prot_H-elongata_contig67275.14336.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67275.14336.1
Unique Nameprot_H-elongata_contig67275.14336.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length228
Homology
BLAST of mRNA_H-elongata_contig67275.14336.1 vs. uniprot
Match: A0A6H5LAU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAU0_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 4.020e-103
Identity = 170/255 (66.67%), Postives = 192/255 (75.29%), Query Frame = 0
Query:    1 MTKLAIEIITGTVSQVVAEYQKRGKRFSQELEFVFADTLTCLFANFAAVWLSCPTVAVNA-SKKGVVKAGGALQHWLASCPSNAFQKVVTEGGVSKSFSMSQRGAALVIPMPKLFVVGFGATLFGYGLVAGLEYAQA-----------------AKIRR--------TGETCAEGEDKPAVPVLGSSLAIGTFLAVSTNVRYQFIAGAVEQRMFDTMAL--PGLSRLGSTFVRSANLYLGSLTIVDWLRFVGLQH 227
            MTKLAIE++TGT +Q +AEYQKRGKRF QEL+FV ADTLTCLFANFAAVWLSCPTVAV A  KK   KAGG LQ +LA+CPSNAFQKVV EGGVSK+FS+++RGAAL++PMPKLFV+GFGATL GYGL+AGLE   A                 AK +R             AE   KP VPVLGS LA+G FLAV TN+RYQFIAGAVEQR+FDTM    PGLS L ST VRSANLY+GSLTIVDWLR+VG+Q 
Sbjct:   49 MTKLAIEMVTGTGAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWTTAAAAAPPVVAGKGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ 303          
BLAST of mRNA_H-elongata_contig67275.14336.1 vs. uniprot
Match: D7FZL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL4_ECTSI)

HSP 1 Score: 307 bits (787), Expect = 1.210e-100
Identity = 169/255 (66.27%), Postives = 192/255 (75.29%), Query Frame = 0
Query:    1 MTKLAIEIITGTVSQVVAEYQKRGKRFSQELEFVFADTLTCLFANFAAVWLSCPTVAVNA-SKKGVVKAGGALQHWLASCPSNAFQKVVTEGGVSKSFSMSQRGAALVIPMPKLFVVGFGATLFGYGLVAGLEYAQA-----------------AKIRR--------TGETCAEGEDKPAVPVLGSSLAIGTFLAVSTNVRYQFIAGAVEQRMFDTMAL--PGLSRLGSTFVRSANLYLGSLTIVDWLRFVGLQH 227
            MTKLAIE++TGT +Q +AEYQKRGK+F QEL+FV ADTLTCLFANFAAVWLSCPTVAV A  KK   KAGG LQ +LA+CPSNAFQKVV EGGVSK+FS+++RGAAL++PMPKLFV+GFGATL GYGL+AGLE   A                 AK +R             AE   KP VPVLGS LA+G FLAV TN+RYQFIAGAVEQR+FDTM    PGLS L ST VRSANLY+GSLTIVD LR+VG+QH
Sbjct:  173 MTKLAIEMVTGTAAQFLAEYQKRGKKFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWRTAAAAAPPVVVERGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDGLRYVGVQH 427          
BLAST of mRNA_H-elongata_contig67275.14336.1 vs. uniprot
Match: A0A836CF64_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF64_9STRA)

HSP 1 Score: 189 bits (479), Expect = 1.080e-56
Identity = 109/225 (48.44%), Postives = 146/225 (64.89%), Query Frame = 0
Query:   15 QVVAEYQKRGKRFSQELEFVFADTLTCLFANFAAVWLSCPTV------AVNASKKGVVKAGGALQHWLASCPSNAFQKVVTEGGVSKSFSMSQRGAALVIPMPKLFVVGFGATLFGYGLVAGLEYAQAA----KIRRTGETCAEGEDKPAVPVLGSSLAIGTFLAVSTNVRYQFIAGAVEQRMFDTM--ALPGLSRLGSTFVRSANLYLGSLTIVDWLRFVGLQH 227
            QV+AEY+KR  +F +E +FV AD LT  FANFAAVW SCPT+      + +A+ KG+     +L  ++ SCPSNAFQ+VV     +  +S++QRGAAL+ PMP+LFV+GFGA   GYGL + + + + A     ++ T       ED    P+  SSLAIG FLAVS+N+RYQ IAG +EQR  D    + P +S   S  +R+ANLYLG+  IVDWLR VG+QH
Sbjct:    2 QVLAEYEKRRDKFFKEFDFVLADILTSCFANFAAVWASCPTMRPAIAGSADAASKGMF---ASLGRFMNSCPSNAFQRVVAP---ATHYSLAQRGAALIKPMPQLFVIGFGACAAGYGLTSLMSHIRLALDPTMVKNT-------ED---APIFKSSLAIGAFLAVSSNLRYQIIAGGIEQRFLDVALASKPAVSNACSFVLRTANLYLGASMIVDWLRIVGVQH 210          
BLAST of mRNA_H-elongata_contig67275.14336.1 vs. uniprot
Match: A0A7S3XYV0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYV0_HETAK)

HSP 1 Score: 152 bits (384), Expect = 1.420e-41
Identity = 94/227 (41.41%), Postives = 132/227 (58.15%), Query Frame = 0
Query:    1 MTKLAIEIITGTVSQVVAEYQKRGKRFSQELEFVFADTLTCLFANFAAVWLSCPTVAVNASKKGVVKAGGALQHWLASCPSNAFQKVVTEGGVSKSFSMSQRGAALVIPMPKLFVVGFGATLFGYGLVAGLEYAQAAKIRRTGETCAEGEDKPAVPVLGSSLAIGTFLAVSTNVRYQFIAGAVEQRMFDTMALPG--LSRLGSTFVRSANLYLGSLTIVDWLRFVGL 225
            +TK A+EI  G V Q+ AE ++RG +  Q+L+FV AD LTC+ ANF AVWL+ PT+A  A       AG A++ +  SCP NAFQKV T G     F+++QR   LV   P+LF+VGF A++ G+G   GL   +      + E    G     V VL  +L IG +L VSTNVRYQ +AG +E+R+   +      L+  GS   R+ N ++GS  +V  L++ GL
Sbjct:   74 LTKCAMEIGIGGVCQLAAEVKERGDKLLQQLDFVVADVLTCVIANFMAVWLAAPTLAALAPPPAA--AGNAVKRFFDSCPGNAFQKV-TPGRAP--FTVAQRCGTLVGAFPQLFLVGFAASVAGFGFTLGLSKLREKLNPASAEEEPLGGPAKEVQVLKPALVIGAYLGVSTNVRYQLVAGLLEERLLGALFANQQFLNTAGSFIFRTGNTFVGSSQMVMTLKWTGL 295          
BLAST of mRNA_H-elongata_contig67275.14336.1 vs. uniprot
Match: A0A7S1EMP3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EMP3_HEMAN)

HSP 1 Score: 145 bits (365), Expect = 8.640e-39
Identity = 89/229 (38.86%), Postives = 135/229 (58.95%), Query Frame = 0
Query:    1 MTKLAIEIITGTVSQVVAEYQKRGKRFSQELEFVFADTLTCLFANFAAVWLSCPTVAVNASKKGVVKAGGALQHWLASCPSNAFQKVVTEGGVSKSFSMSQRGAALVIPMPKLFVVGFGATLFGYGLVAGLEYAQAAKIRRTGETCAEG-EDKPAVPVLGSSLAIGTFLAVSTNVRYQFIAGAVEQRMFDTMALPGLS--RLGSTFVRSANLYLGSLTIVDWLRFVGLQ 226
            + K+AIE++ G   Q++AEYQ RGK F +E +FV A   TC+ ANF  ++L+ PT+   A+         A+  +  SCP NAFQ V+ +G  + SF   QR   +  PMP+LF +G  A   GY     L  A    +R+     ++G  D  A+ +    +A+G ++A+S+N+RYQF+AG +EQR+ DT+    +S    GST +R+AN YLGS  +V +LR++GLQ
Sbjct:   67 LNKVAIEVVIGGAMQLIAEYQNRGKAFVKEFDFVIAGIATCVLANFFTLYLAAPTLVPKAASLTT----SAVAKFFNSCPDNAFQTVL-KGMPAPSFV--QRCGGIFKPMPELFFIGLVAASGGY-----LYTACNVAVRKFFNPKSQGGADLDALQIGKIGVAVGAYVAISSNLRYQFMAGVLEQRVLDTLLAGQVSLRTAGSTVIRTANTYLGSYLLVAYLRWLGLQ 283          
BLAST of mRNA_H-elongata_contig67275.14336.1 vs. uniprot
Match: A0A833R1V6_9POAL (Protein RETICULATA-RELATED 4 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R1V6_9POAL)

HSP 1 Score: 146 bits (369), Expect = 1.520e-38
Identity = 92/228 (40.35%), Postives = 132/228 (57.89%), Query Frame = 0
Query:    1 MTKLAIEIITGTVSQVVAEYQKRGKRFSQELEFVFADTLTCLFANFAAVWLSCPTVAVNASKKGVVKAGGALQHWLASCPSNAFQKVVTEGGVSKSFSMSQRGAALVIPMPKLFVVGFGATLFGYGLVAGLEYAQAAKIRRTGETCAEGEDKPAVPVLGSSLAIGTFLAVSTNVRYQFIAGAVEQRMFDTMALPGLSRLGSTF--VRSANLYLGSLTIVDWLRFVGLQ 226
            +TK+ IE   G  ++  AEY+KR + F +EL+FV AD +  L A+F  VWL  PTV++   K  +  + G +  +  SCP NAFQ V   G    S+S  QR  A++    KLF VG GA+L G GL   L Y++ A  +   +     ED   VP+L +S A G ++AVS+N+RYQ +AG +EQRM + +       LG+    VR+ N +LGSL  VD+ R+VG+Q
Sbjct:  165 LTKVGIECGVGIFTKTAAEYEKRKENFLKELDFVLADVIMALVADFMLVWLPAPTVSL---KPPLAVSAGPIAKFFYSCPDNAFQVVALSG---TSYSFLQRVGAILRNGSKLFGVGTGASLIGTGLTNALIYSRKAFDK---DFAGVAED---VPILSTSAAYGVYMAVSSNLRYQILAGIIEQRMLEPLLHNQKLALGALCFAVRTGNTFLGSLMWVDYARWVGVQ 380          
BLAST of mRNA_H-elongata_contig67275.14336.1 vs. uniprot
Match: A0A251VLI5_HELAN (Uncharacterized protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VLI5_HELAN)

HSP 1 Score: 145 bits (365), Expect = 5.000e-38
Identity = 91/229 (39.74%), Postives = 132/229 (57.64%), Query Frame = 0
Query:    1 MTKLAIEIITGTVSQVVAEYQKRGKRFSQELEFVFADTLTCLFANFAAVWLSCPTVAVNASKKGVVKAGGALQHWLASCPSNAFQKVVTEGGVSKSFSMSQRGAALVIPMPKLFVVGFGATLFGYGLVAGLEYAQAAKIRRTGETCAEGEDKPAVPVLGSSLAIGTFLAVSTNVRYQFIAGAVEQRMFDTMALPGLSRLGSTF--VRSANLYLGSLTIVDWLRFVGLQH 227
            MTK+AIE   G  ++  AE +KR + FS+EL+FV AD +  L A+F  VWL  PTV++ A    V  + G +  + A CP NAFQ  +       S+S+ QR  A+     KLF VG GA+L G G+   L  A+ A      +T A   D+  +P+L +S+A G ++AVS+N+RYQ IAG +EQRM + +       L +    VR+ N +LGSL  VD+ R++G+Q 
Sbjct:  156 MTKVAIECGVGIFTKSAAELEKRRENFSKELDFVTADVIMALIADFMLVWLPAPTVSLRAP---VAVSAGRVAKFFAGCPDNAFQVALA----GTSYSLLQRIGAIARNGAKLFGVGTGASLIGTGITNLLINARKA----VDKTFAAEADEEDIPILSTSVAYGVYMAVSSNLRYQVIAGVIEQRMLEPLLHQHKLILSAICFAVRTGNTFLGSLMWVDYARWIGIQR 373          
BLAST of mRNA_H-elongata_contig67275.14336.1 vs. uniprot
Match: A0A6A4LPZ0_9ERIC (Uncharacterized protein (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4LPZ0_9ERIC)

HSP 1 Score: 145 bits (365), Expect = 6.470e-38
Identity = 91/228 (39.91%), Postives = 135/228 (59.21%), Query Frame = 0
Query:    1 MTKLAIEIITGTVSQVVAEYQKRGKRFSQELEFVFADTLTCLFANFAAVWLSCPTVAVNASKKGVVKAGGALQHWLASCPSNAFQKVVTEGGVSKSFSMSQRGAALVIPMPKLFVVGFGATLFGYGLVAGLEYAQAAKIRRTGETCAEGEDKPAVPVLGSSLAIGTFLAVSTNVRYQFIAGAVEQRMFDTMALPGLSRLGSTF--VRSANLYLGSLTIVDWLRFVGLQ 226
            +TK+AIE   G  ++  AE ++R ++F++EL+FVFAD +  + A+F  VWL  PTV++   +  +  + G L  +   CP NAFQ  +       S+S  QR  A+V    KLF VG GA+L G G+  GL  A+ A I +T     E ED   VP+L +S+A G ++AVS+N+RYQ +AG +EQR  + +       L +T   VR+ N +LGSL  VD+ R+VG+Q
Sbjct:  171 LTKVAIECGVGIFTKTAAEXERRREKFTKELDFVFADVVMAIIADFMLVWLPAPTVSL---RPALAVSAGPLAKFFYGCPDNAFQVALA----GTSYSFLQRVGAIVRNGAKLFAVGTGASLVGTGITNGLINARKA-IDKT--FAGEAED---VPILSTSVAYGVYMAVSSNLRYQVLAGVIEQRXLEPLLHQHKIWLSATCFAVRTGNTFLGSLMWVDYARWVGIQ 385          
BLAST of mRNA_H-elongata_contig67275.14336.1 vs. uniprot
Match: A0A6P5H2P0_ANACO (protein RETICULATA-RELATED 4, chloroplastic-like n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5H2P0_ANACO)

HSP 1 Score: 144 bits (362), Expect = 1.170e-37
Identity = 89/228 (39.04%), Postives = 135/228 (59.21%), Query Frame = 0
Query:    1 MTKLAIEIITGTVSQVVAEYQKRGKRFSQELEFVFADTLTCLFANFAAVWLSCPTVAVNASKKGVVKAGGALQHWLASCPSNAFQKVVTEGGVSKSFSMSQRGAALVIPMPKLFVVGFGATLFGYGLVAGLEYAQAAKIRRTGETCAEGEDKPAVPVLGSSLAIGTFLAVSTNVRYQFIAGAVEQRMFDTMALPGLSRLGSTF--VRSANLYLGSLTIVDWLRFVGLQ 226
            +TK+AIE   G  ++  AE+++R  +F +EL+FVFAD +  + A+F  VWL  PTV++   K  +  + G +  +  SCP NAFQ  +       S+S+ QR  A+V    KLFVVG GA+L G G+   L   + A  +   +  +E ED   VPVL +S+A G ++AVS+N+RYQ +AG +EQRM + +       L +    VR+ N +LGSL  VD+ R++G+Q
Sbjct:  150 LTKVAIECGVGIFTKTAAEWERRRDKFPKELDFVFADVVMAIIADFMLVWLPAPTVSL---KPPLALSAGPIAKFFYSCPDNAFQVALA----GTSYSVLQRVGAIVRNGSKLFVVGTGASLIGTGITNVLINIRKAFDK---DFASEAED---VPVLSTSIAYGVYMAVSSNLRYQILAGIIEQRMLEPLLHNRKLALSAMCFAVRTGNTFLGSLMWVDYARWIGIQ 364          
BLAST of mRNA_H-elongata_contig67275.14336.1 vs. uniprot
Match: UPI0002C3678E (uncharacterized protein LOC101299328 n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0002C3678E)

HSP 1 Score: 141 bits (355), Expect = 1.620e-37
Identity = 86/228 (37.72%), Postives = 135/228 (59.21%), Query Frame = 0
Query:    1 MTKLAIEIITGTVSQVVAEYQKRGKRFSQELEFVFADTLTCLFANFAAVWLSCPTVAVNASKKGVVKAGGALQHWLASCPSNAFQKVVTEGGVSKSFSMSQRGAALVIPMPKLFVVGFGATLFGYGLVAGLEYAQAAKIRRTGETCAEGEDKPAVPVLGSSLAIGTFLAVSTNVRYQFIAGAVEQRMFDTMALPGLSRLGSTF--VRSANLYLGSLTIVDWLRFVGLQ 226
            +TK+ IE   G  ++  AE ++R ++F++EL+FVFAD +  + A+F  VWL  PTV++   +K +V + G +  +   CP NAFQ  ++      S+S+ QR  A++    KLFVVG GA+L G G+   L  A+ A  +       E ED   VP+L +S A G ++AVS+N+RYQ +AG +EQR+ + +       L +    VR+ N +LGSL  VD+ R++G+Q
Sbjct:   63 LTKVGIECGVGIFTKTAAELERRREKFTKELDFVFADVVMAIIADFMLVWLPAPTVSL---RKPLVVSAGRVAKFFYGCPDNAFQVALS----GTSYSLLQRIGAILRNGAKLFVVGTGASLVGTGVTNALIAARKALDK---SFAGEAED---VPILSTSAAYGVYMAVSSNLRYQVLAGIIEQRILEPLLHQHKLALSAICFAVRTGNTFLGSLMWVDYARWIGIQ 277          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67275.14336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LAU0_9PHAE4.020e-10366.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZL4_ECTSI1.210e-10066.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CF64_9STRA1.080e-5648.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XYV0_HETAK1.420e-4141.41Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1EMP3_HEMAN8.640e-3938.86Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A833R1V6_9POAL1.520e-3840.35Protein RETICULATA-RELATED 4 n=1 Tax=Carex littled... [more]
A0A251VLI5_HELAN5.000e-3839.74Uncharacterized protein n=1 Tax=Helianthus annuus ... [more]
A0A6A4LPZ0_9ERIC6.470e-3839.91Uncharacterized protein (Fragment) n=1 Tax=Rhodode... [more]
A0A6P5H2P0_ANACO1.170e-3739.04protein RETICULATA-RELATED 4, chloroplastic-like n... [more]
UPI0002C3678E1.620e-3737.72uncharacterized protein LOC101299328 n=1 Tax=Fraga... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021825Protein RETICULATA-relatedPFAMPF11891RETICULATA-likecoord: 1..181
e-value: 2.1E-39
score: 135.2
NoneNo IPR availablePANTHERPTHR31620FAMILY NOT NAMEDcoord: 2..226
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 132..227
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..112
NoneNo IPR availableTMHMMTMhelixcoord: 113..131
NoneNo IPR availableTMHMMTMhelixcoord: 31..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67275contigH-elongata_contig67275:467..1620 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67275.14336.1mRNA_H-elongata_contig67275.14336.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67275 467..1650 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67275.14336.1 ID=prot_H-elongata_contig67275.14336.1|Name=mRNA_H-elongata_contig67275.14336.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=228bp
MTKLAIEIITGTVSQVVAEYQKRGKRFSQELEFVFADTLTCLFANFAAVW
LSCPTVAVNASKKGVVKAGGALQHWLASCPSNAFQKVVTEGGVSKSFSMS
QRGAALVIPMPKLFVVGFGATLFGYGLVAGLEYAQAAKIRRTGETCAEGE
DKPAVPVLGSSLAIGTFLAVSTNVRYQFIAGAVEQRMFDTMALPGLSRLG
STFVRSANLYLGSLTIVDWLRFVGLQH*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021825RETICULATA-related