSNLVHCLRIMRVVEFESAMRDGTGGXXXXXXXGSFGAGDGGDDEPSGDEARP-SPSLP--EDDDRPQTKRATERIGKLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARTVVEALMGGCLNSSMVWLLHYNK 483          
BLAST of mRNA_H-elongata_contig67674.14374.1 vs. uniprot
Match: A0A1E7FHH9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHH9_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.310e-20
Identity = 55/153 (35.95%), Postives = 84/153 (54.90%), Query Frame = 0
Query:    4 FVKLCVDAGLPSNLVHCLRIMRVVEFESAMHEGGRAPEAGGVRRGGDGGTPEVCDGFSLPRSAASPGTASPDRPLTQRATERIGRLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVIEALMAGSLNSSMVWLLHYNKV 156
            FV  C++  LP N++HCLR++RV+E + A                            +     A   T  P +P++ RAT ++ +LL TLC+D+S  VGEQ++PHL GLL+L+ ++YP +G HV + A  VI A     L++S+VW LH  K+
Sbjct:   91 FVMRCLENELPPNMIHCLRLLRVLELQHAAQ--------------------------TYKEYEAQGKTDQPIKPISSRATGKVSQLLCTLCTDQS--VGEQLRPHLFGLLALSGASYPRSGVHVAKAASQVIIAFAQYCLSNSLVWFLHDRKM 215          
BLAST of mRNA_H-elongata_contig67674.14374.1 vs. uniprot
Match: B5Y3B7_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3B7_PHATC)

HSP 1 Score: 94.7 bits (234), Expect = 1.170e-19
Identity = 61/167 (36.53%), Postives = 88/167 (52.69%), Query Frame = 0
Query:    1 HPAFVKLCVDAGLPSNLVHCLRIMRVVEFESAMHEGGRAPEAGGVRRGG----DGGTPEVCDGFSLPRSAASP-GTASPD------RPLTQRATERIGRLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVIEALMAGSLNSSMVWLLHYNKV 156
            H  FV  CV+  LP NLVHCLR++RV+E + A  E   A E+   +       +G   E  +     +   +P G    D      +P+   AT+++ +LL  LC D S  VGEQ++PHL GL +L+ ++YPP+G HV   A  VI A     LN  +VW +H  K+
Sbjct:  148 HEKFVLRCVENELPPNLVHCLRLLRVLELQHASGEVENAKESQVTKHDSVENEEGTADEAMEKEDQHQEEENPVGEIESDTSSAVLQPIGLVATQKVSKLLCQLCRDPS--VGEQLRPHLFGLFALSGASYPPSGLHVALAASDVIVAFSEHCLNRQLVWFIHDRKM 312          
BLAST of mRNA_H-elongata_contig67674.14374.1 vs. uniprot
Match: A0A7S3Q415_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q415_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.460e-17
Identity = 51/149 (34.23%), Postives = 76/149 (51.01%), Query Frame = 0
Query:    4 FVKLCVDAGLPSNLVHCLRIMRVVEFESAMHEGGRAPEAGGVRRGGDGGTPEVCDGFSLPRSAASPGTASPDRPLTQRATERIGRLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVIEALMAGSLNSSMVWLLH 152
            F+  C++  LP NL+HC+R++RVVE ++A  +                                        R +++ ATE++ +LL  LC D  A VGEQ++PHL GLL+L+ + YP NG HV   A  VI +   G L++S+VW LH
Sbjct:  219 FILRCMENELPPNLIHCMRLLRVVELKAAHSQSAXXXXXXXXXX--------XXXXXXXXXXXXXXXXPQKVRSVSKAATEKVQKLLSLLCGD--ASVGEQLRPHLFGLLALSGARYPINGVHVARAASKVIVSFSKGCLSTSLVWFLH 357          
BLAST of mRNA_H-elongata_contig67674.14374.1 vs. uniprot
Match: A0A448Z2Q0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z2Q0_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 6.420e-15
Identity = 49/153 (32.03%), Postives = 79/153 (51.63%), Query Frame = 0
Query:    4 FVKLCVDAGLPSNLVHCLRIMRVVEFESAMHEGGRAPEAGGVRRGGDGGTPEVCDGFSLPRSAASPGTASPDRPLTQRATERIGRLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVIEALMAGSLNSSMVWLLHYNKV 156
            ++  C++  LP N++HCLR++RV+E + A          G V +                          P +P++ RAT ++ +LL  LC++ S  VGEQ++ HL GLL+L+ ++YP +G HV   A  VI A     L++S+V  LH  K+
Sbjct:  146 YLMRCLENELPPNMIHCLRLLRVLELQHAAETYKEYEAQGKVDQ--------------------------PIKPISSRATAKVSQLLCNLCTNPS--VGEQLRLHLFGLLALSGASYPSSGVHVARAASQVIIAFAQNCLSNSLVLFLHDRKM 270          
BLAST of mRNA_H-elongata_contig67674.14374.1 vs. uniprot
Match: A0A7S4S7R3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S7R3_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.400e-13
Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 0
Query:   66 AASPGTASPDR-PLTQRATERIGRLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVIEALMAGSLNSSMVWLLHYNKV 156
            A S  T  PD  P++  AT ++ RLL  LCSD S  VGEQ++PHL GLL+L+ ++YPP+G H+   A +VI +     L++S+VW LH  K+
Sbjct:   75 AHSVSTPQPDPGPVSTLATAKVARLLCLLCSDPS--VGEQLRPHLFGLLALSGASYPPSGIHIASAASSVILSFSENCLSASLVWFLHDRKM 164          
BLAST of mRNA_H-elongata_contig67674.14374.1 vs. uniprot
Match: A0A7S1YSP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YSP2_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.810e-12
Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = 0
Query:   82 ATERIGRLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVIEALMAGSLNSSMVWLLHYNKV 156
            AT ++ RLL  LCSD S  VGEQ++PHL GLL+L+ ++YPP+G H+   A +VI +     L++S+VW LH  K+
Sbjct:    4 ATAKVTRLLCLLCSDPS--VGEQLRPHLFGLLALSGASYPPSGIHIASAASSVILSFSENCLSASLVWFLHDRKM 76          
BLAST of mRNA_H-elongata_contig67674.14374.1 vs. uniprot
Match: A0A7S1CTZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CTZ4_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 5.640e-12
Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 0
Query:   74 PDRPLTQRATERIGRLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVIEALMAGSLNSSMVWLLHYNKV 156
            P  PL+ +A  ++ +LL  LCSD S  VGEQ++PHL GLL+L+ ++YP +G H+   A  VI A     L++S+VW LH  K+
Sbjct:    7 PASPLSTQAAAKVSKLLCLLCSDPS--VGEQLRPHLFGLLALSGASYPNSGVHIAAAASDVILAFSRSCLSASLVWFLHDRKM 87          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67674.14374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LI42_ECTSI1.470e-6475.32Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KQH9_9PHAE3.430e-6174.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1E7FHH9_9STRA1.310e-2035.95Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
B5Y3B7_PHATC1.170e-1936.53Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7S3Q415_9STRA2.460e-1734.23Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A448Z2Q0_9STRA6.420e-1532.03Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4S7R3_9STRA1.400e-1345.65Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1YSP2_9STRA2.810e-1248.00Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S1CTZ4_9STRA5.640e-1244.58Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67674contigH-elongata_contig67674:2609..3076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67674.14374.1mRNA_H-elongata_contig67674.14374.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67674 2609..3076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67674.14374.1 ID=prot_H-elongata_contig67674.14374.1|Name=mRNA_H-elongata_contig67674.14374.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
HPAFVKLCVDAGLPSNLVHCLRIMRVVEFESAMHEGGRAPEAGGVRRGGD
GGTPEVCDGFSLPRSAASPGTASPDRPLTQRATERIGRLLVTLCSDKSAG
VGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVIEALMAGSLNSSMVWL
LHYNKV
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