prot_H-elongata_contig6711.14320.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6711.14320.1
Unique Nameprot_H-elongata_contig6711.14320.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length324
Homology
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A6H5JPD9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPD9_9PHAE)

HSP 1 Score: 402 bits (1034), Expect = 2.180e-136
Identity = 207/312 (66.35%), Postives = 256/312 (82.05%), Query Frame = 0
Query:   24 LGVSEGMIRAGSLEAEI-PAARR--------NVR---LNVMDDGVRGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLLQNEHCENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLPTAKYGEMEDMEGESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRRCFDPVEEDEGEEKITEPVPM-VGESL 322
            +G+ E + +AGS EAE  PA RR        NVR   +++ DDGVRG++ASR+ LLLLT+VN+PL+ AGV++L L+W D  VC   H  KW+WWALLSV+R+ L+TPV++VRW++EGQRE+ RNQA+D LSSN+RNSLDIVGLVWFVIGH+WLLQN+ C+NP +SPIYQLCLVYII+ YI ICLPCILLMLLVP XXXXXXXXIR++GMLQGPQR+KGAR++EIEKLP  KY E++DME ++CAIC+VDY  EDELR LPC HAFHK+CVDSWL +NASCPNCR RCF+  E+ EGEEKI +  P  VG++L
Sbjct:  121 IGLGELIQQAGSDEAETQPATRRPVNRATNRNVRHVWMHIADDGVRGLSASRLSLLLLTLVNLPLIAAGVVILILHWQDTDVCDVDHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQGCDNPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRLKGARQDEIEKLPVVKYREVQDMEDDACAICIVDYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFE--EDGEGEEKIADDAPAPVGDNL 430          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A7S2V5V5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5V5_9STRA)

HSP 1 Score: 238 bits (607), Expect = 7.030e-73
Identity = 127/265 (47.92%), Postives = 178/265 (67.17%), Query Frame = 0
Query:   45 RNVRLNVMDDGVRGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQR-EDQRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLL-QNEHCENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLPTAKYGE-MEDMEGESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRRCFDPVEEDE 306
            R VR+NV+   +R +N  ++ +L+  +VN+P +VA + VL+L+WGD   C      +WRWWAL+S +R+A+ T V++V +     R  D R  A   L SNLRN +D +GL+WFV+G++WL  Q+E C+NP  SPIYQLC+  +++ YI ICLPC++      XXXXXXXXX RVL  LQ P R KGA +  I++L   K+   + ++E E+C ICL D+ + D LR+LPC+H FH+SCVD WLL+NASCPNCR    +  EEDE
Sbjct:   79 RRVRMNVLGTSMREVNNRKLVVLVTLLVNIPQIVAAIAVLSLHWGDTFACDPERRQRWRWWALISTVRMAIYTVVMVVLYFFTLHRPRDSREVA---LLSNLRNGVDALGLIWFVVGNMWLFGQSESCDNPGSSPIYQLCVAMLLITYIHICLPCLIXXXXXXXXXXXXXXXXRVLSRLQDPMRGKGANQAAIDRLEAIKFQPGVTEVEEETCPICLTDFVEGDGLRLLPCDHCFHQSCVDEWLLLNASCPNCRSTILEEGEEDE 340          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A7S3XQH4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQH4_HETAK)

HSP 1 Score: 224 bits (572), Expect = 1.230e-68
Identity = 117/264 (44.32%), Postives = 174/264 (65.91%), Query Frame = 0
Query:   45 RNVRLNVMDDGVRGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLL-QNEHCENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLPTAKYG-EMEDMEGESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRRCFDPVEEDE 306
            + VR+NV+ +G+R +N  R+ + L  +VN+P +VA  +VL+L+W DD VC   H  +W+WWA ++  RLA+ T +++  + +  +R     + +  + SN RN +D +GL+WFV+G++WL  Q E C+    SP+YQLC+  ++V Y+ ICLPC++      XXXXXXXXX RVL  LQ P R KGA +  I+KL   KY  ++ ++E  +C ICL +Y   +ELR LPC+H+FHK CVD WLL+NA+CPNCR    D  +E+E
Sbjct:   12 QRVRMNVLQNGIREVNNRRLVVFLTLVVNLPQLVAAAVVLSLHWDDDAVCDADHRERWKWWAAVAAARLAVYTGLLVALYLVLLRRPRDAREVI--VLSNARNGVDALGLIWFVVGNMWLFGQTESCDGAGASPVYQLCVAMLLVTYLHICLPCLIXXXXXXXXXXXXXXXXRVLARLQDPMRGKGANQAAIDKLKIIKYRPDLPEIEEPTCPICLNEYENGEELRSLPCKHSFHKKCVDEWLLVNATCPNCRTTILDEEQEEE 273          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A7S2DZB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DZB6_9STRA)

HSP 1 Score: 217 bits (552), Expect = 9.540e-65
Identity = 115/285 (40.35%), Postives = 180/285 (63.16%), Query Frame = 0
Query:   45 RNVRLNVMDDGVRGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLAL--LTPVIIVRWKLEGQREDQRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLLQNEH------CENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLPTAKYGEMEDMEGE-----SCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRRCFDPV---EEDEGEEKITE 313
            +NVR+NV++D +R +++SR+ +  L + N P +VA ++VL+L+W DD+VC   H +KWR WAL++ IR+ L  +T  +I+       ++D++ + +  +  NLRN LD  GLVWF++G++WL           C  P++SPIY LCL  ++  YI ICLPCI+ +L++P    XXXXXI +L  ++ P+  KGA +  I+KLP  K+ ++ D+E       SC ICL+D+  +DE+RILPC+H FH  C+  WL MN++CP+CR+     V   +E    E + E
Sbjct:   60 QNVRVNVLNDSLREVSSSRIAVSALILFNFPQIVAAIVVLSLHWPDDSVCDAEHRLKWRVWALIATIRMVLHMVTIFLIIGVSRMVTQQDRQTRLL-MILHNLRNLLDAAGLVWFLVGNMWLFGGSDEKVTTVCVRPTQSPIYNLCLAMVVFNYIHICLPCIVAILMIPVLCFXXXXXIHMLRWMRDPEEGKGASEAAIKKLPLVKFRDLSDVESTMSSQLSCPICLMDFGPDDEVRILPCKHYFHDQCIGEWLGMNSTCPSCRKNILKDVPSADEKSSNETVEE 343          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: D7FY42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY42_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 3.330e-58
Identity = 84/120 (70.00%), Postives = 107/120 (89.17%), Query Frame = 0
Query:   49 LNVMDDGVRGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLLQNE 168
            +++ DDGVRGMNASR+GLLLLT+VN+PL+ AGV++LTL+W D  VC   H  KW+WWALLSV+R+ L+TPV++VRW++EGQRE+ RNQA+D LSSN+RNSLDIVGLVWFVIGH+WLLQN+
Sbjct:    1 MHIADDGVRGMNASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQ 120          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A7S1U290_9STRA (Hypothetical protein n=5 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U290_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.500e-53
Identity = 102/284 (35.92%), Postives = 163/284 (57.39%), Query Frame = 0
Query:   33 AGSLEAEIPAARRNVRLNVMDDGVRGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAV-------------DQLSSNLRNSLDIVGLVWFVIGHLWLLQNEHCE-NPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQ---RMKGARKEEIEKLPTAKYG--EMEDMEGESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRR 297
            AG++ A    A R +RLN  ++G R + +SR  LL+   V VP + AG+ VL  NW D   C   H +KWRWWAL+SV+R+A    V+ +   L  +      + V             D+L+   ++ +D++GLVWF+IG+LW+L ++       +S ++ LC+ +I+V YIQICLPC + +  +P         +R +  +Q  +     +GA ++ I+++P  K+   ++   +  +CAICL +YA ED+LR+L C HAFHK C+D WL +N SCP+CR +
Sbjct:   15 AGAVGARQQRAARRLRLNAAEEGWRRILSSRTLLLITMGVYVPQIAAGIGVLATNWNDPNACDLEHLLKWRWWALVSVVRMAAFLLVMTMDHVLVDEERSPLREFVLRTGGEEQLILWHDKLARG-KHLVDVLGLVWFIIGNLWVLSDDDSSPGQGKSALFILCVFFIVVYYIQICLPCAVAVAAIPVLCFCLPCLLRFMVRMQDAEAHAERRGAEEDVIDRIPIRKFASSQLSSDDDATCAICLCEYADEDQLRVLHCGHAFHKDCLDPWLRLNGSCPSCRAK 297          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A835Z0W6_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0W6_9STRA)

HSP 1 Score: 184 bits (468), Expect = 6.120e-53
Identity = 104/256 (40.62%), Postives = 145/256 (56.64%), Query Frame = 0
Query:   66 LLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLL--QNEHCENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLPTAKYGEMEDMEGE------------------------SCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCR 295
            ++L  +VN+P ++ G  VL  +W DD  C   H  +WR W++L +  +A  T +    W+    R D     V    +  +N+L+ +GL+WFV G+LWL   Q+E C++ S S IYQLCLV I+V+Y+QICLPC+L +L+VP   XXXXXX RVL     P   +GA +  I+ LP  KYG+                               +C ICL DYA  DELR LPC HA H++C+DSWL ++A+CPNCR
Sbjct:    1 MILTAIVNIPQIIGGAFVLAAHWRDDAACDAEHRARWRVWSVLELAIIAGHTAIRAATWRAGEARAD-----VSHALATAKNALEALGLIWFVAGNLWLFGGQDEGCQDASSSAIYQLCLVLIVVLYVQICLPCLLAVLMVPVLCXXXXXXXRVLSYFHDPMAGRGASQCAIDALPIVKYGDTSAXXXXXXXXXXXXXXXXXGALPTGAALETACPICLNDYAVGDELRQLPCAHALHRACLDSWLAISATCPNCR 251          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A8K1CPU5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPU5_PYTOL)

HSP 1 Score: 182 bits (461), Expect = 1.510e-51
Identity = 109/297 (36.70%), Postives = 161/297 (54.21%), Query Frame = 0
Query:   12 GPINDDLGRLDELGVSEGMIRAGSLEAEIPAARRNVRLNVMDDGV---RGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQRED---QRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLLQN-EHCENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLPTAKYGE-MEDMEGESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRRCFD 300
            GP+   +   D     E   R  + +  +      VRLNV++  V   R    SR+ + +LT+VNVP ++A  ++L L W + T+C          W LL  I L+L   +  V + L G R +   Q  +      SN++  LD+ GL WF++G++W++ +   C++ S    YQL +  I++ Y +I LPCILL+ L+P         IR+L  LQ P R KGA KE I +L T K+   M   E  SC ICL DY  + ELR+LPCEH FHK CVD WL++N++CP CR+  ++
Sbjct:   13 GPMASTMRPADRTRSPESSQRLLARDPTLNEEAHAVRLNVLNSSVQEARDARNSRLIMWVLTVVNVPQILAAAVILALKWTESTLCYRIQI-----WVLLHTIHLSLTLALEWVMYYLNGGRTNRVLQMRERYMSYLSNVKYGLDLAGLFWFLVGNMWVISDGARCDDGSTM--YQLAMWMIVISYAKIFLPCILLLALLPVICFCLPCVIRILSRLQDPMRGKGATKEAINRLSTRKFAAAMFPPEDSSCCICLNDYEPQQELRVLPCEHHFHKECVDEWLIVNSTCPTCRKSIYE 302          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A4D9DBP5_9STRA (RING-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBP5_9STRA)

HSP 1 Score: 175 bits (444), Expect = 9.200e-48
Identity = 94/262 (35.88%), Postives = 147/262 (56.11%), Query Frame = 0
Query:   71 MVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLLQN--EHCENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLP-------------TAKYGEME----------------------DMEGESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCR 295
            +VN+P ++A V++L+  W  DT C+ S   KW+ +AL++ +R+ L    +   ++L G+        + +  S+ RN LD  GL+WFV+G++WL     E C +P+ SP+Y LC+ ++ + Y Q+CLPC+++++++P    XXXX IR+L  +Q P R KGA    I KLP             TA  G +E                      +    SCA+C+ +YA ++++R+LPC H FH SCVD WL +NASCP CR
Sbjct:   75 VVNIPQIIAAVVILSKYW-HDTTCEPSETTKWKTYALIAALRMFLYVSSVSALYRLNGRMP--ATTRLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEICPHPNRSPVYSLCVAFVFINYAQLCLPCVVVIIMLPVLCFXXXXLIRILARIQDPMRGKGATPSMINKLPMMKSRQIQAEKAATASAGSLEGQAAPPASQGGEQDTQVSVTGVESNSTSCAVCISEYAPDEDVRLLPCAHYFHASCVDEWLKVNASCPTCR 333          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A662XM18_9STRA (RING-type domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XM18_9STRA)

HSP 1 Score: 172 bits (436), Expect = 2.100e-47
Identity = 104/286 (36.36%), Postives = 152/286 (53.15%), Query Frame = 0
Query:   41 PAARRNVRLNVMDDGV---RGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAVDQLS---SNLRNSLDIVGLVWFVIGHLWLLQN-EHCENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLPTAKYG-EMEDMEGESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRRCFDPVEEDEGEEKITEPVPMV 318
            P     VRLNV++  V   R    SR+ +  +++VNVP +VA  +VL LNW  +T+C          W LL    LA+   +  + + L G R +   +  +Q     S L+  LD+ GL WF++G++W++ +   C++ S    YQL L  I++ Y +I LPC+LL+ L+P         IR+L  LQ P R KGA KE I++L +  +   M   E   C ICL DY     LR+LPC+H FHK CVD WLL+N++CP CR+  FD   +       T    M+
Sbjct:   76 PDEAHAVRLNVLNSSVQEARDARNSRLIMGAISLVNVPQIVAACVVLALNWKSETLCYRIQV-----WVLLHTAHLAITLALEWMLFYLNGARSNSALRLREQYMAPLSQLKYGLDLAGLFWFLVGNMWVISDGARCDDGSAM--YQLALWMIVISYAKIFLPCLLLLALLPVLCFCLPCVIRLLSRLQDPMRGKGANKEAIDRLESKTFTTNMFPPEDACCCICLNDYEPAQALRVLPCDHHFHKDCVDEWLLVNSTCPTCRKSIFDTASDGSSNAPATSEEDML 354          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPD9_9PHAE2.180e-13666.35RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2V5V5_9STRA7.030e-7347.92Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XQH4_HETAK1.230e-6844.32Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2DZB6_9STRA9.540e-6540.35Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
D7FY42_ECTSI3.330e-5870.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1U290_9STRA2.500e-5335.92Hypothetical protein n=5 Tax=Phaeomonas parva TaxI... [more]
A0A835Z0W6_9STRA6.120e-5340.63RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A8K1CPU5_PYTOL1.510e-5136.70Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9DBP5_9STRA9.200e-4835.88RING-type domain-containing protein n=1 Tax=Nannoc... [more]
A0A662XM18_9STRA2.100e-4736.36RING-type domain-containing protein n=2 Tax=Nothop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 254..294
e-value: 4.1E-7
score: 39.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 253..295
e-value: 4.2E-13
score: 49.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 254..295
score: 12.725
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 229..302
e-value: 5.6E-21
score: 75.5
NoneNo IPR availablePANTHERPTHR46225FAMILY NOT NAMEDcoord: 131..296
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 85..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..218
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 166..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..126
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 219..323
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..165
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 127..146
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 234..301
NoneNo IPR availableTMHMMTMhelixcoord: 65..87
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 145..164
NoneNo IPR availableTMHMMTMhelixcoord: 184..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6711contigH-elongata_contig6711:2764..6092 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6711.14320.1mRNA_H-elongata_contig6711.14320.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6711 1169..6167 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6711.14320.1 ID=prot_H-elongata_contig6711.14320.1|Name=mRNA_H-elongata_contig6711.14320.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp
MNDSSSDLPDNGPINDDLGRLDELGVSEGMIRAGSLEAEIPAARRNVRLN
VMDDGVRGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGV
KWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAVDQLSSNLRNSLD
IVGLVWFVIGHLWLLQNEHCENPSESPIYQLCLVYIIVMYIQICLPCILL
MLLVPVICFCLPCVIRVLGMLQGPQRMKGARKEEIEKLPTAKYGEMEDME
GESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRRCFD
PVEEDEGEEKITEPVPMVGESLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD