prot_H-elongata_contig6714.14322.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6714.14322.1
Unique Nameprot_H-elongata_contig6714.14322.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length591
Homology
BLAST of mRNA_H-elongata_contig6714.14322.1 vs. uniprot
Match: D7G2W7_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W7_ECTSI)

HSP 1 Score: 516 bits (1329), Expect = 8.260e-175
Identity = 302/546 (55.31%), Postives = 378/546 (69.23%), Query Frame = 0
Query:   39 DEGMVYSITVDTGVYDIGLNMGICNSMAIFGGVDVITAAVRTVSLKFNTYNGQQQGLFSSVDITARFSLGGEVQIEPQVQVFAMQNFFSGSSTVLGRAVAIFVFAIVLVIYVVKDIRYLVRELMDGRRKLKISLRRIPITTATIVRLAGDVAFVGCLVLWIKTAVFANNFKLAPNLSFSDPSEQVRAFSEDLALVASDRWKLDALAVAGSMIGLARLFLMLRFHPRLSLVTDVLASSAVHLVHFFIMFFMVIAVYSNLCWIIFGPSSDMFASWTLSFVTMTRVALGEFDSIYPGMVEIDSTAAFVIIATYQTLQFVLLLNIVVSVLLDAFQMVQNKNATQTTDTLKQTVMTTIGRWRICVETI-------CSRTYLRFSSSSSVTQGNRGGQAWSINNPINQSVKSGCREFRGGF--TSSTLAPSSIAGPTAAGELCAPSRPSGGVLRPSSARVRPSSCTLPDGALRELATAEQVEQQIINKVNNKGKRKNAGMTRAERIAASHRHYDMRTAVELLRRSPLPEDVLWRKMRQIVGTRLGWTPSKRG 575
            D+G+VYSIT D GV++ GLN  +C  +AI GG DV+T AVR+VSL+FNTYNGQ  GLFS VDITA F+LGGEV++   V+VF+M  FF  S  ++GRA+A+F F ++LVIY+ KD+    RE+ DGR +L +SLR +P+TTAT + L GD  F+  LVLW+  AV A  F+L P LS+++ SEQVRAFSE+LALVA +RWK DA AVAGS+ GL RLF+MLRFHPRLSLVTDVL +SAVHLVHFFIMFFMV+ VYSNL W+IFGPSS +FA+WT SFVTMTR+ALGEFD+IYP MVEID  AAF+II TYQTLQ +LLLNIV+S+LLDAFQMVQ +N+    DTL QTVMTT+GRWRI +  +       C     R S   S    + G     + NP++   + G R+ R     T+ T   +S A   AA  +  P  P G  +  SS+R  P    LP    R++++          K    G  K  G+TR +R+A SHRHYD+RTAVE+LRRSPLPE  +WRKMRQI+G RLGW     G
Sbjct:   23 DQGLVYSITTDIGVFNSGLNFNLCGMLAILGGPDVMTDAVRSVSLRFNTYNGQCDGLFSFVDITALFTLGGEVKMVTSVEVFSMPFFFGSSPAIVGRAIAMFAFGLMLVIYIGKDVLRAWREVRDGRHRLSMSLRHVPVTTATALNLVGDCVFLWNLVLWVNVAVTAAKFELIPTLSYNNASEQVRAFSEELALVALERWKRDAAAVAGSIFGLTRLFIMLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWTKSFVTMTRIALGEFDNIYPLMVEIDGAAAFMIIVTYQTLQCILLLNIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLGRWRIRLTHVGFALVGRCPSVTRRSSPRGSSVGDDAGTTV--VKNPMHD--RHGGRKLRQRHQHTAPTAGGTSAAAVAAAAGV--PVAPPG--ITGSSSRGVP---LLPSSDKRKVSS----------KNRGGGATKRGGLTRGQRLAMSHRHYDLRTAVEVLRRSPLPEAAVWRKMRQIIGARLGWVSEGAG 547          
BLAST of mRNA_H-elongata_contig6714.14322.1 vs. uniprot
Match: A0A6H5KPV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV8_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.610e-25
Identity = 97/273 (35.53%), Postives = 137/273 (50.18%), Query Frame = 0
Query:  333 MVEIDSTAAFVIIATYQTLQFVLLLNIVVSVLLDAFQMVQNKNATQTTDTLKQTVMTTIGRWRICVETICSRTYLRFS-------------------------------------SSSSVTQGNRGGQAWS--INNPINQSVKSGCREFRGGFTSSTLAPSSIAGPTAAGELCAPSRPSGGVLRPSSARVRPSSCTLPDGALRELATAEQVEQQIINKVNNKGKRKNAGMTRAERIAASHRHYDMRTAVELLRRSPLPEDVLWRKMRQIVGTR 566
            MV+ID  AAF+II TYQTLQ +LLLNIV+S+LLDAFQMVQ +++    DTL QTVMTT+GRWRI +      T++ F+                                     SS +    +RG  A +  + NP++   + G  + R     +                  P  P G  +  SS+R  PS           L T+++  +++ +K    G  +  G+T  +R+A SHRHY++  AVE+LRRSPLPE  +WRKMRQI+G R
Sbjct:    1 MVDIDGGAAFMIIVTYQTLQCILLLNIVISILLDAFQMVQTRDSVVAADTLWQTVMTTLGRWRIRL------THMGFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVHRCSSGTRRSSDRGDDAGTTVVRNPMHD--RHGGWKLRRRHQRTAPTXXXXXXXXXXXVTGVPVAPPG--ITGSSSRGAPS-----------LPTSDK--RKVSSKNRGGGATRRGGLTGGQRLAMSHRHYELHAAVEVLRRSPLPEAAVWRKMRQIIGAR 250          
BLAST of mRNA_H-elongata_contig6714.14322.1 vs. uniprot
Match: D7FTQ6_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ6_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.240e-16
Identity = 44/111 (39.64%), Postives = 76/111 (68.47%), Query Frame = 0
Query:  258 MLRFHPRLSLVTDVLASSAVHLVHFFIMFFMVIAVYSNLCWIIFGPSSDMFASWTLSFVTMTRVALGEFDSIYPGMVEIDSTAAFVIIATYQTLQFVLLLNIVVSVLLDAF 368
            ML FH R+S+VTD L+ ++ HL HF  +FF+VI  ++ L W++ G S+  F++   ++ ++TR++LGE ++ YP +++   T   V++  YQ L  VLLLN+V+++LL+ F
Sbjct:   32 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLETF 142          
BLAST of mRNA_H-elongata_contig6714.14322.1 vs. uniprot
Match: A0A6H5L574_9PHAE (PKD_channel domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L574_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 9.240e-15
Identity = 43/112 (38.39%), Postives = 77/112 (68.75%), Query Frame = 0
Query:  258 MLRFHPRLSLVTDVLASSAVHLVHFFIMFFMVIAVYSNLCWIIFGPSSDMFASWTLSFVTMTRVALGEFDSIYPGMVEIDSTAAFVIIATYQTLQFVLLLNIVVSVLLDAFQ 369
            ML FH R+S+VTD L+ ++ HL HF  +FF+VI  ++ L W++ G S+  F++   ++ ++ R++LGE ++ YP +++   T   V++  YQ L  VLLLN+V+++LL+A++
Sbjct:    1 MLTFHKRMSIVTDTLSRASTHLNHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYR 112          
BLAST of mRNA_H-elongata_contig6714.14322.1 vs. uniprot
Match: A0A383VKQ1_TETOB (PKD_channel domain-containing protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VKQ1_TETOB)

HSP 1 Score: 69.7 bits (169), Expect = 1.320e-8
Identity = 76/324 (23.46%), Postives = 151/324 (46.60%), Query Frame = 0
Query:   79 RTVSLKFNTYNGQQQGLFSSVDITARFSLGGEVQIEPQVQVFAMQNFFSGSSTVLGRAVAIFVFAIVLVIYVVKDIRYLVRELMDGRRKLKISLRRIPITTATIVRLAGDVAFVGCLVLWIKTAVFANNFKLAPNLSFSDP---SEQVRAFSEDLA---LVASDRWK-LDALAVAGSMIG-------------LARLFLMLRFHPRLSLVTDVLASSAVHLVHFFIMFFMVIAVYSNLCWIIFGPSSDMFASWTLSFVTMTRVALGEFDSIYPGMVEI---DSTAAFVIIATYQTLQFVLLLNIVVSVLLDAFQMVQNKNATQT 379
            R ++ +  TYN + + +F+ + +   F  GG +Q+  ++   +++ +   S+ +   A  + +   ++++ +++  R+        R ++   L +   +    +RLA +V  +  L LW     F N+     N+    P   + Q +AF   LA      +  W+ +  L  A S++              +ARL   + F PRL +VT  LA +A  L+H F++   V   Y  + ++IFG S   FA++  S  T   + LGEF  +   +  +    S A  +   +++ L F++LLN ++++++DAF  V+ +   QT
Sbjct: 1057 RGLTARLVTYNAELK-VFADIQVAFDFQAGGSIQVSNRIYTLSLELYDPTSANLARYAFEVLLAGCIVLLSLIELARFAQAARYSWRGRIDKGLGQYLSSIGVWLRLANNVLLLAGLGLWWT---FVNSHAKQFNMDLRYPVYENLQPQAFFLKLAGNGAGLASAWEAITRLEAAISVLNVYHAINGICILLLIARLLRAMDFQPRLGVVTKALALAAPDLLHLFLVAGSVFLCYCMMGFLIFGNSLPWFATFPTSINTCFEMLLGEFADVNRDLRSLGGLQSVAGILFFWSFELLVFLILLNFLLAIIVDAFGEVKEQQKEQT 1376          
BLAST of mRNA_H-elongata_contig6714.14322.1 vs. uniprot
Match: A0A6G0XKT2_9STRA (PKD_channel domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKT2_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.590e-8
Identity = 82/312 (26.28%), Postives = 147/312 (47.12%), Query Frame = 0
Query:   80 TVSLKFNT--YNGQQQGLFSSVDITARFSLGGEVQIEPQVQVFAMQNFFSGSST-VLGRAVAIFVFAIVLVIYVVKDIRYLVRELMDGRRKLKISLRRIPITTATIVRLAGDVAFVGCLVLW------IKTAVFANNFKLAPNLSFSDPSEQVRAFSEDLALVASDRWKLDAL---AVAGSMIGLARLFLMLRFHPRLSLVTDVLASSAVHLVHFFIMFFMVIAVYSNLCWIIFGPSSDMFASWTLSFVTMTRVALGEFDSIYPGMVEIDSTAAFVIIATYQTLQFVLLLNIVVSVLLDAFQMVQNKNATQT 379
            T SL+ NT  ++G+   L   +++ A F  GG +Q +   +      + + S+   L  +VA+     +L I+V         E  D     K+ LR    T    V     VA V    LW      +  A FA+N ++    SFS   +      + +A V + +  + ++   A+A  ++ + R+   LRFHP L+LVT  L +S   LV FF +F + ++ +     ++FG S   F++ + S VT+  +  G+FD   P +  +D   AFV       + F++L N++++++L+AF  V+  +  +T
Sbjct:  223 TASLQINTATFDGELH-LLCLINLDAEFQPGGFLQTQDTTKCIPSDPYGTSSAAWPLDISVAV---CFILTIFV---------EGHDYIHYKKLGLRMSYFTVWRGVTWVALVAIVVFYALWTVLVSSLYDATFASNLRILEAHSFSSGIDNESLLGDIMARVKTMKRVMLSVRLSAMAALVLLMFRVLSSLRFHPHLNLVTATLTASLHSLVPFFCIFLICLSAFVTSGCLLFGESLIQFSTVSRSIVTVVNMLFGQFD--LPAIFSVDYYTAFVWYWCAMIVLFLVLFNMLLAIVLNAFNNVRKASVKRT 519          
BLAST of mRNA_H-elongata_contig6714.14322.1 vs. uniprot
Match: A0A7S2F4U2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F4U2_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.010e-8
Identity = 49/156 (31.41%), Postives = 84/156 (53.85%), Query Frame = 0
Query:  222 QVRAFSEDLALVASDRWKLDALAVAGSMIGLARLFLMLRFHPRLSLVTDVLASSAVHLVHFFIMFFMVIAVYSNLCWIIFGPSSDMFASWTLSFVTMTRVALGEFDSIYPGMVEIDSTAAF-----VIIATYQTLQFVLLLNIVVSVLLDAFQMVQ 372
            Q    S D  L A DR  L+ ++V   ++   RLF  LR  P L+LV+D L  +   L HF ++F + + +Y+ +C+++FG  +DMF +   S + +   A G+ DS  P +      +A      VI+ ++  L  +LL+N+++S++LD F   Q
Sbjct:   91 QKAGMSADAILAAEDR--LNIMSVIFVLVATLRLFKYLRADPHLALVSDTLGRAFQDLSHFGVVFCLALVMYTMMCFLMFGTQNDMFNNPAASVIGLIGTAAGDGDSNTPLLPYTGRASAIDIFKTVIVLSWVILSAILLMNVLLSLVLDNFNQAQ 244          
BLAST of mRNA_H-elongata_contig6714.14322.1 vs. uniprot
Match: A0A7J7Q397_9CHLO (PKD_channel domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q397_9CHLO)

HSP 1 Score: 64.3 bits (155), Expect = 6.090e-7
Identity = 73/321 (22.74%), Postives = 148/321 (46.11%), Query Frame = 0
Query:   79 RTVSLKFNTYNGQQQGLFSSVDITARFSLGGEVQIEPQVQVFAMQNFFSGSSTVLGRAVAIFVFAIVLVIYVVKDIRYLVRELMDGRRKLKISLRRIPITTATIVRLAGDVAFVGCLVLW--------------IKTAVFANNFKLAPNLSFSDPSEQVRAFSEDLALVASDRWKLDAL-AVAGSMIGL--ARLFLMLRFHPRLSLVTDVLASSAVHLVHFFIMFFMVIAVYSNLCWIIFGPSSDMFASWTLSFVTMTRVALGEFDSI---YPGMVEIDSTAAFVIIATYQTLQFVLLLNIVVSVLLDAFQMVQNKNATQT 379
            R ++ +  TYN + + +F+ + +   F  GG +++  ++   +++ +    + +   A  + +   ++++ +++  R+        R +    L +   +    +RL  +V  +  L LW              ++  V+ N    A  L  +D    + +  E +  + S    L+   A+ G  I L  ARL   + F PRL +VT  LA +A  L+HFF++   V   Y  + ++IFG S   FA+   S  T   + LGEF  +      +  + S A  +   +++ L F++LLN ++++++DAF +V+ +   QT
Sbjct: 1042 RGLTARLATYNAELK-VFADIQVAFDFQAGGSIKVSNRIYTLSLELYDPTPANLARYAFEVLLAGCIVLLNIIELSRFAQAARCSWRGRRDKGLGQHLGSAGVWLRLLNNVLLLTGLGLWWMFVNQHAKQFSMELRYPVYVNLQPQAFFLRLADSGAGLASAWEAIVRLESAISVLNVYYAINGICILLLIARLLRAMDFQPRLGVVTKALALAAPDLLHFFLVAGSVFLCYCMMGFLIFGNSLPWFATLPTSINTCFEMLLGEFADVNRDLRALGGLQSVAGVLFFWSFELLVFLILLNFLLAIIVDAFAVVKEQQKEQT 1361          
BLAST of mRNA_H-elongata_contig6714.14322.1 vs. uniprot
Match: A0A8J5X0G5_DIALT (PKD_channel domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X0G5_DIALT)

HSP 1 Score: 63.5 bits (153), Expect = 8.730e-7
Identity = 87/386 (22.54%), Postives = 176/386 (45.60%), Query Frame = 0
Query:    2 FYRTCYKDSGRKENKSEEVSNAIMNDLATIGVNRGYGDEGMVYSITVDTGVYDIGLNMGICN--SMAIFGGVDVITAAVRTVSLKFNTYNGQQQGLFSSVDITARFSLGGEVQIEPQVQVFAMQNFFSGSSTVLGRAVAIFVFAIVLVIYVVKDIRYLVRELMDGRRKLKISLRRIPITTATIVRLAGDVAFVGCLVLWIKTAVFANNFKLAPNLSFS-----DPSEQVRAFSEDLALVASDRWKLDALAVAGSMIGLA---RLFLMLRFHPRLSLVTDVLASSAVHLVHFFIMFFMVIAVYSNLCWIIFGPSSDMFASWTLSFVTMTRVALGEFDSIYPGMVEIDSTAAFVIIATYQTLQFVLLLNIVVSVLLDAFQMVQNKNAT 377
             +  CY  SG  EN S  V + +      +   + +      Y + +D G+Y +  + G+C   +   FG VD  T   + V +++ TYNG  + L++   +   + LGG  +++ +     ++N ++  +    RA    V+ ++L  Y+++   + VR L  G      SL    ++   +V LA     V  +VLW+K AV    +++   +        D  E    F E+L L+ +         +  S++ +    RLF  L FH + SLVT  L  +   L HF ++F +V+ +Y+ + + + G   + + +   +  +M  + + +    +  ++++      V   +Y  L  ++L+N+++++LLDA+  V   + T
Sbjct:  293 LFTRCY--SGAFENSSRLVRSGLAESETYLW--QSFLPSEAAYVMALDLGLYKLPRDQGLCQLETARDFGWVDTGT---KRVQVEWATYNGHFE-LWTLTRLQVSWGLGGNPEVDLETLTAPLRNLYARPADA-ARAAFEGVYVLLLGYYMLQTAWH-VRTLGLG------SL----LSGWGLVDLAAYALAVLNIVLWVKFAVEGAQYRMPDFVEKQGTYAPDSHELWGEFMENLGLLETAEDDFVNFTIVQSVLLMVLTFRLFKFLAFHQQFSLVTATLLRAGASLAHFLVVFAIVLVMYAFVGFNMLGHKLERYNTLGKAINSMCSMLVFDDTVSFADIMDVAPLVGPVFYWSYFILSSLMLINVLLAILLDAYASVSRASRT 658          
BLAST of mRNA_H-elongata_contig6714.14322.1 vs. uniprot
Match: A0A7S0MWE4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MWE4_9CRYP)

HSP 1 Score: 62.4 bits (150), Expect = 1.560e-6
Identity = 48/176 (27.27%), Postives = 91/176 (51.70%), Query Frame = 0
Query:  194 CLVLWIKTAVFANNFKLAPNLSFSDPSEQVRAFSEDLALVASDRWKLDALAVAGSMIGLARLFLMLRFHPRLSLVTDVLASSAVHLVHFFIMFFMVIAVYSNLCWIIFGPSSDMFASWTLSFVTM-TRVALGEFDSIYPGMVEIDSTAAFVIIATYQTLQFVLLLNIVVSVLLDAF 368
            C+ ++++ A       L P+     PS +     E  A +   ++ ++   +   ++ L R F   RF PRL+++   L+ +A+ L+HF IMF  V   Y+ +  I+FG   + F++   S  T+   V +G   + Y  +  +  T AFV   T+  L FV+L+N+++++L+DA+
Sbjct:  354 CVYVYLRIAYLL--LLLNPDNIIKVPSNRYERVLETAAGLVEGQYYINFTNI---VLMLIRCFKYYRFQPRLAIINKTLSIAAIDLLHFVIMFVTVFVAYAVMANILFGTEINNFSTLYRSITTLFIWVLVGGAPTYYAQITHVAPTMAFVFYLTFMLLVFVVLMNLLLAILVDAY 524          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6714.14322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7G2W7_ECTSI8.260e-17555.31Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5KPV8_9PHAE1.610e-2535.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTQ6_ECTSI1.240e-1639.64Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5L574_9PHAE9.240e-1538.39PKD_channel domain-containing protein n=1 Tax=Ecto... [more]
A0A383VKQ1_TETOB1.320e-823.46PKD_channel domain-containing protein n=2 Tax=Tetr... [more]
A0A6G0XKT2_9STRA1.590e-826.28PKD_channel domain-containing protein n=1 Tax=Apha... [more]
A0A7S2F4U2_9STRA2.010e-831.41Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7J7Q397_9CHLO6.090e-722.74PKD_channel domain-containing protein n=1 Tax=Scen... [more]
A0A8J5X0G5_DIALT8.730e-722.54PKD_channel domain-containing protein n=2 Tax=Diac... [more]
A0A7S0MWE4_9CRYP1.560e-627.27Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 250..370
e-value: 2.7E-11
score: 42.8
NoneNo IPR availablePANTHERPTHR10877:SF183POLYCYSTIC KIDNEY DISEASE 1A-RELATEDcoord: 74..369
NoneNo IPR availablePANTHERPTHR10877POLYCYSTIN-RELATEDcoord: 74..369
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 302..339
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 340..365
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 279..301
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..151
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 152..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 200..241
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 366..590
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 260..278
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 242..259
NoneNo IPR availableTMHMMTMhelixcoord: 242..259
NoneNo IPR availableTMHMMTMhelixcoord: 132..151
NoneNo IPR availableTMHMMTMhelixcoord: 182..204
NoneNo IPR availableTMHMMTMhelixcoord: 280..302
NoneNo IPR availableTMHMMTMhelixcoord: 56..78
NoneNo IPR availableTMHMMTMhelixcoord: 343..365

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6714contigH-elongata_contig6714:1261..6404 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6714.14322.1mRNA_H-elongata_contig6714.14322.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6714 320..9503 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6714.14322.1 ID=prot_H-elongata_contig6714.14322.1|Name=mRNA_H-elongata_contig6714.14322.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=591bp
MFYRTCYKDSGRKENKSEEVSNAIMNDLATIGVNRGYGDEGMVYSITVDT
GVYDIGLNMGICNSMAIFGGVDVITAAVRTVSLKFNTYNGQQQGLFSSVD
ITARFSLGGEVQIEPQVQVFAMQNFFSGSSTVLGRAVAIFVFAIVLVIYV
VKDIRYLVRELMDGRRKLKISLRRIPITTATIVRLAGDVAFVGCLVLWIK
TAVFANNFKLAPNLSFSDPSEQVRAFSEDLALVASDRWKLDALAVAGSMI
GLARLFLMLRFHPRLSLVTDVLASSAVHLVHFFIMFFMVIAVYSNLCWII
FGPSSDMFASWTLSFVTMTRVALGEFDSIYPGMVEIDSTAAFVIIATYQT
LQFVLLLNIVVSVLLDAFQMVQNKNATQTTDTLKQTVMTTIGRWRICVET
ICSRTYLRFSSSSSVTQGNRGGQAWSINNPINQSVKSGCREFRGGFTSST
LAPSSIAGPTAAGELCAPSRPSGGVLRPSSARVRPSSCTLPDGALRELAT
AEQVEQQIINKVNNKGKRKNAGMTRAERIAASHRHYDMRTAVELLRRSPL
PEDVLWRKMRQIVGTRLGWTPSKRGEWSWAEGRVVVTMQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013122PKD1_2_channel