mRNA_H-elongata_contig67005.14307.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig67005.14307.1
Unique NamemRNA_H-elongata_contig67005.14307.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL)

HSP 1 Score: 265 bits (677), Expect = 1.680e-79
Identity = 159/471 (33.76%), Postives = 253/471 (53.72%), Query Frame = 1
Query:    4 RAIAREMDGKTARGVWQVVERPKGKTVLDTRVVFKRKIDKDGRIEKYKCRHVAQVFMQVKGIHYKKPSSPTPAQARIRMLLGMIVSLGWEARQLDVDMAYLEAEVEEEIYVELPEAYHDSRKQVGQLKKVMYGLVHAGLLW*KAFGIKLEAKGFQRSQADPCVFRRILHGVVVXXXXXXXDDLLVASAMKRDEEQAVRDLCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGVTKTSIIPSVAGEKA-LSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR*VSGGAEMMAGGAISWFSRVQKVTAAASSESVYVALAEMVNELRFLRQVKEFMPLPIDVVIKVHEDNEGTIKMAENRFSSQRTRHVDIKHHIVRDAIEGGVVHVEF 1413
            +A+  E D  +  G W  V+R     V+ T+ VF +K ++ G I ++K R VA  F+Q+ G+ + +  +   +   IR+ L +  + G+   QLDVD A+L A+++E++Y+E PE       +V +L K +YGL  AG  W K     L   GF+   +D C++     G          DD++V    +   ++  + + + F I +LG   + LG  I  D+    L+ +Q  Y++T+ ERF       + +   +   LSK+D P  D +  EM + PYR ++G L + A  TRPDI+FA   L++F +NPGP HW AA + L+YL  TRD GI+YGG       +  +  AD+GT  D  R VSG   MM GG I + ++ Q   A +SSE+ Y+AL+    E+ ++R +   + + I   I+V EDN+G I +A N     RT+H+DI+HH VRD +   V+ + +
Sbjct:   11 KAVKAEFDAHSRNGTWTKVKRQTWMKVIKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGRAGGDTTYICLYV-DDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPV-VFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQSTVALSSSEAEYLALSLCGQEVMWVRTMLHDLGINIKKPIQVWEDNQGAIALAHNAGYHARTKHIDIRHHYVRDLVADSVIKLSY 479          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 265 bits (678), Expect = 3.500e-79
Identity = 163/475 (34.32%), Postives = 249/475 (52.42%), Query Frame = 1
Query:    7 AIAREMDGKTARGVWQVVERPKGKTVLDTRVVFKRKIDKDGRIEKYKCRHVAQVFMQVKGIHYKKPSSPTPAQARIRMLLGMIVSLGWEARQLDVDMAYLEAEVEEEIYVELPEAYHD--SRKQVGQLKKVMYGLVHAGLLW*KAFGIKLEAKGFQRSQADPCVFRRILHGVVVXXXXXXXDDLLVASAMKRDEEQAVRDLCSC-FPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGVTKT-SIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR*VSGGAEMMAGGAISWFSRVQKVTAAASSESVYVALAEMVNELRFLRQVKEFMPLPIDVVIKVHEDNEGTIKMAENRFSSQRTRHVDIKHHIVRDAIEGGVVHVEFGP 1419
            AI  E+      G W++ E+P G  V+ +  VFK K D  G I KYK R VAQ F Q+ G+ Y    +P    + IR+L  +     WE  Q+DV  AYL  ++EEEI+++ P  +      ++V  L K +YGL  AG  W K         GF RS  D  VF R      +       DDL +A A   DE   ++      F + DLG+  + LG  I RD+   T++  Q  YI T+  RF +    S+  ++    +L+   SP T  + ++MR I YRE +G+LM+AA  TRPD+S+A   L++F  NPG  HW AA++ ++YL  T++  +TYGG    G  +  +  AD+G+  D  R +SG   ++ GGA+SW S+ Q + A +S+E+ YVA+     E+ + R     +  P D    ++ DN+  I +A++     RT+H+ I+ H +RD +E G V + + P
Sbjct:   48 AIEDELGRMKKMGTWELAEKPPGANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAIVAVSVDDLAIA-ANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGGDNANG--MEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERGEVDIVYCP 518          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI)

HSP 1 Score: 273 bits (697), Expect = 2.590e-77
Identity = 163/474 (34.39%), Postives = 259/474 (54.64%), Query Frame = 1
Query:    7 AIAREMDGKTARGVWQVVERPKGKTVLDTRVVFKRKIDKDGRIEKYKCRHVAQVFMQVKGIHYKKPSSPTPAQARIRMLLGMIVSLGWEARQLDVDMAYLEAEVEEEIYVELP--EAYHDSRKQVGQLKKVMYGLVHAGLLW*KAFGIKLEAKGFQRSQADPCVFRRILHGVVVXXXXXXXDDLLVASAMKRDEEQAVRDLCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGVTKTSIIPS-VAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR*VSGGAEMMAGGAISWFSRVQKVTAAASSESVYVALAEMVNELRFLRQVKEFMPLPIDVVIKVHEDNEGTIKMAENRFSSQRTRHVDIKHHIVRDAIEGGVVHVEFGP 1419
            AI  E+D   A G W++V RP    V+D++ V + K +  G I+KYK R VA+ F QV G+ Y    +P    + IR+LL +    GW A   D + AYL ++++E++Y+E P   A+ D +  V +L+K +YGL   G  W +     L   GF R +AD  VF +   G  +       DD L+  + +R  +     + + + I DLG  S+ LG  I+ D  A TL+  QH YI+ +  RF  T    +   +   + LSK+  P + AEV  MR++PYRE +GALM+AA  TRPDI+FA   LA+F  NPG  HW A ++  +YL  TR L + YGG+     +L  +V+AD G   +  R ++G   ++ GGA+SW S+ Q++   +++ES YVA      E  +LR++   +  P+     ++ DN+  I + ++     RT+H+D+++H +R  I+ G + + + P
Sbjct:  816 AIKAELDSLVANGTWRIVPRPSSGNVVDSKWVLRVKKNAAGEIDKYKARLVARGFTQVYGVDYYDTFAPVAKLSSIRLLLAIAARNGWAADSFDFNSAYLNSKLDEDVYLEQPPDHAFADRKAFVLKLEKALYGLKQGGRKWYETLCAALGRLGFTRVEADWGVFYKH-EGEHLIVLAVHVDDCLLTGSSRRLLDDTKSKIGTVYKITDLGPVSWLLGIKISCDLEAGTLSLSQHAYIEALLARFNFTDLKPVSMPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGALMYAALGTRPDIAFAVSTLAQFAQNPGQPHWDAVKRIFRYLLGTRTLSLIYGGQQR---ELEGYVNAD-GATQEHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESEYVAATHAAKEAIWLRRLIGEVFGPLSNATMLYSDNQAAIALTKDGSYHARTKHIDVRYHFIRYYIDAGSIRLLYCP 1284          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA)

HSP 1 Score: 261 bits (666), Expect = 6.200e-77
Identity = 165/483 (34.16%), Postives = 261/483 (54.04%), Query Frame = 1
Query:    1 KRAIAREMDGKTARGVWQVVERPKGKTVLDTRVVFKRKIDKDGRIEKYKCRHVAQVFMQVKGIHYKKPSSPTPAQARIRMLLGMIVSLGWEARQLDVDMAYLEAEVEEEIYVELPEAYH---DSRKQVGQ------LKKVMYGLVHAGLLW*KAFGIKLEAKGFQRSQADPCVFRRILHGVVVXXXXXXXDDLLVASAMKRDEEQAVRDLCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGV--TKTSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR*VSGGAEMMAGGAISWFSRVQKVTAAASSESVYVALAEMVNELRFLRQV-KEFMPLPIDVVIKVHEDNEGTIKMAENRFSSQRTRHVDIKHHIVRDAIEGGVVHVEF 1413
            K+AIA E+        W++V +P  +  +  R VF  K ++ G++ +YK R VA+ + Q  GI Y++  SP      +R +L    + G E  Q DVD A+L  E+EEEIY+ELPE      D  +  G+      L + +YGL  A  +W +     L++ GF+ + ADPCV+ R   G          DD+L+AS  K         +   F I DLG+A + +G  I  D    TL   Q  Y +++ ++FG    K  + P   G + L+K+D P T+ +  +M+  PYR +VG+LM+ A  TRPDIS A  +L++F +NPG  HW A  K ++YL +T+D+GI Y G  G   +  A+  AD+    D  R VSG   M+ G  + W S  QK  A +S+E+ Y+AL++ V E  ++R++ KE     +   + ++EDN+G + +A+N     RT+H+DI++H +R+ +    V +E+
Sbjct:   82 KKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRNEKGQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRG-EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGT--QPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKEIGAEQVGATV-IYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSSEVELEY 559          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 272 bits (695), Expect = 6.910e-77
Identity = 166/479 (34.66%), Postives = 266/479 (55.53%), Query Frame = 1
Query:    1 KRAIAREMDGKTARGVWQVVERPKGKTVLDTRVVFKRKIDKDGRIEKYKCRHVAQVFMQVKGIHYKKPSSPTPAQARIRMLLGMIVSLGWEARQLDVDMAYLEAEVEEEIYVELPEAYHDSRKQ--VGQLKKVMYGLVHAGLLW*KAFGIKLEAKGFQRSQADPCVF-RRILHGVVVXXXXXXXDDLLVASAMKRDEEQAVRDLCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGV--TKTSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR*VSGGAEMMAGGAISWFSRVQKVTAAASSESVYVALAEMVNELRFLRQVKEFMPLPIDVV---IKVHEDNEGTIKMAENRFSSQRTRHVDIKHHIVRDAIEGGVVHVEF 1413
            K AIA+EM    + G + +VE PK   ++ ++ VF+ K + +G IE YK R VAQ F QV GI + +  +P    A IR++L +     WE  Q+DV  AYL  ++EEEIY+  P    +  K+  V +LK+ +YGL  +G  + K    +L + G  RS+ D CVF  R    V++       DD  +A   K       R++ + F ++DLG+  + LG  + RD++A TL+  Q  YI  +  RF +   K+   P   G   LS    P T  + E+M+ IPYRE +G+LM+AA  TRPDI++A   L++F  NPG  HW AA++  +YL  TR+  +T+G    G   +  +  AD+G+    H  +SG   ++ GGA+SW ++ Q V A +S+E+ Y+A+     E  +LR +   +  P D++   +++H DN+  I +A++     RT+H+DI+ H +R+ +E G V +++
Sbjct:  938 KEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGT-KAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPG-TVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFGETTDG---VEGFSDADWGSAEHRHS-ISGYVFLLDGGAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLRSLLADVLHP-DILRYPVRLHSDNKSAIALAKDDAYHARTKHIDIRFHFIRETVENGQVILQY 1409          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY)

HSP 1 Score: 261 bits (668), Expect = 6.960e-77
Identity = 160/479 (33.40%), Postives = 261/479 (54.49%), Query Frame = 1
Query:    1 KRAIAREMDGKTARGVWQVVERPKGKTVLDTRVVFKRKIDKDGRIEKYKCRHVAQVFMQVKGIHYKKPSSPTPAQARIRMLLGMIVSLGWEARQLDVDMAYLEAEVEEEIYVELPEAYHDSRKQ--VGQLKKVMYGLVHAGLLW*KAFGIKLEAKGFQRSQADPCVF-RRILHGVVVXXXXXXXDDLLVASAMKRDEEQAVRDLCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGV--TKTSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR*VSGGAEMMAGGAISWFSRVQKVTAAASSESVYVALAEMVNELRFLRQVKEFMPLPIDVV---IKVHEDNEGTIKMAENRFSSQRTRHVDIKHHIVRDAIEGGVVHVEF 1413
            K AI +EM    + G + +VE PK   ++ ++ VF+ K + +  IE YK R VAQ F QV GI + +  +P    A I ++L +     WE  Q+DV  AYL  ++EEEIY++ P    +  K+  V +LK+ +YGL  +G  + K    +L + G  RS+ D CVF  R    V++       DD  +A   K       R++ + F ++DLG+  + LG  + RD++  TL+  QH YI  +  RF +   K+   P   G   LS    P T  + E+M+ IPYRE++G+LM+AA  TRPDI++A   L++F  NPG  HW AA++  +YL  TR+  +T+G    G   +  +  AD+G+    H  +SG   ++ G A+SW ++ Q V A +S+E+ Y+A+     E  +L  +   +  P D++   +++H DN+  I +A++     RT+H+DI+ H +   +E G V +++
Sbjct:  128 KEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGT-KAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPG-TVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQNPGQPHWEAAKRVFRYLAGTRERWLTFGETTDG---VEGFSDADWGSAEHRHS-ISGYVFLLDGSAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLHSLLADVLHP-DILRYPVRLHSDNKSVIALAKDDAYHARTKHIDIRFHFIHKTVENGQVILQY 599          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 1.970e-76
Identity = 161/474 (33.97%), Postives = 255/474 (53.80%), Query Frame = 1
Query:    4 RAIAREMDGKTARGVWQVVER-PKGKTVLDTRVVFKRKIDKDGRIEKYKCRHVAQVFMQVKGIHYKKPSSPTPAQARIRMLLGMIVSLGWEARQLDVDMAYLEAEVEEEIYVELPEAYHDSRKQVGQLKKVMYGLVHAGLLW*KAFGIKLEAKGFQRSQADPCVFRRILHGVVVXXXXXXXDDLLVASAMKRDEEQAVRDLCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGVTKTSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR*VSGGAEMMAGGAISWFSRVQKVTAAASSESVYVALAEMVNELRFLRQVKEFM-PLPIDVVIKVHEDNEGTIKMAENRFSSQRTRHVDIKHHIVRDAIEGGVVHVEFGP 1419
            +A++ E++G    G + +  + P+G  V+D R VFK K D+ G+I K K R VA+ F Q  G+ Y +  SPT   A IR+++ +      E   LD++ A+ +++++ E+ ++LP        ++ +L K +YGL  A   + K     L   GF++S +DPCV R ++   V+       DD+L A   KR  E  V  L    P  +LG+  ++LG   +RD+ A T+   Q  YI+++ ERF + +TS IP+       S ++   +  E EE   +P+RE+VG LMW A  TRP+ S A   +A+ +  P  + W+AAQK L YL  T  L + Y            +V AD+ +     R VSG   ++AG  +SWFS  QK  + ++SE+ Y+A+ + V E  F+  + + + P      I V EDNEG I +AEN  SS R++H+D++HH +R+  E GV+ V   P
Sbjct:  230 KAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGT-KRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPA-------SPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVP 695          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE)

HSP 1 Score: 270 bits (690), Expect = 2.660e-76
Identity = 152/479 (31.73%), Postives = 268/479 (55.95%), Query Frame = 1
Query:    1 KRAIAREMDGKTARGVWQVVERPKGKTVLDTRVVFKRKIDKDGRIEKYKCRHVAQVFMQVKGIHYKKPSSPTPAQARIRMLLGMIVSLGWEARQLDVDMAYLEAEVEEEIYVELPEAYHDSRKQVGQLKKVMYGLVHAGLLW*KAFGIKLEAKGFQRSQADPCVFRRILHGVVVXXXXXXXDDLLVASAMKRDEEQAVRDLCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGVTK-----TSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR*VSGGAEMMAGGAISWFSRVQKVTAAASSESVYVALAEMVNELRFLRQVKEFMPLPID-VVIKVHEDNEGTIKMAENRFSSQRTRHVDIKHHIVRDAIEGGVVHVEFGP 1419
            K+A+  E   +   G W++V+ P GK  L+++ VF+ K D  G+I K+K R V +   Q KG+ +++  SP    + IR LL +      +  Q+D   A+L+ ++ EEIY+  PE Y +S K V +L+K +YGL  A  +W       L+  G ++S+ DPC++ +     +V       DDLL+ S  K+  ++    L  CF + D+G+A + LG+ I+RD+  + +  DQ  YI  +  RFG+       T + P++     LSK   P +  E ++M  IPY+E VG+L++A+ + RPDI+FA   +++FN NPGP HW A ++ L+Y+  T D  + Y G      +++ +  +D+ +  D  + V+G   +M  G++SW ++ Q  TA +++E+ Y+AL+    E  +LR + E +  P + + +++  DN+G + +A+N     RT+H+D++HH +R+ I   ++   + P
Sbjct:  856 KQAMDVEYKSQLENGTWELVDLPPGKVPLNSKWVFRTKRDVTGKIVKHKARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQESGK-VCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYYKSSQKKMVFVAVWV-DDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCNPAATPLDPNIK----LSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDGTKSS--EITGYCDSDFASDVDERKSVTGYVFLMCDGSVSWGTKKQPTTALSTTEAEYMALSAATQEALWLRGLSEELVPPSERIPLRIFVDNQGALNLAQNGSYQSRTKHIDVRHHFLREKISEKLIKPTYVP 1326          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A8J6HPC5_TENMO (Integrase catalytic domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HPC5_TENMO)

HSP 1 Score: 267 bits (683), Expect = 7.790e-76
Identity = 164/476 (34.45%), Postives = 261/476 (54.83%), Query Frame = 1
Query:    1 KRAIAREMDGKTARGVWQVVERPKGKTVLDTRVVFKRKIDKDGRIEKYKCRHVAQVFMQVKGIHYKKPSSPTPAQARIRMLLGMIVSLGWEARQLDVDMAYLEAEVEEEIYVELPEAYHDSRKQVGQLKKVMYGLVHAGLLW*KAFGIKLEAKGFQRSQADPCVFRRILHGVVVXXXXXXXDDLLVASAMKRDEEQAVRDLCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGVT--KTSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR*VSGGAEMMAGGAISWFSRVQKVTAAASSESVYVALAEMVNELRFLRQ-VKEFMPLPIDVVIKVHEDNEGTIKMAENRFSSQRTRHVDIKHHIVRDAIEGGVVHVEFGP 1419
            K+A+  E +       W +V+RP+GK  +++R V + K  KDG +++ K R VA+ F Q  GI + +  +P      IR+ + + V LG +  QLD   AYL  E+EEE+++E+P      R +V  ++K +YGL  +G    K    KL+ +  +   +DPCV+     G +V       DDL+VAS   +  ++   +L   F + DLG  S+ LG   T++   +T+T  Q +YI+ +  RF +   K    P    EK LSK   P T+ E + +  +P++ +VG+LM+ A  TRPDI+ A   L++FN N G  HWRAA++ L+YL  T +LG+ +      G +L  +  AD+G   D  R  +G     A  A+SW SR Q+  A +S+E+ Y+AL+E   E   LR+ + E +  P   +I    DN+G  ++++N     RT+HVDI+HH +R+A+E G + VE+ P
Sbjct:  641 KKAMNAEYEALKRNQTWIIVDRPQGKKTVESRWVLRTKFKKDGSVDRRKARLVAKDFTQKPGIDFNETFAPVARLGSIRLFMAIAVELGLQVHQLDFTSAYLNGEIEEEVFMEVP------RNKVCLIRKALYGLKQSGRQGYKKLDEKLKQQKLKPLNSDPCVYINKEDGNIVIVVIYV-DDLMVASDNPKKLQRLKLELSKSFEMKDLGPLSFCLGIEFTQNVEKQTITMSQSKYIKEILSRFNMENCKGVTTPINLNEK-LSKEMCPKTEEEKKPVELLPHQSLVGSLMYLAVSTRPDIAHAVSMLSQFNTNFGEQHWRAAKRILRYLKNTENLGLMF---KKSGQELVGYADADWGASIDDRRSYTGYVFNFANVAVSWESRKQRTVAMSSTEAEYMALSESTKEAIHLRRFLSEVLDQPSTTII--FNDNQGAGQLSKNNVFHNRTKHVDIRHHFIREAVERGDIKVEYLP 1103          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A2G8SFR3_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SFR3_9APHY)

HSP 1 Score: 266 bits (680), Expect = 7.820e-75
Identity = 161/475 (33.89%), Postives = 255/475 (53.68%), Query Frame = 1
Query:    7 AIAREMDGKTARGVWQVVERPK-GKTVLDTRVVFKRKIDKDGRIEKYKCRHVAQVFMQVKGIHYKKPSSPTPAQARIRMLLGMIVSLGWEARQLDVDMAYLEAEVEEEIYVELP--EAYHDSRKQVGQLKKVMYGLVHAGLLW*KAFGIKLEAKGFQRSQADPCVFRRILHGVVVXXXXXXXDDLLVASAMKRDEEQAVRDLCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGVTKTSIIPS-VAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR*VSGGAEMMAGGAISWFSRVQKVTAAASSESVYVALAEMVNELRFLRQVKEFMPLPIDVVIKVHEDNEGTIKMAENRFSSQRTRHVDIKHHIVRDAIEGGVVHVEFGP 1419
            AI  E+D   A G W+++ERP  G  V+D++ V   K D  G I+KYK R VA+ F QV G+ Y +  +P    + IR +  +    GW     D   A+L + ++E++Y+E P    + D  K V +LKK +YGL   G  W +     L   GF R +AD  +F +   G +V       D ++   +   +     + L + + + DLG  S+ LG  +TRD  A TL+  QH YI ++  RF       I + +     LSK+  P +  +V  M+++PYRE +GALM+AA  TRPDI+FA   LA++++NPG THW A ++  +YL  TR L + YGG   G   L  +V AD G+  +  R ++G   ++ GGA+SW S+ Q++   +++ES YVA      E  +LR+    +  P+     +H DN+  I + ++     RT+H+DI++H +R +IE G + + + P
Sbjct: 1029 AIQAELDSLKANGTWELIERPTDGTNVVDSKWVLHVKKDSAGEIDKYKARLVARGFTQVHGVDYTETFAPVARLSSIRTIFAIASRNGWPIDVFDFSSAFLNSTLDEDVYLEQPPHHEFADRGKFVLKLKKALYGLKQGGRKWYETLCAALADLGFGRVEADHGIFFKREDGHLVVLAVHVDDCIITGDSGSLNNSYKTQ-LSTRYKLTDLGPVSWVLGIKVTRDLEARTLSLSQHSYIDSIITRFNFDDLKPISTPMDPHLQLSKTQCPESALDVARMKRVPYREAIGALMYAAMGTRPDIAFAVSTLAQYSENPGWTHWEAVKRVFRYLVGTRHLSLVYGGGKDG---LEGFVDAD-GSSQEHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESEYVAATHAAKEAIWLRRFIGEVFQPLSEPTTLHGDNQAAIALTKDGSYHARTKHIDIRYHFIRYSIEAGSIRLIYCP 1498          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8K1CTN1_PYTOL1.680e-7933.76Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
A0A4Y9ZVS1_9AGAM3.500e-7934.32Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060SPD4_PYCCI2.590e-7734.39Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A3Q908_9STRA6.200e-7734.16Retrovirus-related Pol polyprotein from transposon... [more]
A0A401GN13_9APHY6.910e-7734.66Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A401GP19_9APHY6.960e-7733.40Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JV80_9PHAE1.970e-7633.97Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0A9Z683_LYGHE2.660e-7631.73Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J6HPC5_TENMO7.790e-7634.45Integrase catalytic domain-containing protein n=1 ... [more]
A0A2G8SFR3_9APHY7.820e-7533.89Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67005contigH-elongata_contig67005:938..2356 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score129.4
Seed ortholog evalue1.6e-27
Seed eggNOG ortholog164328.Phyra85923
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1419
Cds size531
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67005.14307.1prot_H-elongata_contig67005.14307.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig67005 1505..2035 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931060.407174-UTR-H-elongata_contig67005:937..15041622931060.407174-UTR-H-elongata_contig67005:937..1504Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig67005 938..1504 +
1691679681.5436754-UTR-H-elongata_contig67005:937..15041691679681.5436754-UTR-H-elongata_contig67005:937..1504Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig67005 938..1504 +
1622931060.4432085-UTR-H-elongata_contig67005:2035..23561622931060.4432085-UTR-H-elongata_contig67005:2035..2356Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig67005 2036..2356 +
1691679681.5680747-UTR-H-elongata_contig67005:2035..23561691679681.5680747-UTR-H-elongata_contig67005:2035..2356Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig67005 2036..2356 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931060.4258082-CDS-H-elongata_contig67005:1504..20351622931060.4258082-CDS-H-elongata_contig67005:1504..2035Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67005 1505..2035 +
1691679681.5556118-CDS-H-elongata_contig67005:1504..20351691679681.5556118-CDS-H-elongata_contig67005:1504..2035Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67005 1505..2035 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig67005.14307.1

>prot_H-elongata_contig67005.14307.1 ID=prot_H-elongata_contig67005.14307.1|Name=mRNA_H-elongata_contig67005.14307.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=177bp
MKRDEEQAVRDLCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQ
TMAERFGVTKTSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGAL
MWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITY
GGKPGGGGKLSAWVSADYGTCPDMHR*
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mRNA from alignment at H-elongata_contig67005:938..2356+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig67005.14307.1 ID=mRNA_H-elongata_contig67005.14307.1|Name=mRNA_H-elongata_contig67005.14307.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1419bp|location=Sequence derived from alignment at H-elongata_contig67005:938..2356+ (Himanthalia elongata Himel1 dioecious)
AAAAGGGCGATCGCGCGCGAGATGGATGGGAAAACTGCTCGAGGCGTGTG GCAGGTGGTGGAGCGCCCAAAAGGGAAGACGGTGTTGGACACGAGAGTAG TTTTCAAGCGCAAAATCGACAAGGATGGAAGGATCGAGAAGTATAAATGT CGTCACGTGGCGCAGGTTTTCATGCAGGTCAAAGGCATACACTACAAGAA ACCCTCCTCTCCGACTCCTGCGCAGGCCAGAATTAGAATGTTACTGGGCA TGATCGTGTCTCTTGGCTGGGAGGCGCGGCAGCTGGACGTCGACATGGCT TACCTGGAGGCCGAAGTGGAGGAGGAGATCTACGTTGAGCTCCCGGAGGC ATACCATGACTCCAGGAAGCAAGTCGGCCAACTAAAGAAGGTAATGTACG GACTCGTCCACGCCGGGCTGCTGTGGTAAAAAGCGTTCGGGATCAAGCTC GAGGCGAAGGGTTTTCAGAGATCTCAAGCCGACCCATGCGTGTTCCGGCG GATTCTCCACGGGGTAGTGGTAGTCGTCATTGTGGTCTACGTCGACGACC TGCTGGTTGCTAGTGCGATGAAACGTGACGAGGAGCAAGCGGTGAGGGAC CTGTGCTCCTGTTTCCCAATCAACGATCTAGGGAAGGCTTCGTATTACCT GGGATACCACATCACGCGGGACCAGAACGCCGAGACACTGACGTTCGACC AGCATCAGTACATACAGACTATGGCGGAACGTTTTGGCGTGACGAAGACC AGCATCATCCCGTCCGTGGCAGGAGAAAAAGCCCTTTCGAAATCAGACAG CCCGCCAACGGACGCAGAGGTTGAAGAAATGCGCCAAATTCCCTACCGAG AAATCGTTGGAGCCCTAATGTGGGCAGCGACGATGACCAGGCCCGACATT TCATTCGCTGCGCACCAACTGGCGAAATTCAACGACAATCCGGGACCGAC ACACTGGAGGGCAGCTCAGAAAGCGCTGCAATATTTATGGCGTACTCGGG ACCTCGGGATCACCTACGGAGGGAAACCGGGGGGGGGGGGCAAGTTATCA GCGTGGGTCAGCGCAGACTACGGCACCTGCCCGGACATGCATCGCTGAGT GTCGGGAGGGGCGGAGATGATGGCTGGCGGAGCCATTAGTTGGTTCTCAC GAGTGCAAAAGGTAACGGCGGCGGCGTCGTCCGAATCGGTATACGTCGCG CTGGCTGAGATGGTAAACGAGTTGCGTTTCCTACGACAGGTCAAGGAGTT CATGCCCCTCCCAATCGACGTCGTCATCAAGGTACACGAGGACAACGAAG GCACAATCAAGATGGCGGAAAACCGCTTCAGCAGTCAACGAACAAGGCAC GTGGACATCAAGCATCACATTGTCCGTGACGCGATCGAGGGGGGAGTGGT TCACGTAGAATTCGGTCCG
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Coding sequence (CDS) from alignment at H-elongata_contig67005:938..2356+

>mRNA_H-elongata_contig67005.14307.1 ID=mRNA_H-elongata_contig67005.14307.1|Name=mRNA_H-elongata_contig67005.14307.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1062bp|location=Sequence derived from alignment at H-elongata_contig67005:938..2356+ (Himanthalia elongata Himel1 dioecious)
ATGAAACGTGACGAGGAGCAAGCGGTGAGGGACCTGTGCTCCTGTTTCCC
AATCAACGATCTAGGGAAGGCTTCGTATTACCTGGGATACCACATCACGC
GGGACCAGAACGCCGAGACACTGACGTTCGACCAGCATCAGTACATACAG
ACTATGGCGGAACGTTTTGGCGTGACGAAGACCAGCATCATCCCGTCCGT
GGCAGGAGAAAAAGCCCTTTCGAAATCAGACAGCCCGCCAACGGACGCAG
AGGTTGAAGAAATGCGCCAAATTCCCTACCGAGAAATCGTTGGAGCCCTA
ATGTGGGCAGCGACGATGACCAGGCCCGACATTTCATTCGCTGCGCACCA
ACTGGCGAAATTCAACGACAATCCGGGACCGACACACTGGAGGGCAGCTC
AGAAAGCGCTGCAATATTTATGGCGTACTCGGGACCTCGGGATCACCTAC
GGAGGGAAACCGGGGGGGGGGGGCAAGTTATCAGCGTGGGTCAGCGCAGA
CTACGGCACCTGCCCGGACATGCATCGCTGAATGAAACGTGACGAGGAGC
AAGCGGTGAGGGACCTGTGCTCCTGTTTCCCAATCAACGATCTAGGGAAG
GCTTCGTATTACCTGGGATACCACATCACGCGGGACCAGAACGCCGAGAC
ACTGACGTTCGACCAGCATCAGTACATACAGACTATGGCGGAACGTTTTG
GCGTGACGAAGACCAGCATCATCCCGTCCGTGGCAGGAGAAAAAGCCCTT
TCGAAATCAGACAGCCCGCCAACGGACGCAGAGGTTGAAGAAATGCGCCA
AATTCCCTACCGAGAAATCGTTGGAGCCCTAATGTGGGCAGCGACGATGA
CCAGGCCCGACATTTCATTCGCTGCGCACCAACTGGCGAAATTCAACGAC
AATCCGGGACCGACACACTGGAGGGCAGCTCAGAAAGCGCTGCAATATTT
ATGGCGTACTCGGGACCTCGGGATCACCTACGGAGGGAAACCGGGGGGGG
GGGGCAAGTTATCAGCGTGGGTCAGCGCAGACTACGGCACCTGCCCGGAC
ATGCATCGCTGA
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