prot_H-elongata_contig6745.14352.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6745.14352.1
Unique Nameprot_H-elongata_contig6745.14352.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length123
Homology
BLAST of mRNA_H-elongata_contig6745.14352.1 vs. uniprot
Match: D7FQM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM1_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 7.260e-42
Identity = 70/122 (57.38%), Postives = 91/122 (74.59%), Query Frame = 0
Query:    1 MTFALCASADKECLEVAIKANMRRFAALYQDENRIVIIHTDEISTNRRARYNQGTDEIWGLCEQHSPAKSTKFGGVDNLEYISVKLKKGEWHIGAEYTVISASTLGERPYHAIPLVAFDSCK 122
            M FALCASAD ECL  AI AN+ RF +LY+ E R++I+  DE++T +RARY+Q  D I GLC Q +P K+TKFGGV ++E I+  L KGE HIG ++TVIS + LG+RPYHA+PL+AF  C 
Sbjct:   33 MKFALCASADVECLTAAITANLERFVSLYKGEKRVIILQMDELATEQRARYDQEGDNIVGLCVQCTPRKNTKFGGVSSVEEIAGMLDKGECHIGHQHTVISGAALGDRPYHAVPLLAFAVCN 154          
BLAST of mRNA_H-elongata_contig6745.14352.1 vs. uniprot
Match: D7G6P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6P9_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 7.820e-40
Identity = 72/122 (59.02%), Postives = 90/122 (73.77%), Query Frame = 0
Query:    1 MTFALCASADKECLEVAIKANMRRFAALYQDENRIVIIHTDEISTNRRARYNQGTDEIWGLCEQHSPAKSTKFGGVDNLEYISVKLKKGEWHIGAEYTVISASTLGERPYHAIPLVAFDSCK 122
            M F +CAS +K+CL  AI AN+ RF+ LY  E R+VI+  DEI+T  RARY   TDEI GLC QH+P KSTKF  +DNLE +S +L +G  HIG+E+TVISA  LG+ P+HAIP+VAF SCK
Sbjct:   33 MKFVVCASLEKDCLVAAITANLERFSRLYDGERRVVILEIDEIATEPRARYYGLTDEILGLCVQHTPPKSTKFD-LDNLEDLSGRLNEGHSHIGSEHTVISACALGDTPHHAIPVVAFASCK 153          
BLAST of mRNA_H-elongata_contig6745.14352.1 vs. uniprot
Match: UPI0004622351 (uncharacterized protein n=1 Tax=Trametes versicolor (strain FP-101664) TaxID=717944 RepID=UPI0004622351)

HSP 1 Score: 56.6 bits (135), Expect = 8.260e-7
Identity = 27/84 (32.14%), Postives = 47/84 (55.95%), Query Frame = 0
Query:   41 DEISTNRRARYNQGTDEIWGLCEQHSPAKSTKFGGVDNLEYISVKLKKG--EWHIGAEYTVISASTLGERPYHAIPLVAFDSCK 122
            D I+  +RA Y++ T+E+ GLC +HS A       +D +++++  L       H+G E TV + +    + YHA+P++   SCK
Sbjct:   45 DGIAVEQRASYSRVTNEVVGLCREHSGALDLHVISLDAIKHVAAALNDEVPTCHLGKECTVAALAPYRAKNYHAVPILVSPSCK 128          
BLAST of mRNA_H-elongata_contig6745.14352.1 vs. uniprot
Match: A0A8H6WSH7_9AGAR (Uncharacterized protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6WSH7_9AGAR)

HSP 1 Score: 50.8 bits (120), Expect = 8.750e-5
Identity = 29/91 (31.87%), Postives = 44/91 (48.35%), Query Frame = 0
Query:   34 RIVIIHTDEISTNRRARYNQGTDEIWGLCEQHSPAKSTKFGGVDNLEYISVKLKKGEWHIGAEYTVISASTLGE--RPYHAIPLVAFDSCK 122
            R  ++  DEIST RR R++  T+   G+C +H+   S +F    +LE +       E H   E TV +   L +  R Y A P++    CK
Sbjct:  547 RHAVLMFDEISTERRVRWDSKTNNFLGVCREHAHKISLQFNSEQDLEELFRCKDADEVHFAGEATVAAIGVLDDHTRLYAARPILISGDCK 637          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6745.14352.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FQM1_ECTSI7.260e-4257.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G6P9_ECTSI7.820e-4059.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI00046223518.260e-732.14uncharacterized protein n=1 Tax=Trametes versicolo... [more]
A0A8H6WSH7_9AGAR8.750e-531.87Uncharacterized protein n=1 Tax=Mycena sanguinolen... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6745contigH-elongata_contig6745:1277..1645 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6745.14352.1mRNA_H-elongata_contig6745.14352.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6745 1045..1645 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6745.14352.1 ID=prot_H-elongata_contig6745.14352.1|Name=mRNA_H-elongata_contig6745.14352.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp
MTFALCASADKECLEVAIKANMRRFAALYQDENRIVIIHTDEISTNRRAR
YNQGTDEIWGLCEQHSPAKSTKFGGVDNLEYISVKLKKGEWHIGAEYTVI
SASTLGERPYHAIPLVAFDSCK*
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