prot_H-elongata_contig67249.14333.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67249.14333.1
Unique Nameprot_H-elongata_contig67249.14333.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length150
Homology
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BLAST of mRNA_H-elongata_contig67249.14333.1 vs. uniprot
Match: D7FMF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF5_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 7.790e-9
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 0 
Query:  120 IRILLREVEVHSWPPNWRHEVQCTRVRVTVI 150
            IR++LREVEVH+WPPNWRHEVQC  VRVTVI
Sbjct: 4070 IRLVLREVEVHAWPPNWRHEVQCPGVRVTVI 4100
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67249.14333.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMF5_ECTSI7.790e-983.87FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67249contigH-elongata_contig67249:610..1578 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67249.14333.1mRNA_H-elongata_contig67249.14333.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67249 609..1578 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67249.14333.1 ID=prot_H-elongata_contig67249.14333.1|Name=mRNA_H-elongata_contig67249.14333.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp
QTPPLQSTLTSPSPSPSPMVLSSARWGKESNESDDGRGRRSPAAMKVWAS
FSGRDTRAGYGAENGASGVDGGVLSRQGRQRRDRRQLQQQQQAGFGMNGS
GKRDAEGAGSSGSGYPTKKIRILLREVEVHSWPPNWRHEVQCTRVRVTVI
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