mRNA_H-elongata_contig11855.1431.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11855.1431.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 602 bits (1552), Expect = 9.060e-189 Identity = 320/716 (44.69%), Postives = 446/716 (62.29%), Query Frame = 1
Query: 271 LDSITSSSSGKRKSSLLINSTXXXXXXXXXXXXXXLAMLGGLSLLFEMNDTTFIENKADVFGGAVFISATGEGPTFTKATFQSNFAEMGGAIFITGS-----SISLADYVSATFKECVFIDNRAMETGGAMMIDTGTAAITSTMFRSNEARQGGALMLFAPTTMDVCNLEDNISEPDGGQAIMVFESKFEMSNCTFRNNVYDCGDGTFYNETGVGSRWEALCSGCDD-CTNCTVENELNVSTCTPELDHTKSKGGYKSTLMTLSIDEGYWRATNYTTNILACYNHDACKGGLTGSNDFCTEGYTGPYCSVCTDKHIKGPGFTCAECSKRVWGLATAGIATILVIVITSGITKYIVSADMWADR-GLMARWLRRVPLQSVKLIIVAWQILIQFTSVANVTYPDVYQSFLDIVDVLNFDISWIISAGCYVVMDFHGKLLVFTLGPILIIFSLIGTFNYAGRRHRNSLESLEIIRHKHVSILIGVLFYVYSSTSSVVLQTFHCEFLDDGKYYLRADYTIECDGQKHRVLMIYAGFMTILYPLGIPAFFAYVLFQNRHELMDD-AGRNYTISVTSISDLWKPYKPTRFYYEVIECGRRIVPTGVILLVDDDSAAQIAVMLNLTFVFTVISEGLAPYKSKTDAWVCRLGHAVVFSSMYYALLLKVDSSNDTRKSQSAFEIVLIITHLVMVFTVIVEATVIGYSLKKGQVEDPSPRFWPSKM 2394
+ S ++ S + S+L++N T LA+LGGL++ + +FI N A+V GGAVF+S TG GP FT A F SN A++GGA+ GS + ++ TF C FIDNRA TGGA+ G A ++ F+ N A GG L L ++D C+ DNIS+ GG A+ S + N TF NV+DC G + + G+ +EA C GC+ C C E + TCT ++H S GG TL L ++ GYWRA+ + + ACYN DAC GG+TG +C +GY GPYC+VC+D + F C CS +A A + ++V+ + + Y +S + R G++AR + +PLQSVK++IVAWQIL QFTSVANVTYPDVY+ FLD +DV NFD+SW++SAGC +DFH +LL T+ P++ + L GT+ A +R ESL++I +KHVS+++ + F +YSS S+ + + F CE L+DG YLRADYTI+CD KH+ +YAGFM ++Y +GIPA +A++LF++RH L D A R T TS SDLWKPYKP+ FYYEVIECGRR++ GV++ + ++AAQIA+ L + F F ++SEGLAP+ SK DAW+ R GH VVF SMY ALLLKVD S + SQ +EIVL+ H M+ V+ E V+ +SLK Q ++P+ RF K+
Sbjct: 540 IGSFSTDSVSNQGSTLVMNGTTAFVNNTCGANGGALALLGGLAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSGNLKENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFFEPPV-PPTCTDVMEHITSAGG-TVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEPTTRFRHGKL 1253
BLAST of mRNA_H-elongata_contig11855.1431.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 570 bits (1468), Expect = 3.870e-179 Identity = 306/715 (42.80%), Postives = 438/715 (61.26%), Query Frame = 1
Query: 376 LAMLGGLSLLFEMNDTTFIENKADVFGGAVFISATGEGPTFTKATFQSNFAEMGGAIFITGSSISLA----DYVSATFKECVFIDNRAMETGGAMMIDTGTAAITSTMFRSNEARQGGALMLFAPTTMDVCNLEDNISEPDGGQAIMVFESKFEMSNCTFRNNVYDCGDGTFYNETGVGSRWEALCSGCDDCTNCTVENELNVSTCTPELDHTKSKGGYKSTLMTLSIDEGYWRATNYTTNILACYNHDACKGGLTGSNDFCTEGYTGPYCSVCTDKHIKGPGFTCAECSKRVWGLATAGIATILVIVITSGITKYIV-SADMWADRGLMARWLRRVPLQSVKLIIVAWQILIQFTSVANVTYPDVYQSFLDIVDVLNFDISWIISAGCYVVMDFHGKLLVFTLGPILIIFSLIGTFNYAGRRHRNSLESLEIIRHKHVSILIGVLFYVYSSTSSVVLQTFHCEFLDDGKYYLRADYTIECDGQKHRVLMIYAGFMTILYPLGIPAFFAYVLFQNRHELMDDA-GRNYTISVTSISDLWKPYKPTRFYYEVIECGRRIVPTGVILLVDDDSAAQIAVMLNLTFVFTVISEGLAPYKSKTDAWVCRLGHAVVFSSMYYALLLKVDSSNDTRKSQSAFEIVLIITHLVMVFTVIVEATVIGYSLKKGQVEDPSPRFWPSKMLIP-----TLSASVASLVTPESTSCDELNVARVQPI 2487
LA+LGGLS+ +T+F++N A++ GGAV++S T GPTF+ F SN A++GGA+ GS + TF C F NRA TGGA+ +G T+FR N+A GGAL L ++ C+ +N+S+ G A+ E+SN TF NV++C TF N T G + CSGC + V+ + V C+ + H++S GG TL TLSID GYWRATN +T +LACYN DAC GG+TG+ ++C EGY GPYC++C+D + GFTC++C R G+ A ++ + + Y+ D + R +PLQ++K+++VAWQI+ QFTS ANVTYPDVYQ FL+ +DV NFDISW++SAGC + +DFH +LL+ T+GPI+ + L T+ R +R + +L+++ +HVS+++ ++F VYS SSVV QTF C+ L+ G YLRADY IECD KH+ +YAGFM +LYP+GIPAF+ +L ++R L D GR V SIS+LW+PY+P+ +YYEVIECGRRI+ TG+++ + ++AAQIA+ L +T VF V+SE L PY D WV R+ HAVVF S+Y ALLLKVD SN+ SQ FE VL+ H M+ V+VE ++G + + ++P+PR + + + A + E D +N A + P+
Sbjct: 339 LALLGGLSISVNTGETSFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYTS-GDALDEACSGCQTTCDGCVQPPV-VPLCSDVIPHSRSDGGLV-TLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDEPAPRVGGDSVTMRFSYTNEMKVGCAGNSSAEDDDDDHMNEAGLTPV 1050
BLAST of mRNA_H-elongata_contig11855.1431.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 581 bits (1497), Expect = 2.560e-177 Identity = 312/706 (44.19%), Postives = 434/706 (61.47%), Query Frame = 1
Query: 310 SSLLINSTXXXXXXXXXXXXXXLAMLGGLSLLFE-MNDTTFIENKADVFGGAVFISATGEGPTFTKATFQSNFAEMGGAI--FITGSSISLADYVS---ATFKECVFIDNRAMETGGAMMIDTGTAAITSTMFRSNEARQGGALMLFAPTTMDVCNLEDNISEPDGGQAIMVFESKFEMSNCTFRNNVYDCGDGTFYNETGVGSRWEALCSGCDD-CTNCTVENELNVSTCTPELDHTKSKGGYKSTLMTLSIDEGYWRATNYTTNILACYNHDACKGGLTGSNDFCTEGYTGPYCSVCTDKHIKGPGFTCAECSKRVWGLATAGIATILVIVITSGITKYIVSADM-WADRGLMARWLRRVPLQSVKLIIVAWQILIQFTSVANVTYPDVYQSFLDIVDVLNFDISWIISAGCYVVMDFHGKLLVFTLGPILIIFSLIGTFNYAGRRHRNSLESLEIIRHKHVSILIGVLFYVYSSTSSVVLQTFHCEFLDDGKYYLRADYTIECDGQKHRVLMIYAGFMTILYPLGIPAFFAYVLFQNRHELM--DDAGRNYTISVTSISDLWKPYKPTRFYYEVIECGRRIVPTGVILLVDDDSAAQIAVMLNLTFVFTVISEGLAPYKSKTDAWVCRLGHAVVFSSMYYALLLKVDSSNDTRKSQSAFEIVLIITHLVMVFTVIVEATVIGYSLKKGQ------VEDPSPRF 2379
S++LIN T + +LG L+ F EN A V GGAVF+S G GP F TF SN A++GGA+ F +G+S +AD TF+ C F+ NRA TGGA+ G T F N A GGAL L +++ C+ +N S+ +GG A+ + N +F N +DC GTF +EA+C+GC C C + L V TCT L+H+ S G + TL TLSI GYWRAT T +LACY+ DAC GG+TG++ +C EGY GPYC++C++ + FTC CS G+A A ++ +V+ + Y+ S + RG++ R R +PLQSVK+++VAWQI+ QFT+VANVTYP VYQ+FL+ ++V NFD+SW++SAGC V +DFH +LL+ T+GPI L+ T+ A R HR + E+LE +RHKHV +++ + F+VYSS S+ + +TF CE L+DGK YL ADY IECD KH+ +YAGFM +LY GIPA ++++LF++R L + AG++ TS SDLWKPYKP+ FYYEV+EC RR++ GV++ + +S+AQIA+ L + F F +ISEGLAPY S+ D W+ R+GH VV +SMY ALLLKVD S + SQ FE VL++ H+VMV + E V+ +L+ + ED PRF
Sbjct: 906 SAILINGTTSFFNNACGGNGGAVTLLGACDLVVNPAASVRFTENAAAVAGGAVFVSGAGAGPAFANTTFTSNSAQVGGAVAVFGSGNSKGVADIEPPNPTTFERCWFVGNRATATGGAIDSAAGHDYFVDTTFEDNAAGTGGALRLAGTASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQTACVGCAFADPLLVPTCTDLLEHSTSSDG-RDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRDQHLQEDRLPRF 1610
BLAST of mRNA_H-elongata_contig11855.1431.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 564 bits (1453), Expect = 5.970e-177 Identity = 304/670 (45.37%), Postives = 415/670 (61.94%), Query Frame = 1
Query: 376 LAMLGGLSLLFEMNDTTFIENKADVFGGAVFISATGEGPTFTKATFQSNFAEMGGAIFITGSSISL--ADYVSA--TFKECVFIDNRAMETGGAMMIDTGTAAITSTMFRSNEARQGGALMLFAPTTMDVCNLEDNISEPDGGQAIMVFESKFEMSNCTFRNNVYDCGDGTFYNETGVGSRWEALCSGCD-DCTNCTVENELNVSTCTPELDHTKSKGGYKSTLMTLSIDEGYWRATNYTTNILACYNHDACKGGLTGSNDFCTEGYTGPYCSVCTDKHIKGPGFTCAECSKRVWGLATAGIATILVIVITSGITKYIVSADMWAD-RGLMARWLRRVPLQSVKLIIVAWQILIQFTSVANVTYPDVYQSFLDIVDVLNFDISWIISAGCYVVMDFHGKLLVFTLGPILIIFSLIGTFNYAGRRHRNSLESLEIIRHKHVSILIGVLFYVYSSTSSVVLQTFHCEFLDDGKYYLRADYTIECDGQKHRVLMIYAGFMTILYPLGIPAFFAYVLFQNRHELM-DDAGRNYTISVTSISDLWKPYKPTRFYYEVIECGRRIVPTGVILLVDDDSAAQIAVMLNLTFVFTVISEGLAPYKSKTDAWVCRLGHAVVFSSMYYALLLKVDSSNDTRKSQSAFEIVLIITHLVMVFTVIVEATVIGYSL---KKGQ 2355
LA+LGGLS+ +T F+ N A V GGA+F+S T GPTF + SN A++GGAI + GS S DY A TF++C F NRA+ TGGA+ G +++F N A GGAL L ++ C+ +N+S+ GG A+ +SN +F NVY C +G F G+ +EA+C GC +C C+ E V C+ L+H+ S GG TL L I+ GYWRAT + N+L CYN DAC GG+TGS +C EGY GPYC+VC+ + G C++CS R +A ++ ++ T + Y VS + RG++ R R VPLQSVK++IVAWQIL QFTSVAN+ +P VYQ FLD +++ NFD+ W++SAGC +DFH +LLV T+ PI+ + L + A R S E L+ + HKHVS+++ + F VY+S S+V+ QTF CE LDD K YLRADY IECD KH +YAGFM +LY +GIPA + LF++ L D+A R + +DLWKPY+P+ FYYEVIEC RR++ GV++ + ++AAQIAV L + VF +ISE LAPY S+ D W+CR+GHAVV SMY ALLLKVD S++ SQ FE +L+ H+ MV V++E + SL K+GQ
Sbjct: 296 LALLGGLSVTIGTENTVFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNPEDYTPAPTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVECEGCSFEEPQLVPKCSDALEHSNSSGG-TVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQ 964
BLAST of mRNA_H-elongata_contig11855.1431.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 558 bits (1438), Expect = 5.010e-170 Identity = 302/701 (43.08%), Postives = 427/701 (60.91%), Query Frame = 1
Query: 316 LLINSTXXXXXXXXXXXXXXLAMLGGLSLLFEMNDTTFIENKADVFGGAVFISATGEGPTFTKATFQSNFAEMGGAIFITGSSISLADYVSATFKECVFIDNRAMETGGAMMIDTGTAAITSTMFRSNEARQGGALMLFAPTTMDVCNLEDNISEPDGGQAIMVFESKFEMSNCTFRNNVYDCGDGTFYNETGVGSRWEALCSGCDD-CTNCTVENELNVSTCTPELDHTKSKGGYKSTLMTLSIDEGYWRATNYTTNILACYNHDACKGGLTGSNDFCTEGYTGPYCSVCTDKHIKGPGFTCAECSKR-VWGLATAGIATILVIVITSGITKYIVSADMWADR--GLMARWLRRVPLQSVKLIIVAWQILIQFTSVANVTYPDVYQSFLDIVDVLNFDISWIISAGCYVVMDFHGKLLVFTLGPILIIFSLIGTFNYAGRRHRNSLESLEIIRHKHVSILIGVLFYVYSSTSSVVLQTFHCEFLDDGKYYLRADYTIECDGQKHRVLMIYAGFMTILYPLGIPAFFAYVLFQNRHELMD-DAGRNYTISVTSISDLWKPYKPTRFYYEVIECGRRIVPTGVILLVDDDSAAQIAVMLNLTFVFTVISEGLAPYKSKTDAWVCRLGHAVVFSSMYYALLLKVDSSNDTRKSQSAFEIVLIITHLVMVFTVIVEATVIGYSLKKGQ--VEDPSPRFWPSKML 2397
L IN T +A+ ++L D +F+ N A V G A+F+S+ GP F I I GS + + TF C FI N+A+ TGGA+ G AI +++F N A GGAL L + C+ +N S+ G A+ ++N +F N +DC GTF N TG +EA+C+GC+ C C CT +DH+ S GG TL TLSID G+WRA+ +T +LACY+ DAC GG+TG++ +C EGY GPYC +C+D + + F C++CS+ G+A A + +L++ + + Y+ S ++ R G++ R +PLQS+K++IV+WQIL QFTSVANVTYPDVYQ LD++DV NFD+SW++SAGC V M+FHG+LLV T+ PI+ + L T+ A R +R E L II +KHV++++ + F+VYSS SS + + F C+ LD K YLRADY+IEC+ +HR + +YAGFM ++Y +GIPA +A +LF++R L D D R V SIS+LW+PYKP FYYEVIEC RR++ GV++ + ++AAQIAV L + F F ++SEGLAPY S+ D W+ R+GH VVF SMY ALLLKVD S++ SQ FE VL+ H+ M+ V+VEA V +SL++ + + SPRF K L
Sbjct: 813 LFINGTTIFSDNSAGGNGGGMALFVDVALNIGTVDVSFLGNSAGVAGXAMFVSSVSIGPRFNXXXXXXXXXXXXXXISIFGSGTDESGDLPTTFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAGTGGALRLAGEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETTCDGCVFAEGSLAPICTEVMDHSTSDGG-NVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSAASPRFRSGKSL 1512
BLAST of mRNA_H-elongata_contig11855.1431.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 568 bits (1463), Expect = 1.170e-169 Identity = 317/705 (44.96%), Postives = 441/705 (62.55%), Query Frame = 1
Query: 304 RKSSLLINSTXXXXXXXXXXXXXXLAMLGG-LSLLFEMNDTTFIENKADVFGGAVFISATGEGPTFTKATFQSNFAEMGGAIFITGSSISLADYVSAT------FKECVFIDNRAMETGGAMMIDTGTAAITSTMFRSNEARQGGALMLFAPTTMDVCNLEDNISEPDGGQAIMVFESKFEMSNCTFRNNVYDCGDGTFYNETGVGSRWEALCSGCD---DCTNCTVENELNVSTCTPELDHTKSKGGYKSTLMTLSIDEGYWRATNYTTNILACYNHDACKGGLTGSNDFCTEGYTGPYCSVCTDKHIKGPGFTCAECSKRVWGLATAGIATILVIVITSGITKYIVSADMW-ADRGLMARWLRRVPLQSVKLIIVAWQILIQFTSVANVTYPDVYQSFLDIVDVLNFDISWIISAGCYVVMDFHGKLLVFTLGPILIIFSLIGTFNYAGRRHRNSLESLEIIRHKHVSILIGVLFYVYSSTSSVVLQTFHCEFLDDGKYYLRADYTIECDGQKHRVLMIYAGFMTILYPLGIPAFFAYVLFQNRHELM-DDAGRNYTISVTSISDLWKPYKPTRFYYEVIECGRRIVPTGVILLVDDDSAAQIAVMLNLTFVFTVISEGLAPYKSKTDAWVCRLGHAVVFSSMYYALLLKVDSSNDTRKSQSAFEIVLIITHLVMVFTVIVEATVIGYSLKKGQVEDPSPRFW 2382
R+S+L IN XXXXXXXXXXXXXXLA+LGG L + F F N A V GGAVF+S GP + F++N A++GGA+ GS +L +Y F C F++N+A TGGA+ G +F GGAL L T++ C+ +N+SE GG A+ S +M N ++R NV+ C G F + G EA C GC D C E L V C ++HT S GG + + L +D+G+WRAT Y ++L CYN +AC G+T S+ C +GY GPYCS+C+D + G F C+ECS G+ A ++ +++ + Y+VS + RG + R R +PLQS K+++V+WQIL QFT+VANVTYPDVYQ FLD + V NFD+SW++SAGC VV+DFH +LL+ T+GPI+ + L T+ A R +R + E+L++I ++HVS+++ + +VYSS SS + QTF CE L DG+ YLRADY I CD KH+ L +YAG M ++Y +GIPA + +LF++R L A R T V S S+LWKPYKP+ FYYEVIECGRR++ GV++ + ++A QIA+ L + F F V+SEGLAPY S+ D W+ R+GHAVVF SMY ALLLKVD SN+ +SQ FE+VL+ H M+ +++E V+ +L G+ + P+ RFW
Sbjct: 1359 RESNLTINXXXXXXXXXXXXXXXXLALLGGGLHVEFGAAGVVFSNNTAAVAGGAVFVSGADVGPVLSDVLFEANVAQVGGAVSTVGSG-NLKEYAGLAPPNPTIFTRCRFVNNQAAATGGAVETAAGQDVFVDCLFXXXXXGTGGALRLAGTATLENCSFVENVSEDGGGAAVSNIGSISKMDNISYRGNVFSCALGMFLDFNASGDPNEAACDGCQTPCDDDGCFEEPPL-VPICALAMEHTGSAGGTNNITL-LRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVGERDGPALRFW 2060
BLAST of mRNA_H-elongata_contig11855.1431.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 543 bits (1400), Expect = 2.370e-165 Identity = 306/705 (43.40%), Postives = 417/705 (59.15%), Query Frame = 1
Query: 307 KSSLLINSTXXXXXXXXXXXXXXLAMLGGLSLLFEMNDTTFIENKADVFGGAVFISATGEGPTFTKATFQSNFAEMGGAIFITGSSIS---LADYVSATFKECVFIDNRAMETGGAMMIDTGTAAITSTMFRSNEARQGGALMLFAPTTMDVCNLEDNISEPDGGQAIMVFESKFEMSNCTFRNNVYDCGDGTF--YNETGVGSRWEALCSGCD-DCTNCTVENELNVSTCTPELDHTKSKGGYKSTLMTLSIDEGYWRATNYTTNILACYNHDACKGGLTGSNDFCTEGYTGPYCSVCTDKHIKGPGFTCAECSKRVWGLATAGIATILVIVITSGITKYIVSADMWADRGLMARWLR-RVPLQSVKLIIVAWQILIQFTSVANVTYPDVYQSFLDIVDVLNFDISWIISAGCYVVMDFHGKLLVFTLGPILIIFSLIGTFNYAGRRHRNSLESLEIIRHKHVSILIGVLFYVYSSTSSVVLQTFHCEFLDDGKYYLRADYTIECDGQKHRVLMIYAGFMTILYPLGIPAFFAYVLFQNRHELMDD-AGRNYTISVTSISDLWKPYKPTRFYYEVIECGRRIVPTGVILLVDDDSAAQIAVMLNLTFVFTVISEGLAPYKSKTDAWVCRLGHAVVFSSMYYALLLKVDSSNDTRKSQSAFEIVLIITHLVMVFTVIVEATVIGYSLKKGQVEDPSPRFWPSKML 2397
+SSL+IN T LA+ SL D +F N A GGAVF+S G GPTF+ +F SNFA++GGA + GS L+ + F C FIDN A +GGA+ G + +++F+ N A GGAL L +S G A+ M+N +F N + CG F Y+ T G+ +EA+C GC C C+ + V TC+ +DH S GG K TL TLSID GYWRAT+ + IL CYN DAC GG+TG+ +C E Y GPYCS+C+D + G++C++C R G+ A +L + + + YI+S + R + L VPLQSVK++IV+WQIL QF S ANV YP VYQ FLD + V FD+ W++SAGC + M FHG+LL T+GPI + L GT+ A R +R + E L II KHV + + + F VYSS SS + +TF C+ L+DGK YLR DY IECD KH+V +YAGFM +LYPLGIP ++ +LF++R L D A R+ + V S S+LW+PYKP+ FYYEVIECGRRI+ TG+++ + ++AAQ+A+ L + F F ++SE ++PY S+ + WV R+GH VV SMY ALLLKVD S++ SQS FE VL+ H M+ +V+VE V+ + ED RF K L
Sbjct: 723 ESSLVINGTTTFFNNTCGENGGSLALFDACSLDINTADVSFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFAQVGGAASVFGSGNDRGMLSPIIPTKFDRCRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGT-FEAVCDGCRVACDGCSFDEPPAVPTCSDVMDHGTSTGG-KVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWTRRLREDLPARFRRGKFL 1425
BLAST of mRNA_H-elongata_contig11855.1431.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 522 bits (1344), Expect = 5.790e-155 Identity = 295/658 (44.83%), Postives = 404/658 (61.40%), Query Frame = 1
Query: 397 SLLFEMNDTTFIENKADVFGGAVFISATGEGPTFTKATFQSNFAEMGGAIFITGSSISLADYVSATF----KECVFIDNRAMETGGAMMIDTGTAAITSTMFRSNEARQGGALMLFAPTTMDVCNLEDNISEPDGGQAIMVFESKFEMSNCTFRNNVYDCGDGTFYNETGVGSRWEALCSGCDDCTN---CTVENELNVSTCTPELDHTKSKGGYKSTLMTLSIDEGYWRATNYTTNILACYNHDACKGGLTGSNDFCTEGYTGPYCSVCTDKHIKGPGFTCAECSKRVWGLATAGIATILVIVITSGITKYIVSADM-WADRGLMARWLRRVPLQSVKLIIVAWQILIQFTSVANVTYPDVYQSFLDIVDVLNFDISWIISAGCYVVMDFHGKLLVFTLGPILIIFSLIGTFNYAGRRHRNSLESLEIIRHKHVSILIGVLFYVYSSTSSVVLQTFHCEFLDDGKYYLRADYTIECDGQKHRVLMIYAGFMTILYPLGIPAFFAYVLFQNRHELM-DDAGRNYTI-SVTSISDLWKPYKPTRFYYEVIECGRRIVPTGVILLVDDDSAAQIAVMLNLTFVFTVISEGLAPYKSKTDAWVCRLGHAVVFSSMYYALLLKVDSSNDTRKSQSAFEIVLIITHLVMVFTVIVEATVIGYS 2340
S +F ++ + F N A GGAV +S GP F + F +N A GGA++ S I F K+C+F DN A TGGA+ G +++F +N A GGAL L + C DN +E +G + E ++ F NV C +G Y ++ G R++ +C GC + +VEN V C +LDHT+S+GG +T+ TL + GYWRATN + N+LACYN DAC GG+T FC GY GPYCSVC++ + FTC EC G+A + + V+ + ++VS +M A RG++ R ++R+PLQS+K+++V WQIL QF+SVANVTYPDVYQ FLD V++LNFD+ WI SAGC V +DFHG+LLV T+GP++ + L T+ A RR S +L+ IRHKH+S+++ + F VYSS S+ V Q+F CE LDD K YLRADY IECD +H+ ++AG M ++YP+GIP F+ Y+L+++R L +DAG+ T V ISDLW PYKP RFYYEVIEC RR+ TGV++ + ++AAQ+AV L + F F V S LAPY SK DA + +GH +VF+SMY ALL KVD S++ SQ F VL+ H MV V+VE VI YS
Sbjct: 1102 STVFNISSSIFESNTAGA-GGAVMLSGVVIGPEFIQINFTANRAPRGGAVYSVSSGIETNGGGDPLFPVGYKDCLFRDNEASVTGGAIETAAGYDFAINSVFEANAAGVGGALRLGGSAILTNCTFIDNTAEDEGPAVSNLGVLDLEGTS-RFSGNVLSCENG-MYLDSVDGDRYQTVCDGCPVNNSDWIVSVENGDRVPICVVQLDHTRSEGG-DTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYS 1755
BLAST of mRNA_H-elongata_contig11855.1431.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 514 bits (1323), Expect = 6.780e-153 Identity = 275/650 (42.31%), Postives = 392/650 (60.31%), Query Frame = 1
Query: 418 DTTFIENKADVFGGAVFISATGEGPTFTKATFQSNFAEMGGAIFITGSSISLADYVS-ATFKECVFIDNRAMETGGAMMIDTGTAAITSTMFRSNEARQGGALMLFAPTTMDVCNLEDNISEPDGGQAIMVFESKFEMSNCTFRNNVYDCGDGTFYNETGVGSR-WEALCSGCD-DCTNCTVENELNVSTCTPELDHTKSKGGYKSTLMTLSIDEGYWRATNYTTNILACYNHDACKGGLTGSNDFCTEGYTGPYCSVCTDKHIKGPGFTCAEC-SKRVWGLATAGIATILVIVITSGITKYIVSAD--MWADRGLMARWLRRVPLQSVKLIIVAWQILIQFTSVANVTYPDVYQSFLDIVDVLNFDISWIISAGCYVVMDFHGKLLVFTLGPILIIFSLIGTFNYAGRRHRNSLESLEIIRHKHVSILIGVLFYVYSSTSSVVLQTFHCEFLDDGKYYLRADYTIECDGQKHRVLMIYAGFMTILYPLGIPAFFAYVLFQNRHELMDDAG-RNYTISVTSISDLWKPYKPTRFYYEVIECGRRIVPTGVILLVDDDSAAQIAVMLNLTFVFTVISEGLAPYKSKTDAWVCRLGHAVVFSSMYYALLLKVDSSNDTRKSQSAFEIVLIITHLVMVFTVIVEATVIGYSLK 2346
D +F+ N A V GGA+F+S GP FT+ F SN AE+GGA+ + G I + + TF C F+DN+ TGGA+ G A ++F N A GGAL L C+ N ++ G A+ + + F N +DC + + +E +CSGC+ C C + L V CT ++H S GG TL LSID GYWRAT + ++LACY+ +AC GG+T ++ +C EGY GPYCSVC++ + + GF C++C K G+ + + ++ + I Y+ S + M G + R R +PLQSVK++I AWQIL QFTS+ANVTYPDVY+ FL ++D+ NFD+ W +S C + MDFH +LLV T+ PI + L T+ A +R ++L ++HKH S+++ + F+VYSS SS++ ++F CE L D K YLR+DY IECD KH+ +YA FM ++Y +GIPA +A +LF++R L D R VTSI+DLW+PY FYYEVIECGRR++ GV++ + ++AAQIAV L + F F V+SE L PYKS D W+ R+GH VVFSSM+ LLLKV+ S++ SQ FEIVL+ H +MV ++VE V+ + L+
Sbjct: 956 DISFVGNSAGVAGGAIFLSGVDTGPIFTEVNFTSNVAEIGGAVSLFGCGIEPSGGDNPTTFDRCRFVDNQGASTGGAIESAAGKDAFNGSIFEGNSAGTGGALRLAGAAYFFNCSFVGNTADEGEGAAVSNIGYISAVESNFFSGNRFDCRSSMYLDFIQQSDDPFEVMCSGCEVTCEGCVFDEGLLVPACTEVMEHATSDGG-NITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTLGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVETVVLFFQLR 1604
BLAST of mRNA_H-elongata_contig11855.1431.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI) HSP 1 Score: 495 bits (1274), Expect = 8.090e-151 Identity = 293/701 (41.80%), Postives = 406/701 (57.92%), Query Frame = 1
Query: 298 GKRKSSLLINSTXXXXXXXXXXXXXXLAMLGGLSLLFEMNDTTFIENKADVFGGAVFISATGEGPTFTKATFQSNFAEMGGAIFITGSSIS--LADYVSATFKECVFIDNRAMETGGAMMIDTGTAAITSTMFRSNEARQGGALMLFA-PTTMDVCNLEDNISEP-DGGQAIMVFESKFEMSNCTFRNNVYDCGDGTF--YNETGVGSRWEALCSGC---DDCTNCTVENELNVSTCTPELDHTKSKGGYKSTLMTLSIDEGYWRATNYTTNILACYNHDACKGGLTGSNDFCTEGYTGPYCSVCTDKHIKGPGFTCAECSKRVWGLATAGIATILVIVITSGITKYIVSADM--WADRGLMARWLRRVPLQSVKLIIVAWQILIQFTSVANVTYPDVYQSFLDIVDVLNFDISWIISAGCYVVMDFHGKLLVFTLGPILIIFSLIGTFNYAGRRHRNSLESLEIIRHKHVSILIGVLFYVYSSTSSVVLQTFHCEFLDDGKYYLRADYTIECDGQKHRVLMIYAGFMTILYPLGIPAFFAYVLFQNRHELMDDAGRNYTISVTSISDLWKPYKPTRFYYEVIECGRRIVPTGVILLVDDDSAAQIAVMLNLTFVFTVISEGLAPYKSKTDAWVCRLGHAVVFSSMYYALLLKVDSSNDTRKSQSAFEIVLIITHLVMVFTVIVEATVIGYSLKKGQVEDP 2367
G +SL++N + + G +SL E D F N A GGA++IS T GPT TF N A GGA+++T S + D TF C F DN A +GGA+ +G +I S+ F SN+A GGAL L ++ C + N + DGG A+ ++ N FR N +C G+F Y E+ G R+EA+C GC DD VEN V TCT L++T+S G S + + ID GYWRAT TT +LACYN DAC GG+TG +C EGY GPYC++CT+ + + F C +CS G+A I + V + + Y+VS + L+ +V +S+K+++V WQIL QF+ VANVTYP +YQ FLD++DVLNFDI W+ISAGC V DFH LL T+GPI+++ L T+ A R+R S E++ + KHVS ++ V F VYSS SS V + F C+ L D YLRADY+I+C KHR L I+A FM +LYP+GIP F+ +L+ R L D + R +IS LW+PY P R+Y EV+ECGRR++ TGV++ + +SAAQIA+ L +TF F VISE LAP+ S D WV R GH ++F +M+ ALLLKVD S++ SQ F +L++T+LV+ + E + ++K + P
Sbjct: 339 GGSLASLVVNGSTAFVDNTCEGSGGAIKTSGAVSLALE--DVVFTGNSAQSRGGALYISNTAVGPTLVGLTFTGNTAHTGGAVYVTASGVDAVFGDGYPTTFAGCYFADNFADLSGGAIDSSSGDDSIESSDFISNKAVIGGALRLAGNDVSIKYCTFDGNAAGTVDGGPAVSNV-GDLDVWNSVFRRNYIECPPGSFVDYYES-EGGRYEAVCDGCPAADDGITMGVENL--VPTCTETLENTRSDGANTS-IEDIRIDPGYWRATTTTTTVLACYNADACLGGITGEAGYCREGYYGPYCAICTENYGRTMAFECTKCSSGE-GVAVGVIFVSALAVGGAALVAYLVSNEREGXXXXXLIVLVKDKVSFRSLKIVVVVWQILTQFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSDEAIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREALKDGSCRQAHPQAKTISALWEPYTPKRYYNEVVECGRRMLLTGVVVFIYPNSAAQIAISLLMTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILVVTNLVLFGAAVAEMVWMWCAVKMEENGSP 1031 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11855.1431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11855.1431.1 >prot_H-elongata_contig11855.1431.1 ID=prot_H-elongata_contig11855.1431.1|Name=mRNA_H-elongata_contig11855.1431.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=803bp MDMGSEASWSGKTVFSGNIAHSEGGGAILIGHSSNVIWSGETTFVNNICGback to top mRNA from alignment at H-elongata_contig11855:2..7609+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11855.1431.1 ID=mRNA_H-elongata_contig11855.1431.1|Name=mRNA_H-elongata_contig11855.1431.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7608bp|location=Sequence derived from alignment at H-elongata_contig11855:2..7609+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11855:2..7609+ >mRNA_H-elongata_contig11855.1431.1 ID=mRNA_H-elongata_contig11855.1431.1|Name=mRNA_H-elongata_contig11855.1431.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4818bp|location=Sequence derived from alignment at H-elongata_contig11855:2..7609+ (Himanthalia elongata Himel1 dioecious)back to top |