mRNA_H-elongata_contig67453.14354.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: A0A6N2M2F6_SALVM (Uncharacterized protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2M2F6_SALVM) HSP 1 Score: 58.9 bits (141), Expect = 2.370e-8 Identity = 26/75 (34.67%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 1 MSPADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDKDL 225
++P WW +G + P++ K AIR S+ ++ G E NWS++ + + R+ +R LVFVR NL++Q ++L
Sbjct: 533 LNPVSWWEQFGNV-TPELQKFAIRVLSQCCSATGCERNWSVFEHIHSKKRNRLEHKRLNDLVFVRYNLKIQQRNL 606
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: A0A6A5M7K7_LUPAL (Phosphopyruvate hydratase n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5M7K7_LUPAL) HSP 1 Score: 58.5 bits (140), Expect = 3.250e-8 Identity = 27/71 (38.03%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 7 PADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDK 219
P WW TYG P++ K+A+R S+ +++G E NWS++ + + R+ ++ LVFVR NLRLQ +
Sbjct: 676 PDQWWETYG-CRTPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLEHQKLNDLVFVRYNLRLQQR 745
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: UPI001035AC53 (uncharacterized protein LOC114271314 n=2 Tax=Camellia sinensis TaxID=4442 RepID=UPI001035AC53) HSP 1 Score: 58.2 bits (139), Expect = 4.420e-8 Identity = 28/76 (36.84%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 1 MSPADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDKDLP 228
M P WWV +G P + +A+R + +S+ +E NWS+Y + R +++P RA+ LVFV +NLRL + P
Sbjct: 560 MDPHSWWVVHGA-SAPTLQSLALRLFVQPSSSSCAERNWSIYSFIHSMRRNKMTPRRAKDLVFVHSNLRLLSRRTP 634
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: A0A6A5MXA4_LUPAL (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5MXA4_LUPAL) HSP 1 Score: 56.6 bits (135), Expect = 4.850e-8 Identity = 26/68 (38.24%), Postives = 42/68 (61.76%), Query Frame = 1
Query: 16 WWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDK 219
WW TYG P++ K+A+R S+ +++G E NWS++ + + R+ ++ LVFVR NLRLQ +
Sbjct: 5 WWETYG-CRTPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLEHQKLNDLVFVRYNLRLQQR 71
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: A0A2K3K1Y4_TRIPR (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3K1Y4_TRIPR) HSP 1 Score: 55.5 bits (132), Expect = 6.020e-8 Identity = 27/72 (37.50%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 16 WWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDKDLPK 231
WW YG P++ K+AIR S+ +++G E NWS++ + + R+ ++ LVFVR NLRLQ+++ K
Sbjct: 3 WWEMYGTEA-PNLKKLAIRILSQTCSASGCERNWSVFEHIHSKKRNRLEHQKLNDLVFVRYNLRLQNRNQKK 73
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: UPI00092F4EA0 (uncharacterized protein LOC109333975 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092F4EA0) HSP 1 Score: 57.0 bits (136), Expect = 1.090e-7 Identity = 26/69 (37.68%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 16 WWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDKD 222
WW TYG P++ K+A+R S+ +++G E NWS++ + + R+ ++ LVFVR NLRLQ ++
Sbjct: 249 WWETYG-CRAPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLEHQKLNDLVFVRYNLRLQQRN 316
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: UPI000E701CD2 (uncharacterized protein LOC113288024 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E701CD2) HSP 1 Score: 57.0 bits (136), Expect = 1.110e-7 Identity = 28/71 (39.44%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 7 PADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDK 219
PA WW +YG P++ +VA+R S ++ G E NWS + V R R+S +R LV+V+ NLRL ++
Sbjct: 282 PALWWNSYG-YSAPELQRVAVRVLSSTCSATGCERNWSEFEQVHTKRRNRLSQQRLNALVYVKYNLRLNER 351
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: A0A6A5N2L1_LUPAL (BED-type domain-containing protein n=2 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5N2L1_LUPAL) HSP 1 Score: 56.6 bits (135), Expect = 1.530e-7 Identity = 26/71 (36.62%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 7 PADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDK 219
P WW TY + P++ K+A+R S+ +++G E NWS++ + + R+ ++ LVFVR NLRLQ +
Sbjct: 435 PDQWWETY-RCCTPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLENQKLNDLVFVRYNLRLQQR 504
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: A0A6N2KDR5_SALVM (Uncharacterized protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2KDR5_SALVM) HSP 1 Score: 56.2 bits (134), Expect = 2.110e-7 Identity = 28/77 (36.36%), Postives = 44/77 (57.14%), Query Frame = 1
Query: 1 MSPADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDKDLPK 231
++P WW +G ++ K AIR S+ ++ G E NWS++ + R R+ +R LVFVR NLR+Q ++L K
Sbjct: 527 LNPVAWWEQFGN-DTQELQKFAIRVLSQCCSATGCERNWSVFEFIHSKRRNRLEHKRLNDLVFVRYNLRIQQRNLSK 602
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Match: A0A2Z6NFM0_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NFM0_TRISU) HSP 1 Score: 55.1 bits (131), Expect = 5.360e-7 Identity = 27/75 (36.00%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 7 PADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHARISPERARKLVFVRANLRLQDKDLPK 231
P WW YG P++ K+AI S+ +++G E NWS++ + + R+ ++ LVFVR NLRLQ+++ K
Sbjct: 510 PDQWWEMYGTEA-PNLKKLAIWILSQTCSASGCERNWSVFEHIQSKKRNRLEHQKLNDLVFVRYNLRLQNRNKKK 583 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67453.14354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig67453.14354.1 >prot_H-elongata_contig67453.14354.1 ID=prot_H-elongata_contig67453.14354.1|Name=mRNA_H-elongata_contig67453.14354.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp MSPADWWVTYGKIGLPDVTKVAIRTTSKVPASAGSESNWSLYGDVMGGRHback to top mRNA from alignment at H-elongata_contig67453:2565..2795- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig67453.14354.1 ID=mRNA_H-elongata_contig67453.14354.1|Name=mRNA_H-elongata_contig67453.14354.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=231bp|location=Sequence derived from alignment at H-elongata_contig67453:2565..2795- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig67453:2565..2795- >mRNA_H-elongata_contig67453.14354.1 ID=mRNA_H-elongata_contig67453.14354.1|Name=mRNA_H-elongata_contig67453.14354.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=462bp|location=Sequence derived from alignment at H-elongata_contig67453:2565..2795- (Himanthalia elongata Himel1 dioecious)back to top |