|
|
Homology
BLAST of mRNA_H-elongata_contig6730.14339.1 vs. uniprot
Match: D7G2E4_ECTSI (Cytochrome P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E4_ECTSI) HSP 1 Score: 279 bits (713), Expect = 4.400e-87 Identity = 141/329 (42.86%), Postives = 213/329 (64.74%), Query Frame = 2
Query: 89 LQDSLRLIPEVANGLFSIDRKFWWPLNKIFPFSFGPAMKSRKKFDTMIAGVIQERRSALLMGDSGVRNVGVLDTMLEMQAKQRAAGGPRDGEIEYDDEFICDNICTAMFAGFDTSSATLARILQFLVSNESKELDLKKQLLEELSGSVAVEEHYVEEEPTNGSSNARGSPEKGVFHSFPLLDAVVLESNRMSPAVGGVIRKAMKTMEFNGFLIPEGESISWSLINGYVSDSFYPQHTKFCPYRFLQGGKIGSIPSNGAMSPAEAHGNQPRPQMFGYGKHMCPGKELAKLEILLFLKFFLPKYGYRLVEGQNLGGFMARNAPKDGLRLVL 1075
++D+ RL+P + GLFS +F PLNK+ F+FG +M +R+++ ++ +IQ RR+ + G + G+LD+ E+Q + + +G +DD+FI DN+ T +FAG DT+S TL R+LQ L + E + ++ QL++ELS + V++ E+ A G P G+F SFPLL+AVVLE+NR+ P+VG V R K + +NG+LIPEGE+ISW+L G ++++ YP+ KFCP+RFL GG+ S + QP P M+G+GKHMCPG+ELAKLE++LF+K FLPK+ + +VEGQ+ G + N PKD LR++L
Sbjct: 1 MEDTKRLLPALLTGLFSFPYRFPPPLNKLPTFAFGSSMDARQEYKDVVRDLIQRRRADVAAGMGASNSGGILDSFFELQKQYQMDA--EEGSFSFDDDFIIDNVITILFAGKDTTSVTLTRMLQLLGTAEDGK-EIMDQLIDELSKAATVDDGERED------GTAAGLPGAGLFTSFPLLNAVVLEANRLHPSVGAVFRTTRKDISYNGYLIPEGETISWNLNQGSLAETLYPEPRKFCPFRFLHGGEKKDTDSAASPGAGARSTGQPIPPMWGFGKHMCPGRELAKLEMVLFMKTFLPKFDFEVVEGQSFSGSLPANGPKDKLRVIL 320
BLAST of mRNA_H-elongata_contig6730.14339.1 vs. uniprot
Match: D7G2E2_ECTSI (Cytochrome P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E2_ECTSI) HSP 1 Score: 278 bits (711), Expect = 7.420e-84 Identity = 155/369 (42.01%), Postives = 223/369 (60.43%), Query Frame = 2
Query: 2 EVRMFDEIASFTMEVIVYAFLGDYGTEKVLQDSLRLIPEVANGLFSIDRKFWWPLNKIFPFSFGPAMKSRKKFDTMIAGVIQERRSALLMGDSGVRNVGVLDTMLEMQAKQR-AAGGPRDGEIEYDDEFICDNICTAMFAGFDTSSATLARILQFLVSNESKELDLKKQLLEEL-----SGSVAVEEHYVEEEPTNGSSNARGSPEKGVFHSFPLLDAVVLESNRMSPAVGGVIRKAMKTMEFNGFLIPEGESISWSLINGYVSDSFYPQHTKFCPYRFLQGGK-----IGSIPSNGAMSPAEAHGNQPRPQMFGYGKHMCPGKELAKLEILLFLKFFLPKYGYRLVEGQNLGGFMARNAPKDGLRLVL 1075
E+ M D++ F++E I AF GDY T + +QD+ RL+P ++ GL SI +F PLNK+ FG +M +R++ +I + RR L G+ +N GVLD+ ++Q +Q+ A G DG +DD+FI DN A+F G DT+S TL RILQ L + E + ++ QL++EL SG +A+E A GS G S PL A+VLES R+ PA+ G+ RKA K +NG+LIPEG++I+W+LI+G ++ YP+ KFCP+RFL G + + P GA SP QP P M+G+GKHMCPG++LAKLE++LF+K FLPK+ + +VEGQ+ + PKD LR+ L
Sbjct: 196 ELTMQDDLRRFSLESIAGAFFGDYATPRFIQDTGRLLPILSQGLISIPFRFPPPLNKLPMLGFGLSMDAREELKGVIRDALHRRRVDLASGEGTSKNPGVLDSFFDLQDQQQMGAEGALDGSFSFDDDFIIDNGVVALFGGIDTTSVTLTRILQLLGTAEDGK-EVMDQLIDELNNDATSGDIALE------------GGAAGSV--GTLESLPLFKALVLESTRLYPAIAGLSRKARKDFSYNGYLIPEGQTINWNLIHGSRAEKLYPEPEKFCPFRFLHGDEKKDTDSAASPGTGARSPG-----QPIPPMWGFGKHMCPGRDLAKLEMVLFMKTFLPKFDFEVVEGQSFKSTLPTGGPKDKLRITL 544
BLAST of mRNA_H-elongata_contig6730.14339.1 vs. uniprot
Match: A0A6H5KBE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBE2_9PHAE) HSP 1 Score: 259 bits (661), Expect = 8.600e-78 Identity = 146/383 (38.12%), Postives = 213/383 (55.61%), Query Frame = 2
Query: 2 EVRMFDEIASFTMEVIVYAFLGDYGTEKVLQDSLRLIPEVANGLFSIDRKFWWPLNKIFPFSFGPAMKSRKKFDTMIAGVIQERRSALLMGDSGVRNVGVLDTMLEMQAKQRAAGGPRDGEIEYDDEFICDNI--------------------------------------------CTAMFAGFDTSSATLARILQFLVSNESKELDLKKQLLEELSGSVAVEEHYVEEEPTNGSSNARGSPEKGVFHSFPLLDAVVLESNRMSPAVGGVIRKAMKTMEFNGFLIPEGESISWSLINGYVSDSFYPQHTKFCPYRFLQGGKIGSIPSNGAMSPAEAHGNQPRPQMFGYGKHMCPGKELAKLEILLFLKFFLPKYGYRLVEGQ 1018
EV + D+I FT+E I G+Y T +QD+ RL+P + GLFS KF PLNK+ PF+FG +M +R+++ ++ +IQ RR+ + G + G+LD E++ + + +G +DD+FI DN+ T +FAG DT+SATL R+LQ L + E + ++ QL +ELS + V+ EE A G P + SFPLL+AVVLE+NR+ PAVG V R K + +NG+LIPEGE+ISW+L G ++++ YP+ +FCP+RFL GG+ S + QP P M+G+GKHMCPG+ELAKLE++LF+K FLPK+ + +VEGQ
Sbjct: 63 EVEIQDDITDFTLESIAAGLFGEYATPNFMQDTKRLLPALLTGLFSFPYKFPPPLNKLPPFAFGSSMDARQEYKGVVRELIQRRRADVAAGMGASNSGGILDLFFELEKQYQMDA--EEGSFFFDDDFIIDNVRAATNLSITGTSSLSLRTVLSERSRALNQCFMEFSHRFHRRPRVITILFAGKDTTSATLTRMLQLLGTAEDGK-EIMDQLTDELSEAATVDNGDCEE------FTAAGLPGAVLITSFPLLNAVVLEANRLHPAVGSVFRTTRKDISYNGYLIPEGETISWNLTQGSLAETLYPEPRQFCPFRFLHGGEKKDTDSAASPGTGARRSGQPIPPMWGFGKHMCPGRELAKLEMILFMKTFLPKFDFEVVEGQ 436
BLAST of mRNA_H-elongata_contig6730.14339.1 vs. uniprot
Match: A0A6H5JJ64_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ64_9PHAE) HSP 1 Score: 216 bits (551), Expect = 7.290e-58 Identity = 124/345 (35.94%), Postives = 197/345 (57.10%), Query Frame = 2
Query: 2 EVRMFDEIASFTMEVIVYAFLGDYGTEKVLQDSLRLIPEVANGLFSIDRKFWWPLNKIFPFSFGPAMKSRKKFDTMIAGVIQERRSALLMGDSGVRNVGVLDTMLEMQAKQR-AAGGPRDGEIEYDDEFICDNICTAMFAGFDTSSATLARILQFLVSNESKELDLKKQLLEEL-----SGSVAVEEHYVEEEPTNGSSNARGSPEKGVFHSFPLLDAVVLESNRMSPAVGGVIRKAMKTMEFNGFLIPEGESISWSLINGYVSDSFYPQHTKFCPYRFLQGGKIGSIPSNGAMSPAEAHGNQPRPQMFGYGKHMCPGKELAKLEILLFLKFFLPKYGYRLVEGQ 1018
E+ M +++ F++E I AF GDY T + ++D+ RL+P + GL SI +F PLN++ FG +M +R++ +I + RR L +N V+D+ +++Q +Q+ A G DG +DD+FI DN A+F G DT+S TL R+LQ L + E + ++ QL++EL SG++A+E G++ G+ LES + A+ G K +NG+LIPEG++ +W+LI+G ++ YP+ KFCP+RFL GG+ + + QP P M+G+GKHMCPG++LAK+EI+LF+K F+PK+ + +VEGQ
Sbjct: 195 ELTMQNDLRRFSLESIAGAFFGDYATPRFVEDTGRLLPILRQGLVSIPFRFSPPLNRLPMLGFGLSMHAREELKGLIRDALHRRRVDLASEQGTNKNPCVVDSFVDLQGQQQIGAEGALDGSFSFDDDFIIDNGLVALFGGIDTTSVTLTRMLQLLGTAEDGK-EVMDQLIDELNNDATSGNIALE---------GGAAGLAGT----------------LESLSLLKALAG------KDFSYNGYLIPEGQTFNWNLIHGSRAEKLYPEPQKFCPFRFLHGGEKKDTDNAASPGTGARSSGQPIPPMWGFGKHMCPGRDLAKVEIVLFMKTFMPKFDFEIVEGQ 507
BLAST of mRNA_H-elongata_contig6730.14339.1 vs. uniprot
Match: A0A0G4EEK5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EEK5_VITBC) HSP 1 Score: 103 bits (257), Expect = 4.580e-20 Identity = 97/375 (25.87%), Postives = 159/375 (42.40%), Query Frame = 2
Query: 2 EVRMFDEIASFTMEVIVYAFLGDYGTEKVLQDSLRLIPEV----ANGLFSIDRKFWWPLNKIFPFS-FGPAMKSRKKFDTMIAGVIQERRSALLMGDSGVRNVGVLDTMLEMQAKQ-------RAAGGPRDGEI-EYDDEFICDNICTAMFAGFDTSSATLARILQFLVSNESKELDLKKQLLEELSGSVAVEEHYVEEEPTNGSSNARGSPEKGVFHSFPLLDAVVLESNRMSPAVGGVIRKAMKTMEFNGFLIPEGESISWSLINGYVSDSFYPQHTKFCPYRFLQGGKIGSIPSNGAMSPAEAHGNQPRPQMFGYGKHMCPGKELAKLEILLFLKFFLPKYGYRLVEGQNLGGFMARN---APKDGLRLVLT 1078
E R D + + + A+ G + D L+ + E GL + K W + PF+ + A++++ A V+ +R A+ + V+D +L + +A +D ++ + D+ I DN+ +FAG DTSS+TL +L L SN DL+K+L + G + PE P LDAV+ E+ R P V + R A + +E G+L+P+G + ++L S + + F PYR LQG + +G P P FG GK +CPG ELA+LE+ + L F+ + + ++ +L N A K G + LT
Sbjct: 167 EGRQLDLSSDMKLYTLEVAWKVLCGQASISDDKLQQLSESFMAWVKGLAAPWTKGW-----VAPFNIYDKALEAKDDIMQFAASVVDAKR-AMSPAERAASRKDVVDYLLSARMTSDGEVVDAESADAGKDADVFQMSDQAIADNVLLTLFAGHDTSSSTLGVMLVALASNPQVLKDLRKELDDAAQGRSRIP-----------------WPE---LRKLPFLDAVITETLRWEPIVVQLSRMAEEDLEIGGYLVPKGWQVDYNLFATNQDGSVFSDPSFFDPYRHLQG---------------QINGGSPVP--FGGGKRVCPGAELARLEMKMLLDRFVREVEFEAIDASSLELSRFPNPFPASKGGFKARLT 498
BLAST of mRNA_H-elongata_contig6730.14339.1 vs. uniprot
Match: G9JVP7_9ASPA (ABA 8'-hydroxylase 2 (Fragment) n=1 Tax=Gladiolus hybrid cultivar TaxID=263601 RepID=G9JVP7_9ASPA) HSP 1 Score: 102 bits (255), Expect = 4.750e-20 Identity = 80/296 (27.03%), Postives = 135/296 (45.61%), Query Frame = 2
Query: 197 AMKSRKKFDTMIAGVIQERRSALLMGDSGVRNVGVLDTMLEMQAKQRAAGGPRDGEIEYDDEFICDNICTAMFAGFDTSSATLARILQFLVSNESKELDLKKQLLEELSGSVAVEEHYVEEEPTNGSSNARGSPEKGVFHSFPLLDAVVLESNRMSPAVGGVIRKAMKTMEFNGFLIPEGESISWSLINGYVSDSFYPQHTKFCPYRFLQGGKIGSIPSNGAMSPAEAHGNQPRPQMF---GYGKHMCPGKELAKLEILLFLKFFLPKYGYRLVEGQNLGGFMARNAPKDGLRLVL 1075
A+++RK+ T+++ ++ ERR ++G L +++ + ++ A + D+ I DNI +FA DT+++ L ++++L N L G+V E+ + + TNG N + + S L +LES RM+ + R+A+ +E+ G+LIP+G + L N + + F+ KF P RF+ P+P F G G H CPG ELAKLEIL+F+ + KYG+ ++ N + PK GL L
Sbjct: 174 ALQARKQLGTILSAIMGERRKNRVLGKD------FLGCLMDSKDEKGA---------QLSDDQISDNIIGVLFAAQDTTASVLTWMVKYLYDNPK------------LLGAVKEEQMAIYK--TNGCGNKPLTWAQ--TRSMTLTHKFILESLRMASIISFTFREAVADVEYKGYLIPKGWKVMPLLRNIHHNPEFFQDPQKFDPSRFMAS---------------------PKPNFFLPFGNGVHACPGNELAKLEILIFIHHLVTKYGFEVIGSNNETEYSPFPVPKHGLLAKL 417
BLAST of mRNA_H-elongata_contig6730.14339.1 vs. uniprot
Match: D8SAZ8_SELML (Uncharacterized protein CYP716M1 n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SAZ8_SELML) HSP 1 Score: 102 bits (255), Expect = 5.420e-20 Identity = 93/340 (27.35%), Postives = 148/340 (43.53%), Query Frame = 2
Query: 56 AFLGDYGTEKVLQDSLRLIPEVANGLFSIDRKFWWPLNKIFPFSFGPAMKSRKKFDTMIAGVIQERRSALLMGDSGVRNVGVLDTMLEMQAKQRAAGGPRDGEIEYDDEFICDNICTAMFAGFDTSSATLARILQFLVSNESKELDLKKQLLEELSGSVAVEEHYVEEEPTNGSSNARGSPEKGVFHSFPLLDAVVLESNRMSPAVGGVIRKAMKTMEFNGFLIPEGESISWSLINGYVSDSFYPQHTKFCPYRFLQGGKIGSIPSNGAMSPAEAHGNQPRPQMFGYGKHMCPGKELAKLEILLFLKFFLPKYGYRLVEGQNLGGFMARNAPKDGLRLVL 1075
AFL E+ L+ L + ++ GL S+ W +F A K R + M I RR L G S +++ L +L + +G++ DD+ I DNI + +FAG DTSS++LA L+ L N + +L+++ L+ LS EE + V+ E+ R+ P G++RKA+K +E +GF IP+G + S Y F+ + KF P RF +G G +P FG G +CPG +LAK+++++FL + +Y + LVE + P GL + L
Sbjct: 155 AFLSVSDEEEQLE-LLEPLAKIIKGLISLPLDLPWT-------NFHHAKKGRVELYKMFDKYIARRRIELENGSSSQQDL--LSLLLSTKLD--------NGKLMNDDQ-IKDNILSLLFAGHDTSSSSLAMTLKCLAQNPACYQELRREHLDILSAKQPGEELNQND-----------------LRKMKYTWMVIQETLRVMPTGFGILRKALKDIEMDGFTIPKGWQLLISGYRSYRKPEFFAEPFKFEPSRFAEG--TGPVPYTYIP--------------FGGGPRICPGIQLAKMQVMVFLHHLVTRYEWTLVEPDEPVSYTPVAMPTKGLPIKL 442
BLAST of mRNA_H-elongata_contig6730.14339.1 vs. uniprot
Match: A0A835R543_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835R543_VANPL) HSP 1 Score: 102 bits (254), Expect = 9.430e-20 Identity = 97/362 (26.80%), Postives = 160/362 (44.20%), Query Frame = 2
Query: 2 EVRMFDEIASFTMEVIVYAFLGDYGTEKVLQDSLRLIPEVANGLFSIDRKFWWPLNKIFPFSFGPAMKSRKKFDTMIAGVIQERRSALLMGDSGVRNVGVLDTMLEMQAKQRAAGGPRDGEIEYDDEFICDNICTAMFAGFDTSSATLARILQFLVSNESKELDLKKQLLEELSGSVAVEEHYVEEEPTNGSSNARGSPEKGVFHSFPLLDAVVLESNRMSPAVGGVIRKAMKTMEFNGFLIPEGESISWSLINGYVSDSFYPQHTKFCPYRFLQGGKIGSIPSNGAMSPAEAHGNQPRPQMFGYGKHMCPGKELAKLEILLFLKFFLPKYGYRLVEGQNLGGFMARNAPKDGLRLVLTTTG 1087
E+ F + F+ +V + A G + E+ L V G S F W +G AM++R + ++ V++ERR D+G +L ++E + ++ GG DE I DN+ +FA DT+++ L ++++L N+ +L LK E++ A+ E NG R E S PL ++LES RM+ + R+A+ +E+ G LIP+G + N + + F+ KF P RF + P P FG G+H CPG ELAKL++L+F+ + +Y + +V Q + PK GL + L+ +G
Sbjct: 169 ELGSFQALKRFSFDVGILAIFGGHFVEQRRNAFLENYLVVDKGYNSFPTNFKWT-------PYGKAMRARSRLGDLLREVVKERREK---DDAGTD---LLSCLMEWRDEE---GG------RLSDEQIADNVIGLLFAAQDTTASVLTWLIKYL--NDHPKL-LKAAKAEQM----AIYE-------MNGCG--RRPLEWTQIKSMPLTYKIILESLRMASVISFAFREAVADVEYKGCLIPKGWKVMPLFRNIHHNPDFFSDPQKFDPSRF------NTSPMPNTFLP------------FGNGEHACPGNELAKLQMLVFVHQLVTQYRFEVVGSQTEVEYGPFPVPKHGLPVRLSRSG 474
BLAST of mRNA_H-elongata_contig6730.14339.1 vs. uniprot
Match: D8RBG9_SELML (Uncharacterized protein CYP707A20 n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RBG9_SELML) HSP 1 Score: 100 bits (249), Expect = 3.810e-19 Identity = 94/363 (25.90%), Postives = 158/363 (43.53%), Query Frame = 2
Query: 5 VRMFDEIASFTMEVIVYAFLGDY--GTEKVLQDSLRLIPEVANGLFSIDRKFWWPLNKIFPFSFGPAMKSRKKFDTMIAGVIQERRSALLMGDSGVRNVGVLDTMLEMQAKQRAAGGPRDGEIEYDDEFICDNICTAMFAGFDTSSATLARILQFLVSNESKELDLKKQLLEELSGSVAVEEHYVEEEPTNGSSNARGSPEKGVFHSFPLLDAVVLESNRMSPAVGGVIRKAMKTMEFNGFLIPEGESISWSLINGYVSDSFYPQHTKFCPYRFLQGGKIGSIPSNGAMSPAEAHGNQPRPQMFGYGKHMCPGKELAKLEILLFLKFFLPKYGYRLV---EGQNLGGFMARNAPKDGLRLVLT 1078
+ F E+ + +V V G G +K +D R + G S +P++ I + AMK+RK+ ++++ +I +RR D+G R L T++E Q D D+ I DN+ +FA DT+++ L +L++L N + LLE SV E + G+ + K + PL V+ E+ R++ + R+A++ +E+NG++IP+G + N + S F+ + KF P RF + K + FG G H CPG+ELAKLE+L+ + ++ + EG G F PK GL + +T
Sbjct: 153 INTFQEMKKYAFDVGVLKIFGGSLDGLDK--EDLKRAYQTLERGYNS------FPID-IAGTPYNAAMKARKRLSSIVSRIILDRRRQQKQADNG-RCKDFLSTLMESQD---------DSCKNLTDDQIADNVIGVIFAAQDTTASVLTWLLKYLKENPA--------LLE----SVTAEHENIRRSKPEGAKGLTWADTK----NMPLTSRVIQETMRLATILSFTFREAVQDVEYNGYVIPKGWKVMPLFRNIHHSPEFFLEPQKFNPSRFEEHPKPNTF------------------MPFGNGIHSCPGRELAKLEMLVLVHNITTQFRWEFAGPTEGVQYGPFPV---PKAGLPISIT 459
BLAST of mRNA_H-elongata_contig6730.14339.1 vs. uniprot
Match: A0A443P081_9MAGN (Abscisic acid 8'-hydroxylase 4 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443P081_9MAGN) HSP 1 Score: 100 bits (249), Expect = 4.200e-19 Identity = 91/352 (25.85%), Postives = 158/352 (44.89%), Query Frame = 2
Query: 14 FDEIASFTMEVIVYAFLG--DYGTEKVLQDSLRLIPEVANGLFSIDRKFWWPLNKIFPFSFGPAMKSRKKFDTMIAGVIQERRSALLMGDSGVRNVGVLDTMLEMQAKQRAAGGPRDGEIEYDDEFICDNICTAMFAGFDTSSATLARILQFLVSNESKELDLKKQLLEELSGSVAVEEHYVEEEPTNGSSNARGSPEKGVFHSFPLLDAVVLESNRMSPAVGGVIRKAMKTMEFNGFLIPEGESISWSLINGYVSDSFYPQHTKFCPYRFLQGGKIGSIPSNGAMSPAEAHGNQPRPQMFGYGKHMCPGKELAKLEILLFLKFFLPKYGYRLVEGQNLGGFMARNAPKDGL 1063
F E+ + +V + A G D ++ L+ + R+I + N +P N I + A+ +RK+ +++ +I+ER+ + +L ++ ++ + RA G ++ DNI +FA DT+++TL IL++L N LLE +V E++ + E G S + + PL VVLE+ RM+ + R+A+ +E+ G+LIP+G + N + + F+ + KF P RF K + FG G H CPG ELAKLE+L+F+ + K+ +++V QN + PK+GL
Sbjct: 171 FHEMKKLSFDVGILAIFGRLDADIKEELKKNYRIIDKGYNS---------FPTN-IPGTKYYNAVSARKRLSKIVSEIIRERKEKWSVEKD------LLGGLVNLKDETRALPG---------EDIATDNIIGMLFAAQDTTASTLTWILKYLSDNPK--------LLE----AVKAEQNAIYESNEGGKLPLTWSQTR----NMPLTHRVVLETMRMATIISFTFREAVTDVEYKGYLIPKGWKVMPLFRNIHHNPEFFREPQKFDPSRFEVAPKPNTF------------------MPFGNGVHSCPGNELAKLEMLIFVHHLVTKFRWKVVGPQNGIQYSPFPVPKNGL 463
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 280.8 |
| Seed ortholog evalue | 9e-73 |
| Seed eggNOG ortholog | 2880.D7G2E4 |
| Preferred name | CYP26A1 |
| KEGG rclass | RC00144,RC00154,RC00206,RC00257,RC00524,RC00613,RC00661,RC00723,RC00724,RC00773,RC01218,RC01453,RC01504,RC01622,RC02078,RC02079,RC02664,RC03041,RC03235 |
| KEGG ko | ko:K04123,ko:K07437,ko:K09587,ko:K09588,ko:K09589,ko:K09590,ko:K09843,ko:K12637,ko:K12638,ko:K12639,ko:K12640,ko:K12664,ko:K12665,ko:K17875,ko:K20667 |
| KEGG Reaction | R06294,R06295,R06296,R06297,R07202,R07430,R07431,R07444,R07445,R07448,R07449,R07450,R07451,R07452,R07453,R07454,R07455,R07457,R07458,R07471,R07786,R07787,R07791,R07792,R08390,R08392,R08840,R08841,R09815,R09816,R09817,R10067,R10669,R10682,R10683,R10684 |
| KEGG Pathway | ko00830,ko00904,ko00905,ko00906,ko01100,ko01110,map00830,map00904,map00905,map00906,map01100,map01110 |
| KEGG Module | M00371 |
| GOs | GO:0000003,GO:0000226,GO:0000280,GO:0000902,GO:0000904,GO:0001101,GO:0001501,GO:0001523,GO:0001568,GO:0001578,GO:0001655,GO:0001709,GO:0001756,GO:0001767,GO:0001768,GO:0001775,GO:0001822,GO:0001944,GO:0001972,GO:0002376,GO:0002682,GO:0002694,GO:0003002,GO:0003006,GO:0003007,GO:0003131,GO:0003151,GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0005501,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006081,GO:0006082,GO:0006091,GO:0006629,GO:0006694,GO:0006714,GO:0006720,GO:0006721,GO:0006722,GO:0006766,GO:0006775,GO:0006805,GO:0006950,GO:0006952,GO:0006954,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007140,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007276,GO:0007283,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0007584,GO:0008144,GO:0008150,GO:0008152,GO:0008202,GO:0008219,GO:0008289,GO:0008299,GO:0008300,GO:0008395,GO:0008401,GO:0008544,GO:0008610,GO:0009056,GO:0009058,GO:0009111,GO:0009314,GO:0009410,GO:0009411,GO:0009414,GO:0009415,GO:0009416,GO:0009555,GO:0009605,GO:0009628,GO:0009639,GO:0009642,GO:0009646,GO:0009647,GO:0009653,GO:0009685,GO:0009686,GO:0009687,GO:0009719,GO:0009725,GO:0009741,GO:0009753,GO:0009755,GO:0009790,GO:0009791,GO:0009792,GO:0009826,GO:0009846,GO:0009856,GO:0009860,GO:0009867,GO:0009887,GO:0009888,GO:0009893,GO:0009908,GO:0009909,GO:0009911,GO:0009913,GO:0009932,GO:0009952,GO:0009954,GO:0009965,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010012,GO:0010016,GO:0010033,GO:0010035,GO:0010114,GO:0010154,GO:0010162,GO:0010171,GO:0010208,GO:0010224,GO:0010268,GO:0010295,GO:0010358,GO:0010431,GO:0010468,GO:0010584,GO:0010604,GO:0010628,GO:0010646,GO:0010648,GO:0010817,GO:0010830,GO:0010831,GO:0010927,GO:0012501,GO:0012505,GO:0014031,GO:0014032,GO:0014033,GO:0014070,GO:0014706,GO:0016020,GO:0016042,GO:0016043,GO:0016049,GO:0016053,GO:0016054,GO:0016101,GO:0016102,GO:0016103,GO:0016107,GO:0016114,GO:0016115,GO:0016125,GO:0016128,GO:0016129,GO:0016131,GO:0016132,GO:0016134,GO:0016135,GO:0016137,GO:0016138,GO:0016202,GO:0016491,GO:0016705,GO:0016709,GO:0019222,GO:0019752,GO:0019825,GO:0019840,GO:0019953,GO:0020037,GO:0021532,GO:0021546,GO:0021570,GO:0021593,GO:0021661,GO:0021700,GO:0021797,GO:0021871,GO:0021903,GO:0021915,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0022611,GO:0022900,GO:0023051,GO:0023052,GO:0023057,GO:0030010,GO:0030104,GO:0030154,GO:0030198,GO:0030216,GO:0030278,GO:0030326,GO:0030522,GO:0030855,GO:0030900,GO:0030902,GO:0030917,GO:0031016,GO:0031090,GO:0031406,GO:0031424,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032526,GO:0032787,GO:0032870,GO:0032989,GO:0033189,GO:0033273,GO:0033293,GO:0033561,GO:0033993,GO:0034653,GO:0034672,GO:0034754,GO:0035051,GO:0035107,GO:0035108,GO:0035113,GO:0035282,GO:0035295,GO:0036094,GO:0039017,GO:0040007,GO:0042110,GO:0042175,GO:0042221,GO:0042363,GO:0042445,GO:0042446,GO:0042476,GO:0042573,GO:0042574,GO:0042592,GO:0042692,GO:0042814,GO:0043009,GO:0043062,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043288,GO:0043290,GO:0043436,GO:0043586,GO:0043587,GO:0043588,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0045165,GO:0045229,GO:0045321,GO:0045580,GO:0045595,GO:0045597,GO:0045619,GO:0045844,GO:0046164,GO:0046345,GO:0046394,GO:0046395,GO:0046649,GO:0046906,GO:0048037,GO:0048229,GO:0048232,GO:0048284,GO:0048285,GO:0048316,GO:0048366,GO:0048367,GO:0048384,GO:0048385,GO:0048387,GO:0048437,GO:0048438,GO:0048441,GO:0048443,GO:0048444,GO:0048448,GO:0048449,GO:0048455,GO:0048465,GO:0048466,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048532,GO:0048562,GO:0048568,GO:0048580,GO:0048582,GO:0048583,GO:0048585,GO:0048588,GO:0048589,GO:0048598,GO:0048608,GO:0048609,GO:0048634,GO:0048636,GO:0048641,GO:0048643,GO:0048646,GO:0048653,GO:0048654,GO:0048655,GO:0048656,GO:0048657,GO:0048658,GO:0048701,GO:0048704,GO:0048705,GO:0048706,GO:0048729,GO:0048731,GO:0048736,GO:0048738,GO:0048762,GO:0048793,GO:0048827,GO:0048831,GO:0048838,GO:0048854,GO:0048856,GO:0048863,GO:0048864,GO:0048868,GO:0048869,GO:0048871,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050863,GO:0050865,GO:0050878,GO:0050891,GO:0050896,GO:0051094,GO:0051146,GO:0051147,GO:0051149,GO:0051153,GO:0051155,GO:0051216,GO:0051239,GO:0051240,GO:0051249,GO:0051321,GO:0051704,GO:0051716,GO:0051777,GO:0055001,GO:0055002,GO:0055006,GO:0055007,GO:0055011,GO:0055013,GO:0055014,GO:0055088,GO:0055114,GO:0060173,GO:0060255,GO:0060322,GO:0060323,GO:0060348,GO:0060349,GO:0060363,GO:0060365,GO:0060429,GO:0060485,GO:0060536,GO:0060537,GO:0060560,GO:0061004,GO:0061053,GO:0061061,GO:0061436,GO:0061448,GO:0061458,GO:0065007,GO:0065008,GO:0070268,GO:0070887,GO:0071229,GO:0071295,GO:0071299,GO:0071300,GO:0071310,GO:0071395,GO:0071396,GO:0071466,GO:0071495,GO:0071496,GO:0071695,GO:0071704,GO:0071840,GO:0072001,GO:0072048,GO:0072098,GO:0072329,GO:0072358,GO:0072359,GO:0080132,GO:0085029,GO:0090242,GO:0090567,GO:0090596,GO:0090696,GO:0090697,GO:0090698,GO:0097094,GO:0097159,GO:0097438,GO:0098827,GO:0099402,GO:0140013,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901657,GO:1901659,GO:1901700,GO:1901701,GO:1901861,GO:1901863,GO:1902105,GO:1902644,GO:1902809,GO:1902811,GO:1903046,GO:1903706,GO:1904888,GO:1905392,GO:1905393,GO:2000026,GO:2000241,GO:2000243,GO:2001014,GO:2001016,GO:2001035,GO:2001037 |
| EggNOG free text desc. | cytochrome p450 |
| EggNOG OGs | COG2124@1,KOG0157@2759 |
| EC | 1.14.13.112,1.14.13.134,1.14.13.201,1.14.13.79,1.14.13.93 |
| COG Functional cat. | Q |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko00199,ko01000 |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Model size | 1433 |
| Cds size | 1083 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622931063.9487755-UTR-H-elongata_contig6730:1993..2003 | 1622931063.9487755-UTR-H-elongata_contig6730:1993..2003 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig6730 1994..2003 + |
| 1691679683.0711298-UTR-H-elongata_contig6730:1993..2003 | 1691679683.0711298-UTR-H-elongata_contig6730:1993..2003 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig6730 1994..2003 + |
| 1622931064.1726556-UTR-H-elongata_contig6730:9321..9661 | 1622931064.1726556-UTR-H-elongata_contig6730:9321..9661 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig6730 9322..9661 + |
| 1691679683.1914587-UTR-H-elongata_contig6730:9321..9661 | 1691679683.1914587-UTR-H-elongata_contig6730:9321..9661 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig6730 9322..9661 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622931063.9679203-CDS-H-elongata_contig6730:2003..2270 | 1622931063.9679203-CDS-H-elongata_contig6730:2003..2270 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig6730 2004..2270 + |
| 1691679683.0890136-CDS-H-elongata_contig6730:2003..2270 | 1691679683.0890136-CDS-H-elongata_contig6730:2003..2270 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig6730 2004..2270 + |
| 1622931064.006215-CDS-H-elongata_contig6730:2624..2744 | 1622931064.006215-CDS-H-elongata_contig6730:2624..2744 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig6730 2625..2744 + |
| 1691679683.1080847-CDS-H-elongata_contig6730:2624..2744 | 1691679683.1080847-CDS-H-elongata_contig6730:2624..2744 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig6730 2625..2744 + |
| 1622931064.0970662-CDS-H-elongata_contig6730:3137..3224 | 1622931064.0970662-CDS-H-elongata_contig6730:3137..3224 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig6730 3138..3224 + |
| 1691679683.1205676-CDS-H-elongata_contig6730:3137..3224 | 1691679683.1205676-CDS-H-elongata_contig6730:3137..3224 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig6730 3138..3224 + |
| 1622931064.1128805-CDS-H-elongata_contig6730:7072..7245 | 1622931064.1128805-CDS-H-elongata_contig6730:7072..7245 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig6730 7073..7245 + |
| 1691679683.1364534-CDS-H-elongata_contig6730:7072..7245 | 1691679683.1364534-CDS-H-elongata_contig6730:7072..7245 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig6730 7073..7245 + |
| 1622931064.126921-CDS-H-elongata_contig6730:7508..7652 | 1622931064.126921-CDS-H-elongata_contig6730:7508..7652 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig6730 7509..7652 + |
| 1691679683.1536415-CDS-H-elongata_contig6730:7508..7652 | 1691679683.1536415-CDS-H-elongata_contig6730:7508..7652 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig6730 7509..7652 + |
| 1622931064.1435263-CDS-H-elongata_contig6730:7996..8213 | 1622931064.1435263-CDS-H-elongata_contig6730:7996..8213 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig6730 7997..8213 + |
| 1691679683.1646101-CDS-H-elongata_contig6730:7996..8213 | 1691679683.1646101-CDS-H-elongata_contig6730:7996..8213 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig6730 7997..8213 + |
| 1622931064.1590083-CDS-H-elongata_contig6730:9246..9321 | 1622931064.1590083-CDS-H-elongata_contig6730:9246..9321 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig6730 9247..9321 + |
| 1691679683.1818614-CDS-H-elongata_contig6730:9246..9321 | 1691679683.1818614-CDS-H-elongata_contig6730:9246..9321 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig6730 9247..9321 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6730.14339.1 >prot_H-elongata_contig6730.14339.1 ID=prot_H-elongata_contig6730.14339.1|Name=mRNA_H-elongata_contig6730.14339.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=361bp
MFDEIASFTMEVIVYAFLGDYGTEKVLQDSLRLIPEVANGLFSIDRKFWW PLNKIFPFSFGPAMKSRKKFDTMIAGVIQERRSALLMGDSGVRNVGVLDT MLEMQAKQRAAGGPRDGEIEYDDEFICDNICTAMFAGFDTSSATLARILQ FLVSNESKELDLKKQLLEELSGSVAVEEHYVEEEPTNGSSNARGSPEKGV FHSFPLLDAVVLESNRMSPAVGGVIRKAMKTMEFNGFLIPEGESISWSLI NGYVSDSFYPQHTKFCPYRFLQGGKIGSIPSNGAMSPAEAHGNQPRPQMF GYGKHMCPGKELAKLEILLFLKFFLPKYGYRLVEGQNLGGFMARNAPKDG LRLVLTTTGA* back to topmRNA from alignment at H-elongata_contig6730:1994..9661+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig6730.14339.1 ID=mRNA_H-elongata_contig6730.14339.1|Name=mRNA_H-elongata_contig6730.14339.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7668bp|location=Sequence derived from alignment at H-elongata_contig6730:1994..9661+ (Himanthalia elongata Himel1 dioecious) GGAAGTGCGTATGTTCGACGAAATCGCTAGTTTCACCATGGAAGTCATCG
TTTATGCCTTCCTCGGCGACTACGGCACGGAGAAGGTTCTTCAAGATAGT
TTACGCCTCATCCCTGAAGTGGCCAATGGTTTGTTCAGCATTGATCGGAA
ATTTTGGTGGCCACTGAACAAAATATTCCCGTTCAGTTTCGGGCCGGCAA
TGAAATCTCGGAAGAAGTTCGACACTATGATAGCAGGAGTGATACAAGAG
CGTCGATCGGCGTTATTAATGGGTGATGTAAGTGACAGCTCAAGATATCT
ACCCAAAATTCTCCGGGAAGTCTGATGAATTCACGAGTTCAGGAACTATT
TAGGACTAGGCATAATATAGTCATCTACGAACATTGAAGCTATTAAATCA
CGCACTTTATGTTTATTTTGCTGCTACAAACTTCTGAACTTTTTTTTTGA
ATTGCGTGAGTGGGTAATAGAATTTATGAATCTATCGTTTTATTAAATTT
GCGACGTTATGATTGACATATTTACAATAAGGTAACTGTTGAGTAGTCAC
TCGCGTGGTATTTTGCGTAATCGTAGAGAAATATCCTGCACTCTTGCCTC
GCCATTTATTACCGCCTTCGACTTAATCAAGAGCGGTGTCCGCAACGTGG
GAGTGCTGGATACGATGCTTGAAATGCAAGCAAAGCAGCGTGCGGCCGGC
GGGCCAAGGGATGGAGAAATCGAGTATGATGATGAATTCATTTGCGACAA
TGTGAGCCAGAGACACTACATCCTGACGTCAAGTTGTGCAAAGACATGGA
CGGCATGGTGTATAGAGCCACTTTGGTGTTGTACCGCACACTAGCGTGGC
GCCTGCCGTTCTGTAAACGTGTGCTTCACGGTACGATGATCTCTTCACGA
TACAATAATCTAGCTCACCCTAGTGGCGAAGTTAAGATAATGAATAGAGC
GAGTCATAAAAGCTTTCAGCAATGGCTTTTACTACAGCTAGTATTCATTT
TCGTGCGGAACACGTTATATTTGCACATTCTCTTTTAATTATCAAATTAA
GCCTCGAACTGCTCCGTACAAACTGCTATCACGCCTGTTCGTCTTCCTTC
CTCCCTTTGCACCACGTCGAGGGGGTAACTATGCGACGCCGCAGATCTGC
ACCGCTATGTTTGCGGGTTTCGATACTTCGTCGGCCACCCTGGCGAGAAT
CCTGCAGTTTCTTGTTTCGAACGAAAGCAAGGTGAACCGTTCGGAAGTAC
TGGAATAAGTATATTTTACATTTGTTACGCGAATTTACATAATATTAGAA
TTGTAAGTATAAAGAGAAGTTGGATGACGTATTACCTAGGTCTAAATTAT
TCCTCTTTCTCCCCCTCCCCTTTCAGGTAGCATTGACGTCGTGATCTACA
TTCATCTTTGAAAATATATAGGCGACGTCATTCTGGATGCAAAGCAGACC
TGCTAGACGTTTTTAATATTTGGTCGCATTTCACACATACCATGTAAGCG
AAGCCCAAAAGAACCAAGCCAAGGCAATATCATTGTAAGTGCACTGGTGT
GATTATAACAGACCAGACTGGGTGGGTACATCAACTACCAACGACACCGA
GCGAGAAATTCATCTCCGGGTGGCCTGTCATTCAGTACTCCACCCTTGTA
GTCAAAGCATGCCTCCGTATAAAACTTGAACTTTCTAGAACCCTCAGAAC
ATAGGTACCTCTTTTACAACGGCTTGTTCGAGGGGACTAAACATCGTCAT
GTTCGAGATTGTATATTGCTAATTAATGTCCATCTCTCGTGATATAATCA
AGAGAAATCATGGATCGACTATGAGCAAAGAGACATCGGACCATTTGGTA
TAAAAGAGAGGGAGTGGATGGAGGTTCACCGGATGCTACAGAGGAAAGGA
GAATATGCGTCCCAAATCCATCAGGAGAAAAATGTCGAAATGATTTGAGA
GCGATACTGCTGCGCTAGATGTTGAGGCTTGAAAGGCTTACAAGGCGCTC
TTATACCCCTTGGAATGTTGATTGAGTCACGTATACGGCGAAGGTGTTGC
AGTCGAGTCCACACTTACTTGTATCGCACCAGCTGAAAGGTGAAGGAGAC
TATAGCCTTTCGAGGGGTTAGTACCCTCGAAGCGATGCCGCTTGATCTAG
TAGATCGTTCGAAAGAACCCTTTACAGATACGACACGGACAAAGACGGTG
TAGTGTCTAGGCCCGTGAATGTGTAACATAGCACCCCCCTGACCAAAGAC
CGTGTTTTGTGTTTTGTTTTAACATCTCCGATTTTGTTTTCCTACAATAT
TTTTTTGTTTTCTTCTTTTTCTAGACAAGCTGATAGGTACCTCTAAGAAT
TTTATAGGAGATCCGGAATTGGTTGGTCACCGTGTACAGTAAAAAGCTTG
CTCTGCTAGCCAATCCGCTGAGAATAGTGGTTTACAACGAAACAAACGAG
TTTGCATACTTCGCGGGGAACGTCAATAACAACGCCGAGCTGTCCATCGA
GGTCGACCGACGTCTACGCAACACATGGTGCAGCTTCCGTAAGTACACCC
TTGGAATGTACGACTGACCATGCGCCCCTCTCGAGGTCAAAATCCGGATG
CTCAAAGTCGAGGTACTCGAGGCAGCGTTGTACGACTGCGTCACGTGGAG
CCCGCGCGCGTGCCACTACGACACGCTGTGCCAAGTCTACCACAGCTTCC
TGACTCGTTTTATGGGTTGGCGAAAAAATAAGCGCACTAACCACTCGATC
TCTTATTTGAACACCTTCCTGAAAACGGGAAGTGAGAGCATCGAGGGGAT
CATGGACAGAAGGCGGATCCTGTTCGAGGGATTTGTGGTGCCCATGGACG
ACGCAACACTGCCAAAGTGCGTGATGTGTGGAGAAATCATGGGAGGCGCG
GGATGCGTGGGGAAAATGAAAAATAGTTAATGGGGTGCCTTCTGGATGAC
CTCAAAGCTTTCCCTATCACCACCGACCAGTGGAAGACTGCATCTCAAAA
TGAGGGAGAGTATCCCAAGACGGCGGAATAAGGGGCGGAACCTTTCATGA
TTTGATTGCTGTAGATAAAGTAAAGACTGGACTACGGTATGCAGTAGTAT
GTTCAATCGTGACGTGAAGGGACAAGGAGAGGATAGCCCAAAACAAGTGT
GCCCCTGCTGGTTTGCTTGCCATAGTTGATTAACCACAAGTGGTGGAAAC
TTATCCCCCGGGCGTTTTTGCTTGCCGATGTCATATCAGTTTTTCCTCTA
GCGTTACATTTTTTTTTTCTCTCGTTTTCGTCTTTTTGTTTTTGTTTTCA
TCTTCAATATACATGCGATCCGACAGCCACACGCAGTTCATTGATAAATC
TATGTTCAGTTTTTTAAATTATTTTCTTGGGAGGTGTACCTTTTTCCGAG
TATTATGCACCATTACGGTTTTCTTTTGTATGGGGAGTACGCTAAACGTT
TTCCTTCTGAATGGTGCGTTTCTATCTTGTGTGACCACGGACTGGATTTT
GACATCAGCTTATATGAGGATTCAATCAAAAATTGAAATCAAGTGTGTAT
GCGTGTATGTGTGTGTGGTCATCACAAATAGCATAGTATGGGTCAGCCGT
GTATGGTTGCCAATCCTGCTCGTGGTCAGCTGAACAGGAAAAATTATTTT
CCCCTTTTATCAATTTCCGTTATACCGCACAAGCCGGCATTACACGTTAG
TGTGCGCCAAACCGGTTTGCATCCGTCCCCATCCCCCCGCCCCCCCCCCT
TGGGAGCTATCCCGGAAAACGTTGGATTGGCTTACCCTACTCGCATTGTT
TACGCCACCACGTCGGACTACCGCTGCATTTCTCCCTCCTGCCCCTGCTG
CCCCACCACTGGGCGCAATATTCCGTGGCTTTGGCGTTTTTAATGGCACC
ACGGCCCAATCCCCCTCTATTCCCAGCTCGGTTGAGGCCTCCATCCCGGT
TCCGATCCCGCGGATTCCCTCCGTTTGCGGGACGGCCACCATCGCTACCC
TCGTTACCAGCGCCGCCGTATTCTTCACTCTGGCAGCAGGTGCACGCGCC
TCGATCCCTCTAGCCCCCTCTATCAACTTCGAGGACAGGCGCCTTCCCCG
CTCAATTCCTACAATCTACGTCATAGTGACAGCGGTCACCCGCGCCAATG
TCGCTGTCGCCGCAACCGCGCCGGCACCAGCCCCTGCATGCCGCATTGTC
ACTTATACTGGTTGTGCGACTGCTGCCGGTGATATCGGTTCCTCGCCTTC
ATTAAGTACCGGTGGCATGACGCTCCATTGAATTCCGTCCTCCCATCGCT
GTGCTAGCCGCCGCTGCAAGCGAAACGATTCCCTCTTCGACTCCCTCCTT
CTCCTTCGCCACCGCCGCAGCCGCTGCGAATGCGAATGCTTCCGCCACTA
CCGTTGCAATGGCGCTAGACCTTGCGCCTTCTTTCTTGCTAGGGCTTGGC
TGTCTGCTGGTGCCGTAGTTCCTCGGCCAACGGCTCGGGTCATAGCCTCG
CGGGTCCTTGCAGAAAGCGCCCGGTTCAAGGCGAAGGACTAGTATTGCCT
AAGGTTTGCCATATCTTCTTCCTTGCCACTGCTAGTTGATCGCTATCATT
TTCCCTTTCCCCGTCGTGCCTGAGAATTTGGGCTTGCGAGACGGGTTCGG
CCGTCCCCCGCGTCAGCCCACTCATCATTCCAACCCAGGCTAACTCGTAC
CGAGAGGCGATACCGATTTGTGCTAGTGTTTGTATGGCCGATGTACTACT
CTCTACATTTTATTTGTTTTATTGGTGTGCATCCAGTTCACTCTCCTCGA
CTCTAATTGTAATCCTCAACGAAGTATATTTTACTTTTTACTACATTTTG
AGTGCCTTTTTTTGTGTGTGTTTCTTTGATTGTTTCCTGTCAATTAGCGA
ACCATGACCAGGGTTAGGATTTTATGGCCCACCGGCATAATATGAGAATA
GCGTCAACTTGGAGTCTTGGCCGCGGAACATACAAAACACTTGGATCCAT
ATCACATTGAGAACAGTTGCCTCGCCTAATGTTCCCATTCTTATTTTAAT
ACATACCCCGTCTTTTTCGTTCTCTTCAGGAGCTTGACCTTAAGAAGCAG
CTGCTGGAAGAGCTCAGCGGCAGCGTGGCTGTGGAAGAGCACTACGTGGA
AGAAGAACCCACAAATGGTTCAAGCAACGCCCGGGGGAGCCCAGAAAAAG
GCGTCTTCCACTCCTTCCCCTTGCTCGACGCCGTCGTTTTGGAGAGTAAC
AGGCATGCCCCACGTATACCTACCTTGAGCACGCGCTGTGTGTGCTCCTC
ATCATGAAAAATATGAAATGAAGCCCTTTTCGCCTAGGATAACTGTACTT
GTTTCTTTTTCCATTTCCTTTTTTCAAGCCTTGATTCGAACAAGCGCAAA
TCTGATCGTGAGGCGGTACTGGTGTAATATATCCAAAACTTCCATAGCGC
AACCGACCGAATTGAGCTTCCCTTTATGACATTTGATTGTTTTTGCTGTT
TCCTGGTCGAGGCAGGATGTCTCCTGCTGTTGGAGGTGTGATCCGCAAGG
CAATGAAGACTATGGAGTTCAACGGGTTCCTTATCCCAGAGGGGGAATCG
ATCTCTTGGAGTCTAATCAACGGATATGTTTCCGACAGCTTTTATCCCCA
ACACACGAAGTGAGAACGAATCAGCTTCGCTGATATGGTCTCGCTTCTTG
CCTTCGCTCTCGATGCTAACGCGGCATTAAGCGAACTACCAGTAGAAGTG
TCGACCAAGAGTTGAACACATCTGTTTTGTTTGGCGCGATGGCAACAAAC
TGAGAGATGGAACGTACACCAAGTCAGGAAAGCAGGGCCATGGAATAAAA
CCACTCTCTCAACTAAGGATATTCAAATATGTGACAATTTTTCCGTCTTA
CAAGTAAATCCAACCTTGTTTAAATGTCACCGGTGAACCCTTTAGTGATT
GACGTCGAACAAACTATTTTGCCTATTCTTTTATACGTCTGGCTACCCAC
TAGGTTCTGCCCCTATCGCTTCCTTCAAGGCGGAAAAATTGGGTCGATAC
CGTCGAACGGCGCGATGTCCCCGGCCGAGGCGCACGGGAACCAGCCGCGT
CCTCAGATGTTCGGATATGGAAAGCACATGTGTCCCGGCAAAGAGTTGGC
GAAATTGGAGATATTATTGTTCCTCAAGTTCTTCCTCCCCAAATATGGGT
ACCGATTGGTCGAGGGGCAGGTGTGTTGGATGCTTATGTGAGACATGAGG
TGTGCGTTTTAGTGCCTGCATGTAACATAATTGTAATTCTACTGTAAAGC
AGAAGGAAGTGACTCTGATTGAGCAGCACGTGCGATGTCGTGCGATATGC
CGTCCATTCGCCTTGCTTGCCCTTCGCGGCCTTCGCGGCCTTATTTTTAT
ATTATGTTGATGCACCAGGCAAGACAAATTTACAAAACTTATATCGATCC
CACCGGGTCGTGTCTGGTTCATTCACATACTAGGAGTGAGTAAGAGGTTT
ATACTAAGACCGATTTGCATATTATGTTCAAGCTCCAGGTGCGATAAAAA
TACTAAATTTGTCGCCTGAGTTCAATATGGGTTGGGTAATGTTCGTACCC
CAGCTTATGCGACCTAGCCTGGTGCGGTACGGCATGATATGGCGATATGG
TGCGTGGAGATCCATTACGAGTATCATGTTGAGATTTGTAGCACCATGGC
CCTTTGGGTTTTATCCTCCTCTGAAGGCTATACAGAATAGCGGAGAAGGG
GTTCCTTTATTAGGCAGTTTCGGTGTCTTCGAAAGTATCTGTCTCTTATC
GGATTCAGCGGTTTCGGCTGTAATTATACTCTCAGGAGGAGGCGTGTCTG
TGGGTTGCTAAGACATGGAGTGGGGCGAGATAGGGTGATTAAGGGGGGCT
AGGATTGAAGGCAGCTTGTTCTATTTTTTCTTTTCGATTTTTCTAGTAGT
GTGTTTGCAGTCCTTTGTTACAAGGGTTACCAGGTTTACGTGTTGATATC
GAATGTGTATCATTCATCGTTACGAAGACGTATAACGATTGCCCAGGTTG
TTTATTTTATTTTTCCTTTGTCGATTTTGTCCCGATGCTCTCGAGTTCGA
CACATGACCCCAGTTTATCATGCTCTGTTGCCTCCAGGTTAATGTATACC
CTTCCTGCACTATATCCCATGGCCAATAATTTATCACCTGGTGCCATACT
AAATATTGCCCGCCCTGCATGTCTGCCATTTTTGGGGGGTTTCGTCTTCG
CAGAATCTTGGAGGCTTCATGGCCCGCAATGCTCCGAAGGATGGCTTACG
TTTGGTGCTCACAACAACCGGGGCATGAAGCCATTCGTAGGGATAATGGG
AGCCGTTTGGGTCCCTGTGGCGGAAATGTATCTATCCATGTCGCCCCGGA
GGTTCAGTTGGTAACATCGAAACCTCCTGACGTTGGAACGTGGGTTCGAA
TCTCGGCGTAGTCACACGAACTGGGATTATCTCTCACATAATGCCCAAAA
GGTGGAGAACGATTATTTCGCGAGGCACAAAATCTGTCATCACGGTCGAC
GAGAGAAAGGAACTACTGAATCCTCCTTGCGATAAAAGTTAAGTGATAGT
ACTGCAGAAATAAAGTGGAGAAATTATGTGCGACCGTCCTCCTGTGTTAC
CCCGGCTGGTACGTCCAC back to topCoding sequence (CDS) from alignment at H-elongata_contig6730:1994..9661+ >mRNA_H-elongata_contig6730.14339.1 ID=mRNA_H-elongata_contig6730.14339.1|Name=mRNA_H-elongata_contig6730.14339.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2166bp|location=Sequence derived from alignment at H-elongata_contig6730:1994..9661+ (Himanthalia elongata Himel1 dioecious) ATGTTCGACGAAATCGCTAGTTTCACCATGGAAGTCATCGTTTATGCCTT CCTCGGCGACTACGGCACGGAGAAGGTTCTTCAAGATAGTTTACGCCTCA TCCCTGAAGTGGCCAATGGTTTGTTCAGCATTGATCGGAAATTTTGGTGG CCACTGAACAAAATATTCCCGTTCAGTTTCGGGCCGGCAATGAAATCTCG GAAGAAGTTCGACACTATGATAGCAGGAGTGATACAAGAGCGTCGATCGG CGTTATTAATGGGTGATATGTTCGACGAAATCGCTAGTTTCACCATGGAA GTCATCGTTTATGCCTTCCTCGGCGACTACGGCACGGAGAAGGTTCTTCA AGATAGTTTACGCCTCATCCCTGAAGTGGCCAATGGTTTGTTCAGCATTG ATCGGAAATTTTGGTGGCCACTGAACAAAATATTCCCGTTCAGTTTCGGG CCGGCAATGAAATCTCGGAAGAAGTTCGACACTATGATAGCAGGAGTGAT ACAAGAGCGTCGATCGGCGTTATTAATGGGTGATAGCGGTGTCCGCAACG TGGGAGTGCTGGATACGATGCTTGAAATGCAAGCAAAGCAGCGTGCGGCC GGCGGGCCAAGGGATGGAGAAATCGAGTATGATGATGAATTCATTTGCGA CAATAGCGGTGTCCGCAACGTGGGAGTGCTGGATACGATGCTTGAAATGC AAGCAAAGCAGCGTGCGGCCGGCGGGCCAAGGGATGGAGAAATCGAGTAT GATGATGAATTCATTTGCGACAATATCTGCACCGCTATGTTTGCGGGTTT CGATACTTCGTCGGCCACCCTGGCGAGAATCCTGCAGTTTCTTGTTTCGA ACGAAAGCAAGATCTGCACCGCTATGTTTGCGGGTTTCGATACTTCGTCG GCCACCCTGGCGAGAATCCTGCAGTTTCTTGTTTCGAACGAAAGCAAGGA GCTTGACCTTAAGAAGCAGCTGCTGGAAGAGCTCAGCGGCAGCGTGGCTG TGGAAGAGCACTACGTGGAAGAAGAACCCACAAATGGTTCAAGCAACGCC CGGGGGAGCCCAGAAAAAGGCGTCTTCCACTCCTTCCCCTTGCTCGACGC CGTCGTTTTGGAGAGTAACAGGAGCTTGACCTTAAGAAGCAGCTGCTGGA AGAGCTCAGCGGCAGCGTGGCTGTGGAAGAGCACTACGTGGAAGAAGAAC CCACAAATGGTTCAAGCAACGCCCGGGGGAGCCCAGAAAAAGGCGTCTTC CACTCCTTCCCCTTGCTCGACGCCGTCGTTTTGGAGAGTAACAGGATGTC TCCTGCTGTTGGAGGTGTGATCCGCAAGGCAATGAAGACTATGGAGTTCA ACGGGTTCCTTATCCCAGAGGGGGAATCGATCTCTTGGAGTCTAATCAAC GGATATGTTTCCGACAGCTTTTATCCCCAACACACGAAGATGTCTCCTGC TGTTGGAGGTGTGATCCGCAAGGCAATGAAGACTATGGAGTTCAACGGGT TCCTTATCCCAGAGGGGGAATCGATCTCTTGGAGTCTAATCAACGGATAT GTTTCCGACAGCTTTTATCCCCAACACACGAAGTTCTGCCCCTATCGCTT CCTTCAAGGCGGAAAAATTGGGTCGATACCGTCGAACGGCGCGATGTCCC CGGCCGAGGCGCACGGGAACCAGCCGCGTCCTCAGATGTTCGGATATGGA AAGCACATGTGTCCCGGCAAAGAGTTGGCGAAATTGGAGATATTATTGTT CCTCAAGTTCTTCCTCCCCAAATATGGGTACCGATTGGTCGAGGGGCAGG TTCTGCCCCTATCGCTTCCTTCAAGGCGGAAAAATTGGGTCGATACCGTC GAACGGCGCGATGTCCCCGGCCGAGGCGCACGGGAACCAGCCGCGTCCTC AGATGTTCGGATATGGAAAGCACATGTGTCCCGGCAAAGAGTTGGCGAAA TTGGAGATATTATTGTTCCTCAAGTTCTTCCTCCCCAAATATGGGTACCG ATTGGTCGAGGGGCAGAATCTTGGAGGCTTCATGGCCCGCAATGCTCCGA AGGATGGCTTACGTTTGGTGCTCACAACAACCGGGGCATGAAATCTTGGA GGCTTCATGGCCCGCAATGCTCCGAAGGATGGCTTACGTTTGGTGCTCAC AACAACCGGGGCATGA back to top
|