prot_H-elongata_contig67110.14321.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67110.14321.1
Unique Nameprot_H-elongata_contig67110.14321.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length358
Homology
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BLAST of mRNA_H-elongata_contig67110.14321.1 vs. uniprot
Match: D8LL69_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL69_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 8.760e-9
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 0 
Query:  201 TSKRSGEVWRVTPCRVTGCTKRPSFGQAGDAKASYCGAHKLKDM 244
            +S  +G+VWRV PC+V GC KRPSFG  G+ KASYCG HKL  M
Sbjct:  236 SSAWAGDVWRVMPCKVDGCKKRPSFGGVGELKASYCGTHKLAGM 279
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67110.14321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LL69_ECTSI8.760e-963.64EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67110contigH-elongata_contig67110:395..2260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67110.14321.1mRNA_H-elongata_contig67110.14321.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67110 395..2260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67110.14321.1 ID=prot_H-elongata_contig67110.14321.1|Name=mRNA_H-elongata_contig67110.14321.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=358bp
QSLLVKELHSLRKKEEQIRDLQLLLLKSMGPSLRATTLLGPPTGAIHSHP
GARQHQTFPGGNSSAVPNTIGSVGAGRDANANHDANGNGNVSVDGVRGSR
TKRRRESAATTAATATPRRGAAMSKGRREDSTMEGERQSPTSPAVMGQRV
PPREGHESGGESAGQDALESHDEAETAGVSSGRDGAEPMHLDLVIGAHGR
TSKRSGEVWRVTPCRVTGCTKRPSFGQAGDAKASYCGAHKLKDMMLVNRR
RRCSKEGCSKQPLYGTDSDRVPLACGTHKAPGYVNVTHRRCAQLGCTTQP
VYGEPPSADGGFCPHFCAGHKKPGMVSQKRTRCATNRCSRRAAYGMPGGE
IQLCAEHK
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