prot_H-elongata_contig67018.14309.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67018.14309.1
Unique Nameprot_H-elongata_contig67018.14309.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length66
Homology
BLAST of mRNA_H-elongata_contig67018.14309.1 vs. uniprot
Match: D7FTL8_ECTSI (Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL8_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 1.590e-29
Identity = 51/59 (86.44%), Postives = 54/59 (91.53%), Query Frame = 0
Query:    1 EEEIPGFTDPLRWLRYFPPRGREDMKGFGTAVDWRRSFVTTSVNPYYDSFIRWQFNTLK 59
            E+EI  FTDPL+WL YFPPRGR+DM  FGTAVDWRRSFVTTSVNPYYDSFIRWQFNTLK
Sbjct:  212 EDEIRNFTDPLKWLEYFPPRGRDDMIKFGTAVDWRRSFVTTSVNPYYDSFIRWQFNTLK 270          
BLAST of mRNA_H-elongata_contig67018.14309.1 vs. uniprot
Match: A0A7S2UVZ9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVZ9_9STRA)

HSP 1 Score: 112 bits (281), Expect = 9.400e-28
Identity = 43/59 (72.88%), Postives = 52/59 (88.14%), Query Frame = 0
Query:    1 EEEIPGFTDPLRWLRYFPPRGREDMKGFGTAVDWRRSFVTTSVNPYYDSFIRWQFNTLK 59
            ++EIP F DPL+WL YFPP G +D+KGFGT VDWRRSF+TTS NPYYD+F+RWQFNTL+
Sbjct:   15 QDEIPAFVDPLKWLEYFPPYGMQDLKGFGTGVDWRRSFITTSANPYYDAFVRWQFNTLR 73          
BLAST of mRNA_H-elongata_contig67018.14309.1 vs. uniprot
Match: A0A835YRC2_9STRA (Leucine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRC2_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.150e-27
Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 EEEIPGFTDPLRWLRYFPPRGREDMKGFGTAVDWRRSFVTTSVNPYYDSFIRWQFNTLK 59
            E+EI  FTDPL+WL+YFPP G+ D++ FG AVDWRRSF+TT+VNPYYDSFIRWQFNTLK
Sbjct:  165 EDEISAFTDPLQWLKYFPPHGKADLERFGAAVDWRRSFITTAVNPYYDSFIRWQFNTLK 223          
BLAST of mRNA_H-elongata_contig67018.14309.1 vs. uniprot
Match: UPI0000453172 (leucyl-tRNA synthetase n=1 Tax=Cryptosporidium hominis (strain TU502) TaxID=353151 RepID=UPI0000453172)

HSP 1 Score: 104 bits (260), Expect = 2.130e-26
Identity = 41/60 (68.33%), Postives = 50/60 (83.33%), Query Frame = 0
Query:    1 EEEIPGFTDPLRWLRYFPPRGREDMKGFGTAVDWRRSFVTTSVNPYYDSFIRWQFNTLKV 60
            EEEI  FTDP+ W  YFPP  ++D+K FGTAVDWRRSF+TT +NPYYD+F++WQF TLKV
Sbjct:  157 EEEISKFTDPIYWTEYFPPLTKKDLKNFGTAVDWRRSFITTDINPYYDAFVKWQFRTLKV 216          
BLAST of mRNA_H-elongata_contig67018.14309.1 vs. uniprot
Match: A0A7S3LYW7_9STRA (Leucine--tRNA ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LYW7_9STRA)

HSP 1 Score: 105 bits (262), Expect = 6.260e-25
Identity = 43/57 (75.44%), Postives = 50/57 (87.72%), Query Frame = 0
Query:    2 EEIPGFTDPLRWLRYFPPRGREDMKGFGTAVDWRRSFVTTSVNPYYDSFIRWQFNTL 58
            EEIP F DP++WL YFPP G ED+K FG+A+DWRRSF+TTSV+P YDSFIRWQFNTL
Sbjct:  174 EEIPEFADPMKWLNYFPPLGVEDLKEFGSAIDWRRSFITTSVSPVYDSFIRWQFNTL 230          
BLAST of mRNA_H-elongata_contig67018.14309.1 vs. uniprot
Match: A0A7S0GHA7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GHA7_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 8.490e-25
Identity = 40/58 (68.97%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    2 EEIPGFTDPLRWLRYFPPRGREDMKGFGTAVDWRRSFVTTSVNPYYDSFIRWQFNTLK 59
            E IP F DPL WL YFPPRG   +  FG  VDWRRSF+TT+VNPYYD+FIRWQF TL+
Sbjct:   33 ELIPSFIDPLVWLSYFPPRGVTHLNNFGAGVDWRRSFITTAVNPYYDAFIRWQFETLR 90          
BLAST of mRNA_H-elongata_contig67018.14309.1 vs. uniprot
Match: A0A2P4Z1D2_9CRYT (Leucine--tRNA ligase n=6 Tax=Cryptosporidium TaxID=5806 RepID=A0A2P4Z1D2_9CRYT)

HSP 1 Score: 105 bits (261), Expect = 8.540e-25
Identity = 41/65 (63.08%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    1 EEEIPGFTDPLRWLRYFPPRGREDMKGFGTAVDWRRSFVTTSVNPYYDSFIRWQFNTLKVISNAI 65
            EEEI  FTDP+ W  YFPP  ++D+K FGTAVDWRRSF+TT +NPYYD+F++WQF TLK+  + I
Sbjct:  157 EEEISKFTDPIYWTEYFPPLTKKDLKNFGTAVDWRRSFITTDINPYYDAFVKWQFRTLKIKKDKI 221          
BLAST of mRNA_H-elongata_contig67018.14309.1 vs. uniprot
Match: A0A7R9UHB7_9STRA (Leucine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UHB7_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.960e-24
Identity = 43/59 (72.88%), Postives = 48/59 (81.36%), Query Frame = 0
Query:    1 EEEIPGFTDPLRWLRYFPPRGREDMKGFGTAVDWRRSFVTTSVNPYYDSFIRWQFNTLK 59
            E EIP F DPL+WL+YFPP G  D+K FG A DWRRSF+TTSVNPYYDSFIRWQF  L+
Sbjct:  103 EAEIPEFVDPLKWLQYFPPYGMVDLKAFGVASDWRRSFITTSVNPYYDSFIRWQFAKLR 161          
BLAST of mRNA_H-elongata_contig67018.14309.1 vs. uniprot
Match: A2F0M3_TRIVA (Leucine--tRNA ligase n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2F0M3_TRIVA)

HSP 1 Score: 102 bits (255), Expect = 3.560e-24
Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 0
Query:    1 EEEIPGFTDPLRWLRYFPPRGREDMKGFGTAVDWRRSFVTTSVNPYYDSFIRWQFNTLK 59
            E EIP F DPL+WL YFPP G +DMK FG AVDWRRSF+TT VNPY+D+F++WQF  LK
Sbjct:  155 ENEIPEFVDPLKWLHYFPPYGVKDMKQFGAAVDWRRSFITTDVNPYFDAFVKWQFRILK 213          
BLAST of mRNA_H-elongata_contig67018.14309.1 vs. uniprot
Match: A0A078B9F5_STYLE (Leucine--tRNA ligase n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078B9F5_STYLE)

HSP 1 Score: 103 bits (256), Expect = 4.050e-24
Identity = 40/59 (67.80%), Postives = 48/59 (81.36%), Query Frame = 0
Query:    1 EEEIPGFTDPLRWLRYFPPRGREDMKGFGTAVDWRRSFVTTSVNPYYDSFIRWQFNTLK 59
            EE+IP F DPL WL +FPP G +D+K FG   DWRRSF+TT VNP+YDSF++WQFNTLK
Sbjct:  154 EEDIPKFQDPLHWLHFFPPHGMQDLKDFGLYTDWRRSFITTEVNPFYDSFVQWQFNTLK 212          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67018.14309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTL8_ECTSI1.590e-2986.44Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7S2UVZ9_9STRA9.400e-2872.88Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa... [more]
A0A835YRC2_9STRA3.150e-2776.27Leucine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
UPI00004531722.130e-2668.33leucyl-tRNA synthetase n=1 Tax=Cryptosporidium hom... [more]
A0A7S3LYW7_9STRA6.260e-2575.44Leucine--tRNA ligase n=1 Tax=Spumella elongata Tax... [more]
A0A7S0GHA7_9STRA8.490e-2568.97Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A2P4Z1D2_9CRYT8.540e-2563.08Leucine--tRNA ligase n=6 Tax=Cryptosporidium TaxID... [more]
A0A7R9UHB7_9STRA2.960e-2472.88Leucine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoi... [more]
A2F0M3_TRIVA3.560e-2469.49Leucine--tRNA ligase n=1 Tax=Trichomonas vaginalis... [more]
A0A078B9F5_STYLE4.050e-2467.80Leucine--tRNA ligase n=1 Tax=Stylonychia lemnae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 1..61
e-value: 1.4E-13
score: 52.6
IPR004493Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolicPANTHERPTHR45794Leucyl-tRNA synthetasecoord: 1..59
NoneNo IPR availablePANTHERPTHR45794:SF1LEUCINE--TRNA LIGASE, CYTOPLASMICcoord: 1..59
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 7..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67018contigH-elongata_contig67018:101..298 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67018.14309.1mRNA_H-elongata_contig67018.14309.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67018 101..298 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67018.14309.1 ID=prot_H-elongata_contig67018.14309.1|Name=mRNA_H-elongata_contig67018.14309.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp
EEEIPGFTDPLRWLRYFPPRGREDMKGFGTAVDWRRSFVTTSVNPYYDSF
IRWQFNTLKVISNAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
IPR004493Leu-tRNA-synth_Ia_arc/euk