mRNA_H-elongata_contig11860.1434.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11860.1434.1 vs. uniprot
Match: D7G8K1_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K1_ECTSI) HSP 1 Score: 167 bits (423), Expect = 4.470e-46 Identity = 86/124 (69.35%), Postives = 94/124 (75.81%), Query Frame = 1
Query: 1 NYNCRYDFDVESNGVFRLFPSGANRYPTGTEVLNSYGRRANDNLLLEYGFAMLDNPWDAAEIACCLLPGET---LFERRKARLRASGQRTFRIIRVRRGQWSLDLLRFNRCACLTASELNDLEA 363
N +YDFDV NG FRLFPSG NRYP +EVLNSYGRRANDNLLL+YGFAMLDN WDAAE+ C L P L RRKA LRASGQ T RI+RVRR W +LLRF RCACLTA EL++LEA
Sbjct: 217 NVQTKYDFDVGGNGTFRLFPSGNNRYPRNSEVLNSYGRRANDNLLLDYGFAMLDNEWDAAEVICSLPPSHDQSPLDRRRKACLRASGQHTVRILRVRRDVWPEELLRFCRCACLTAPELDNLEA 340
BLAST of mRNA_H-elongata_contig11860.1434.1 vs. uniprot
Match: A0A6H5JC99_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC99_9PHAE) HSP 1 Score: 162 bits (410), Expect = 3.530e-44 Identity = 83/124 (66.94%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 1 NYNCRYDFDVESNGVFRLFPSGANRYPTGTEVLNSYGRRANDNLLLEYGFAMLDNPWDAAEIACCLLPGE---TLFERRKARLRASGQRTFRIIRVRRGQWSLDLLRFNRCACLTASELNDLEA 363
N +YDFDVE NG FRLFPSG NRYP +EVLNSYGRRANDNLLL+YGFAMLDN WD AE+ C L P L RRKA L ASGQ T R++RV R W +LLRF RCACLTA EL++LEA
Sbjct: 245 NVQTKYDFDVERNGTFRLFPSGNNRYPRNSEVLNSYGRRANDNLLLDYGFAMLDNEWDTAEVTCFLPPSHGQSPLDRRRKACLLASGQHTVRMLRVHRDVWPEELLRFCRCACLTAPELDNLEA 368
BLAST of mRNA_H-elongata_contig11860.1434.1 vs. uniprot
Match: A0A7S3Y0Q1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0Q1_HETAK) HSP 1 Score: 107 bits (268), Expect = 2.180e-25 Identity = 52/119 (43.70%), Postives = 74/119 (62.18%), Query Frame = 1
Query: 1 NYNCRYDFDVESNGVFRLFPSGANRYPTGTEVLNSYGRRANDNLLLEYGFAMLDNPWDAAEIACCLLPGETLFERRKARLRASGQRTFRIIRVRRGQWSLDLLRFNRCACLTASELNDL 357
N +YD+DV+ NG+FRLFPS +N YP G+EV NSYGRR N+NLL+EYGFA+ N WD+ I L + + +++ L G + R + Q+S + L F R CL+ +EL +L
Sbjct: 22 NVATKYDYDVDGNGLFRLFPSNSNNYPAGSEVFNSYGRRTNENLLMEYGFALPKNEWDSVHIPIKLELDDPNYAAKRSLLLRFGTPSSRTFHIETSQFSFEALMFCRLVCLSDTELQNL 140
BLAST of mRNA_H-elongata_contig11860.1434.1 vs. uniprot
Match: A0A7S2WBA3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBA3_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 2.880e-19 Identity = 50/107 (46.73%), Postives = 62/107 (57.94%), Query Frame = 1
Query: 1 NYNCRYDFDVESNGVFRLFPSGANRYPTGTEVLNSYGRRANDNLLLEYGFAMLDNPWDAAEIACCLLPGETLFERRKARLRASGQRTFRIIRVRRGQWSLDLLRFNR 321
N +YDFD E + FRLFPS N+Y G EV NSYGRR NDNLLLEYGFAML N WD + + L+ RR+ L +G R ++R + DLL + R
Sbjct: 281 NVPTKYDFDSEESHTFRLFPSSQNKYRAGEEVFNSYGRRPNDNLLLEYGFAMLGNEWDHMPVHAPHHKEDQLWPRRRKALARNGVTVVRPFQLRDQELCRDLLVYCR 387
BLAST of mRNA_H-elongata_contig11860.1434.1 vs. uniprot
Match: K3X8I1_GLOUD (SET domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8I1_GLOUD) HSP 1 Score: 89.0 bits (219), Expect = 1.070e-18 Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1
Query: 1 NYNCRYDFDVESNGVFRLFPSGANRYPTGTEVLNSYGRRANDNLLLEYGFAMLDNPWDAAEI 186
N +YDF+V++NG+FRLFPS N Y GTEV NSYGRR+N LLL+YGFA+L+N WD +I
Sbjct: 194 NVATKYDFNVDNNGMFRLFPSSTNTYAAGTEVFNSYGRRSNFQLLLDYGFALLENEWDYVDI 255
BLAST of mRNA_H-elongata_contig11860.1434.1 vs. uniprot
Match: A0A2D4CAI0_PYTIN (SET domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAI0_PYTIN) HSP 1 Score: 84.0 bits (206), Expect = 1.540e-17 Identity = 36/58 (62.07%), Postives = 42/58 (72.41%), Query Frame = 1
Query: 1 NYNCRYDFDVESNGVFRLFPSGANRYPTGTEVLNSYGRRANDNLLLEYGFAMLDNPWD 174
N +YDFDV+ NG+FRL+PS N Y G EV NSYGRR N LLL+YGFA+ DN WD
Sbjct: 148 NVATKYDFDVDGNGMFRLYPSAGNAYAQGMEVFNSYGRRPNFQLLLDYGFALTDNEWD 205
BLAST of mRNA_H-elongata_contig11860.1434.1 vs. uniprot
Match: A0A3F2RHI4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RHI4_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 2.660e-17 Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 1 NYNCRYDFDVESNGVFRLFPSGANRYPTGTEVLNSYGRRANDNLLLEYGFAMLDNPWDAAEI 186
N +YDFDV+ NG+FRL+PSGA Y G E NSYGRR+N LLL+YGFA+ DN WD +I
Sbjct: 176 NVATKYDFDVDGNGMFRLYPSGATSYVAGAEAFNSYGRRSNFQLLLDYGFALPDNEWDYVDI 237
BLAST of mRNA_H-elongata_contig11860.1434.1 vs. uniprot
Match: A0A8K1FF70_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF70_PYTOL) HSP 1 Score: 85.9 bits (211), Expect = 2.940e-17 Identity = 40/71 (56.34%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 1 NYNCRYDFDVESNGVFRLFPSGANRYPTGTEVLNSYGRRANDNLLLEYGFAMLDNPWDAAEIACCLLPGET 213
N +YDFDV+ NG FRLFPS +N Y G EV NSYGRR N LLL+YGFA+ DN W+ E++ LP +T
Sbjct: 203 NVATKYDFDVDGNGSFRLFPSASNSYAKGAEVFNSYGRRPNFQLLLDYGFALEDNEWEYVEVS---LPRDT 270
BLAST of mRNA_H-elongata_contig11860.1434.1 vs. uniprot
Match: A0A5D6XWK1_9STRA (SET domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWK1_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 3.230e-17 Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 1 NYNCRYDFDVESNGVFRLFPSGANRYPTGTEVLNSYGRRANDNLLLEYGFAMLDNPWDAAEI 186
N +YDFDV NG+FRLFPS A Y G EV NSYGRR+N +LLL+YGFA+ DN WD +I
Sbjct: 204 NVATKYDFDVARNGMFRLFPSAATAYAAGAEVFNSYGRRSNFHLLLDYGFALRDNEWDYVDI 265
BLAST of mRNA_H-elongata_contig11860.1434.1 vs. uniprot
Match: A0A2R5GWH5_9STRA (Histone-lysine N-methyltransferase setd3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWH5_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 5.130e-17 Identity = 48/108 (44.44%), Postives = 63/108 (58.33%), Query Frame = 1
Query: 40 GVFRLFPSGANRYPTGTEVLNSYGRRANDNLLLEYGFAMLDNPWDAAEIACCLLPGETLFERRKARLRASGQRTFRIIRVRRGQWSLDLLRFNRCACLTASELNDLEA 363
G F+LFP+G NRY G E NSYGRR+N LLLEYGF + +N WD+ ++ L P +E + A LR G F+ R+ RG+ DLL F R + L A + L A
Sbjct: 319 GKFQLFPTGKNRYAKGEEAFNSYGRRSNSFLLLEYGFCLENNEWDSYKLTVRLDPEVVEYEAKCALLRDLGLTRFKSFRLERGKLQEDLLAFMRLSVLDAGGVRALLA 426 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11860.1434.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11860.1434.1 >prot_H-elongata_contig11860.1434.1 ID=prot_H-elongata_contig11860.1434.1|Name=mRNA_H-elongata_contig11860.1434.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp NYNCRYDFDVESNGVFRLFPSGANRYPTGTEVLNSYGRRANDNLLLEYGFback to top mRNA from alignment at H-elongata_contig11860:644..1285+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11860.1434.1 ID=mRNA_H-elongata_contig11860.1434.1|Name=mRNA_H-elongata_contig11860.1434.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=642bp|location=Sequence derived from alignment at H-elongata_contig11860:644..1285+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11860:644..1285+ >mRNA_H-elongata_contig11860.1434.1 ID=mRNA_H-elongata_contig11860.1434.1|Name=mRNA_H-elongata_contig11860.1434.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=726bp|location=Sequence derived from alignment at H-elongata_contig11860:644..1285+ (Himanthalia elongata Himel1 dioecious)back to top |