mRNA_H-elongata_contig67462.14356.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig67462.14356.1 vs. uniprot
Match: K7ZUA3_ASCNO (Vanadium-dependent bromoperoxidase 2 n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=K7ZUA3_ASCNO) HSP 1 Score: 141 bits (355), Expect = 3.060e-37 Identity = 65/91 (71.43%), Postives = 76/91 (83.52%), Query Frame = 1
Query: 1 PPCLGQLSNNDVADQQTQPLLSGSVCPVRDTLDFLDPKERAKVTFKRRVDIAKEELAVGPTCHLNNGDEDNIPDFAGQFHKTLPHDGLGQV 273
PPCL Q N ++AD QT+PLLSGSVC VRDT+DFL P +RAK+TFKRR+ IA ELAVGPTCHLNNGDE N+P F GQFHK+LPHD +G+V
Sbjct: 17 PPCLSQTVN-ELADMQTRPLLSGSVCRVRDTVDFLSPTKRAKITFKRRIGIAAGELAVGPTCHLNNGDEANVPLFDGQFHKSLPHDDVGRV 106
BLAST of mRNA_H-elongata_contig67462.14356.1 vs. uniprot
Match: D8LTP5_ECTSI (Vanadium-dependent bromoperoxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP5_ECTSI) HSP 1 Score: 137 bits (345), Expect = 7.640e-36 Identity = 63/93 (67.74%), Postives = 71/93 (76.34%), Query Frame = 1
Query: 1 PPCLGQLSNNDVADQQTQPLLSGSVCPVRDTLDFLDPKERAKVTFKRRVDIAKEELAVGPTCHLNNGDEDNIPDFAGQFHKTLPHDGLGQVRR 279
PPCLG SN + Q T PLLSGSVC VRD+LDFL P ERAKVT ++RVD AKEE VGPTCH+ NGDE N+PDF GQFHK+LPHD G V +
Sbjct: 15 PPCLGATSNEE--HQPTHPLLSGSVCRVRDSLDFLSPTERAKVTLQKRVDTAKEEFQVGPTCHITNGDETNVPDFIGQFHKSLPHDKFGTVSK 105
BLAST of mRNA_H-elongata_contig67462.14356.1 vs. uniprot
Match: A0A3G3BM34_SACJA (Vanadium-dependent bromine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM34_SACJA) HSP 1 Score: 134 bits (337), Expect = 1.140e-34 Identity = 63/91 (69.23%), Postives = 72/91 (79.12%), Query Frame = 1
Query: 1 PPCLGQLSNNDVADQQTQPLLSGSVCPVRDTLDFLDPKERAKVTFKRRVDIAKEELAVGPTCHLNNGDEDNIPDFAGQFHKTLPHDGLGQV 273
PPCLG D + TQPLLSGSVC VRD+LDFLDP RAKVT +R+ IAK+E +VGPTCH+NNGDE+N+P FAGQFHKTLPHD GQV
Sbjct: 52 PPCLGY----DEPAEPTQPLLSGSVCRVRDSLDFLDPVPRAKVTLLKRLAIAKDEFSVGPTCHINNGDEENVPLFAGQFHKTLPHDKFGQV 138
BLAST of mRNA_H-elongata_contig67462.14356.1 vs. uniprot
Match: Q7X9V0_9PHAE (Vanadium-dependent bromoperoxidase 2 n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7X9V0_9PHAE) HSP 1 Score: 129 bits (323), Expect = 9.720e-33 Identity = 59/90 (65.56%), Postives = 72/90 (80.00%), Query Frame = 1
Query: 4 PCLGQLSNNDVADQQTQPLLSGSVCPVRDTLDFLDPKERAKVTFKRRVDIAKEELAVGPTCHLNNGDEDNIPDFAGQFHKTLPHDGLGQV 273
PCLG + + TQPLLSG+VC VRD+LDFLDP RAKVT +R+ IAK+E++VGPTCH+NNGDE+N+P FAGQ+HKTLPHD GQV
Sbjct: 53 PCLGY----EEPPEPTQPLLSGNVCRVRDSLDFLDPVPRAKVTLLKRLAIAKDEISVGPTCHVNNGDEENVPLFAGQYHKTLPHDKFGQV 138
BLAST of mRNA_H-elongata_contig67462.14356.1 vs. uniprot
Match: B7ZGM1_9PHAE (Putative vanadium-dependent bromoperoxidase 3 n=4 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM1_9PHAE) HSP 1 Score: 121 bits (304), Expect = 3.570e-30 Identity = 55/91 (60.44%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 1 PPCLGQLSNNDVADQQTQPLLSGSVCPVRDTLDFLDPKERAKVTFKRRVDIAKEELAVGPTCHLNNGDEDNIPDFAGQFHKTLPHDGLGQV 273
PPC +++V + T PLLSGSVC VRD+LDFLDP +RA VT ++R+ IAK E VGPTCH+ NGDE+++P FAGQ+HK+LPHD GQV
Sbjct: 15 PPCFAAGDHDEV--RATLPLLSGSVCRVRDSLDFLDPVQRATVTLEKRLAIAKNEFGVGPTCHITNGDEEDVPLFAGQYHKSLPHDKFGQV 103
BLAST of mRNA_H-elongata_contig67462.14356.1 vs. uniprot
Match: A0A411NJW8_SACJA (Vanadium-dependent bromoperoxidase (Fragment) n=3 Tax=Saccharina japonica TaxID=88149 RepID=A0A411NJW8_SACJA) HSP 1 Score: 106 bits (264), Expect = 1.040e-24 Identity = 53/94 (56.38%), Postives = 65/94 (69.15%), Query Frame = 1
Query: 1 PPCLGQLSNNDVADQQTQPLLSGSVCPVRDTLDFLDPKERAKVTFKRRVDIAKEELAVGPTCHLNNGDEDNIPDF-AGQFHKTLPHDGLGQVRR 279
PPCLG +N+ Q + SG VC VRD+LDFLDP +RA+VT R+ IA++E VGPTCHL NGDEDN AGQ+HKTLPH+ GQV +
Sbjct: 56 PPCLGAGDSNET--QANKSPASGDVCNVRDSLDFLDPVQRAEVTRANRLAIAEDEFKVGPTCHLTNGDEDNETLLLAGQYHKTLPHNKYGQVNK 147
BLAST of mRNA_H-elongata_contig67462.14356.1 vs. uniprot
Match: PRXV_ASCNO (Vanadium-dependent bromoperoxidase n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=PRXV_ASCNO) HSP 1 Score: 55.8 bits (133), Expect = 5.410e-7 Identity = 30/63 (47.62%), Postives = 34/63 (53.97%), Query Frame = 1
Query: 88 DTLDFLDPKERAKVTFKRRVDIAKEEL-AVGPTCHLNNGDEDNIPDFAGQFHKTLPHDGLGQV 273
D D P ER F RV AK EL G C +NNG+ D A +FHK+LPHD LGQV
Sbjct: 8 DADDPTPPNERDDEAFASRVAAAKRELEGTGTVCQINNGET----DLAAKFHKSLPHDDLGQV 66
BLAST of mRNA_H-elongata_contig67462.14356.1 vs. uniprot
Match: UPI001359B6F0 (vanadium-dependent haloperoxidase n=1 Tax=Methylicorpusculum oleiharenae TaxID=1338687 RepID=UPI001359B6F0) HSP 1 Score: 54.7 bits (130), Expect = 1.370e-6 Identity = 25/62 (40.32%), Postives = 34/62 (54.84%), Query Frame = 1
Query: 88 DTLDFLDPKERAKVTFKRRVDIAKEELAVGPTCHLNNGDEDNIPDFAGQFHKTLPHDGLGQV 273
D LD L ER K+ ++ R A H NGDE +P+++GQFHK+LPH+ G V
Sbjct: 21 DELDPLPATERKKLAYEYREHRANMNFLNSSAPHPTNGDESAVPNYSGQFHKSLPHNNNGMV 82
BLAST of mRNA_H-elongata_contig67462.14356.1 vs. uniprot
Match: Q4LDE6_9PHAE (Vanadium-dependent iodoperoxidase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q4LDE6_9PHAE) HSP 1 Score: 52.4 bits (124), Expect = 9.060e-6 Identity = 34/88 (38.64%), Postives = 44/88 (50.00%), Query Frame = 1
Query: 31 DVADQQTQPLLSGSVCPVRDTL--DFLD----PKERAKVTFKRRVDIAKEELAVGP-TCHLNNGDEDNIPDFAGQFHKTLPHDGLGQV 273
D A ++ L GS+ + D LD P ERA +R++ A+ E T HLNNGD + A FHK+LPHD LGQV
Sbjct: 42 DTAASPSKDTLKGSLSRKLQVVNDDALDVSGTPAERAANALNQRIEFAETEFTASEGTLHLNNGDRSS----AATFHKSLPHDSLGQV 125
BLAST of mRNA_H-elongata_contig67462.14356.1 vs. uniprot
Match: O82433_FUCDI (Vanadium bromoperoxidase n=1 Tax=Fucus distichus TaxID=3012 RepID=O82433_FUCDI) HSP 1 Score: 52.4 bits (124), Expect = 9.110e-6 Identity = 28/63 (44.44%), Postives = 32/63 (50.79%), Query Frame = 1
Query: 88 DTLDFLDPKERAKVTFKRRVDIAKEEL-AVGPTCHLNNGDEDNIPDFAGQFHKTLPHDGLGQV 273
D LD P R V F R D A+ E G C + NG+ D A FHK+LPHD LGQV
Sbjct: 131 DALDPTAPNRRDNVAFASRRDAARRERDGTGTVCQITNGET----DLATMFHKSLPHDELGQV 189 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67462.14356.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig67462.14356.1 >prot_H-elongata_contig67462.14356.1 ID=prot_H-elongata_contig67462.14356.1|Name=mRNA_H-elongata_contig67462.14356.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=94bp PPCLGQLSNNDVADQQTQPLLSGSVCPVRDTLDFLDPKERAKVTFKRRVDback to top mRNA from alignment at H-elongata_contig67462:857..2073+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig67462.14356.1 ID=mRNA_H-elongata_contig67462.14356.1|Name=mRNA_H-elongata_contig67462.14356.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1217bp|location=Sequence derived from alignment at H-elongata_contig67462:857..2073+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig67462:857..2073+ >mRNA_H-elongata_contig67462.14356.1 ID=mRNA_H-elongata_contig67462.14356.1|Name=mRNA_H-elongata_contig67462.14356.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=564bp|location=Sequence derived from alignment at H-elongata_contig67462:857..2073+ (Himanthalia elongata Himel1 dioecious)back to top |