mRNA_H-elongata_contig67000.14306.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig67000.14306.1
Unique NamemRNA_H-elongata_contig67000.14306.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig67000.14306.1 vs. uniprot
Match: D8LSC4_ECTSI (U2 small nuclear ribonucleoprotein A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC4_ECTSI)

HSP 1 Score: 314 bits (804), Expect = 5.670e-100
Identity = 168/201 (83.58%), Postives = 182/201 (90.55%), Query Frame = 1 
Query:    1 VTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSRIATDLGTQLPNLSCLILTNNKLSTLADLEGLRTCKKLAILSLMHNEVVNKQYYRLYAINLVPSLKQLDFQKVTLKASPLEREEAGRLARSQAGQVMRKDVAQEAVKAKIFTPGKPAAAEQKLTDEHRAIYAERIAKATTVEEVEMLSRKIQAGIIPSATYK 603
            VTQDQFDA+DFSDNEIKKLDNFPRYKRLSSLLLCNNHVS+I+ DLGT LPNLSCLILTNNKLSTLA+L+GL TC KL +LSL+HNEVVNKQYYRLY INL+PSLKQLDFQKVT+K    ERE A RLARSQAGQ M +DVAQ+A KAK FTPG PAA EQKLTDEHRAIYA+RIAKATTVEE+EMLS+KIQAGIIPSA YK
Sbjct:   38 VTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVK----ERESAVRLARSQAGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYK 234
[Close]
BLAST of mRNA_H-elongata_contig67000.14306.1 vs. uniprot
Match: A0A6H5L3Q9_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q9_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 3.520e-51
Identity = 103/141 (73.05%), Postives = 114/141 (80.85%), Query Frame = 1 
Query:  181 KLSTLADLEGLRTCKKLAILSLMHNEVVNKQYYRLYAINLVPSLKQLDFQKVTLKASPLEREEAGRLARSQAGQVMRKDVAQEAVKAKIFTPGKPAAAEQKLTDEHRAIYAERIAKATTVEEVEMLSRKIQAGIIPSATYK 603
            +LSTLA+L+GL TC KL +LSL+HNEVVNKQYYRLY INLVPSLKQLDFQKVT+KA                GQ M +DVAQ+A KAK FTPG PAA EQKLTDEHRAIYA+RIAKATTVEE+EMLS+KIQAGIIPSA YK
Sbjct:    2 QLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVTVKA----------------GQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYK 126
[Close]
BLAST of mRNA_H-elongata_contig67000.14306.1 vs. uniprot
Match: A0A835ZE59_9STRA (Leucine-rich repeat-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE59_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.480e-47
Identity = 106/210 (50.48%), Postives = 141/210 (67.14%), Query Frame = 1 
Query:    1 VTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSRIATDLGTQLPNLSCLILTNNKLSTLADLEGLRTCKKLAILSLMHNEVVNKQYYRLYAINLVPSLKQLDFQKVTLKASPLEREEAGRLARSQAGQVMRKDVAQEAVKAKIFTPGKPAAAEQKLTDEHRAIYAERIAKATTVEEVEMLSRKIQAGIIPSATYKIQTSAAGAA 630
            VTQDQFD IDFSDNEI+KLDNFPR  RL++LLL NN ++RI  D+G +LPNLSCL+LTNN +S L++L+ L  C++L +LSL+ N V   Q+YRLY I+ +PSLK LDF KV  +    ER  A RL +S AG+ M +D+A   ++AK F PG   AA   LT   R      I +A T EE++ L R ++AGI P+   ++  +AA AA
Sbjct:   38 VTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKE----ERARAERLFQSAAGRAMEEDIA---LQAKTFVPG--GAARAPLTPAQRTQVIAMIQRAMTTEEIDRLERMLEAGIYPAERKELDAAAAAAA 238
[Close]
BLAST of mRNA_H-elongata_contig67000.14306.1 vs. uniprot
Match: A0A7S2G9L1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G9L1_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.230e-44
Identity = 106/223 (47.53%), Postives = 146/223 (65.47%), Query Frame = 1 
Query:    1 VTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSRIATDLGTQLPNLSCLILTNNKLSTLADLEGLRTCKKLAILSLMHNEVVNKQYYRLYAINLVPSLKQLDFQKVTLKASPLEREEAGRLARSQAGQVMRKDVAQEAVKAKIFTPGK-------PAA---AEQKLTDEHRAIYAERIAKATTVEEVEMLSRKIQAGIIPSATYKIQTSAAGAANGS 639
            VTQDQFD +DF+DNEIK++DNFP +KRLS+LLL NNHV+R++  L  QLPNL CL         L++++ L  C KL +LS ++N ++ +Q+YRLY I  +P LK LDF KV      +EREEA +L RS AG++M++DV  E+   K FTPG+       P A   AEQK  D+ RA+    IA A+T EEV+ + R+++AG+IP+   K    A GAA G+
Sbjct:   39 VTQDQFDVLDFTDNEIKRVDNFPTFKRLSTLLLSNNHVTRLSPTLSEQLPNLDCLXXXXXXXXNLSEVDNLIGCTKLTMLSFVNNPIIRRQHYRLYVIAKLPQLKALDFVKV----KAIEREEAAKLFRSAAGRLMQQDVEAES---KTFTPGEDIPSTTNPMANLTAEQK--DQVRAV----IAAASTPEEVDRIERQLKAGVIPT-LKKAAAPAGGAAEGT 247
[Close]
BLAST of mRNA_H-elongata_contig67000.14306.1 vs. uniprot
Match: A0A7S3XKJ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKJ1_HETAK)

HSP 1 Score: 167 bits (423), Expect = 4.850e-44
Identity = 100/210 (47.62%), Postives = 142/210 (67.62%), Query Frame = 1 
Query:    1 VTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSRIATDLGTQLPNLSCLILTNNKLSTLADLEGLRTCKKLAILSLMHNEVVNKQYYRLYAINLVPSLKQLDFQKVTLKASPLEREEAGRLARSQAGQVMRKDVAQEAVKAKIFTPGKPAAAEQK-LTDEHRAIYAERIAKATTVEEVEMLSRKIQAGIIPSATYKIQTSAAGA 627
             TQD FD IDFSDNEIKKL+NFPR +RL++LL  NNH+S+IA  +  Q+PNLS L     ++  LA+L+ L+  +KL +LSL+ N VV +Q+YRLY I+  P+LK LDF+KV  +    ER+EA RL +S+AGQ M+ DV +E    K F  G+    E+K LT++ + +  E I  ATT EEV+ L R+++AGI+P+   K  ++ +GA
Sbjct:   38 ATQDMFDTIDFSDNEIKKLENFPRMERLTTLLFNNNHISKIAESIKDQVPNLSTLXXXXXRIQHLAELDSLQGLRKLTLLSLLENPVVRRQHYRLYVIHRCPALKYLDFRKVKQQ----ERQEAARLFKSKAGQQMQDDVQKEI---KTFQAGEKQEREKKRLTEDQKNLIREAIKNATTPEEVDKLERQLKAGIMPNLAQKGPSNTSGA 240
[Close]
BLAST of mRNA_H-elongata_contig67000.14306.1 vs. uniprot
Match: E9HAB1_DAPPU (LRRcap domain-containing protein n=6 Tax=Daphnia TaxID=6668 RepID=E9HAB1_DAPPU)

HSP 1 Score: 157 bits (396), Expect = 9.250e-42
Identity = 98/196 (50.00%), Postives = 129/196 (65.82%), Query Frame = 1 
Query:    1 VTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSRIATDLGTQLPNLSCLILTNNKLSTLADLEGLRTCKKLAILSLMHNEVVNKQYYRLYAINLVPSLKQLDFQKVTLKASPLEREEAGRLARSQAGQVMRKDVAQEAVKAKIFTPGKPAAAEQKLTDEHRAIYAERIAKATTVEEVEMLSRKIQAGIIP 588
             T DQFD IDFSDN+I+KLD FP  +R+ SLLL NN + RIA  LG  +PNL  L+LTNN L  L DL+ L    KL  LSL+ N V NKQ+YR Y IN +PSL+ LDF+KV LK    ERE A  L +S+ G+V+ K++AQ++         K  A   K T+E RAI  E +A A+T+EEVE L++ ++AG++P
Sbjct:   39 ATLDQFDTIDFSDNDIRKLDGFPLLRRIKSLLLNNNRILRIADGLGEVIPNLETLVLTNNHLQELGDLDPLAEFSKLTYLSLLSNPVANKQHYRSYVINKLPSLRVLDFRKVKLK----EREAARDLFKSKKGKVLAKEIAQKSKFLSAEAGNK--APIGKNTNEARAI-REAVANASTLEEVERLNQMLRAGVVP 227
[Close]
BLAST of mRNA_H-elongata_contig67000.14306.1 vs. uniprot
Match: A0A7S2WMG2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMG2_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.300e-41
Identity = 96/199 (48.24%), Postives = 131/199 (65.83%), Query Frame = 1 
Query:    1 VTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSRIATDLGTQLPNLSCLILTNNKLSTLADLEGLRTCKKLAILSLMHNEVVNKQYYRLYAINLVPSLKQLDFQKVTLKASPLEREEAGRLARSQAGQVMRKDVAQEAVKAKIFTPGK--PAAAEQKLTDEHRAIYAERIAKATTVEEVEMLSRKIQAGIIPS 591
            VT+DQ+D +DFSDNEIKKL+NFPR+ RLS+LLL NNH++RI+  LG QL +L            L++++ L  C KL  LSL++N V  +Q+YRLY I+ +PS+K LDF KV     P ER +A RL +S AG++M++DV  EA     FTPG+  P+      T+E  A     IA ATT EEV+ + R+++AGIIPS
Sbjct:   39 VTKDQYDTLDFSDNEIKKLENFPRFSRLSTLLLNNNHIARISPTLGEQLLSLQXXXXXXXXXXQLSEVDHLVGCTKLTTLSLVNNPVARRQHYRLYVIHKLPSVKVLDFSKV----KPQERADAARLFKSAAGKLMQQDVDAEA---STFTPGEDMPSNPMANFTEEQMAQVRAVIAAATTPEEVDRVERQLKAGIIPS 230
[Close]
BLAST of mRNA_H-elongata_contig67000.14306.1 vs. uniprot
Match: A0A3Q1GBX3_9TELE (U2 small nuclear ribonucleoprotein A'-like n=2 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=A0A3Q1GBX3_9TELE)

HSP 1 Score: 155 bits (391), Expect = 1.660e-41
Identity = 93/199 (46.73%), Postives = 127/199 (63.82%), Query Frame = 1 
Query:    1 VTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSRIATDLGTQLPNLSCLILTNNKLSTLADLEGLRTCKKLAILSLMHNEVVNKQYYRLYAINLVPSLKQLDFQKVTLKASPLEREEAGRLARSQAGQVMRKDVAQEAVKAKIFTPGKPAAAEQKLTDEHRA---IYAERIAKATTVEEVEMLSRKIQAGIIP 588
             T DQFD +DFSDNEI+KLD FP  +RL +LL+ NN + RI  +L   LP+L+ L+LTNN +  L DL+ L T K L +LSL+ N V NK++YRLY IN +P ++ LDFQKV LK    ER+EA ++ + + G  + KD+A+   + K FTPG  A  E+K T   +A        IA A+++ EVE L   +QAG IP
Sbjct:   16 ATLDQFDTVDFSDNEIRKLDGFPLLRRLKTLLMNNNRICRIGENLEQSLPSLTELVLTNNNIQELGDLDPLATVKTLTLLSLLRNPVTNKKHYRLYVINKIPQIRVLDFQKVKLK----ERQEAEKMFKGKRGAQLAKDIAR---RTKTFTPGVAAQPEKKRTGPSQADVDAIKNAIANASSLAEVERLKGMLQAGQIP 207
[Close]
BLAST of mRNA_H-elongata_contig67000.14306.1 vs. uniprot
Match: UPI0002657A99 (U2 small nuclear ribonucleoprotein A' n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002657A99)

HSP 1 Score: 156 bits (395), Expect = 2.290e-41
Identity = 93/198 (46.97%), Postives = 132/198 (66.67%), Query Frame = 1 
Query:    1 VTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSRIATDLGTQLPNLSCLILTNNKLSTLADLEGLRTCKKLAILSLMHNEVVNKQYYRLYAINLVPSLKQLDFQKVTLKASPLEREEAGRLARSQAGQVMRKDVAQEAV--KAKIFTPGKPAAAEQKL---TDEHRAIYAERIAKATTVEEVEMLSRKIQAG 579
             T DQFD IDFSDN+I+KL+ FP  KR+ SLLL NN +SRIA +L  QLP+L  LILTNN +  L DL+ L T K L  LS++ N V  K++YRLY I  VP L+ LDF+++ +     EREEA ++ + + G+ + K++ Q++   K K FTPG+PA  E      TD+ +A+    +AKATT+EEVE L++ +++G
Sbjct:   39 ATLDQFDTIDFSDNDIRKLEGFPYLKRIKSLLLNNNRISRIADNLEEQLPSLETLILTNNNVGNLGDLDALSTVKTLRFLSVLKNPVALKKHYRLYVIFRVPQLRILDFKRIKMA----EREEAKKVFKGKKGEALAKEIGQKSAPEKVKTFTPGEPAKLENTFAMTTDDQKAL-KNALAKATTLEEVERLTQLLKSG 231
[Close]
BLAST of mRNA_H-elongata_contig67000.14306.1 vs. uniprot
Match: A0A3Q3N132_9LABR (Small nuclear ribonucleoprotein polypeptide A' n=2 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3N132_9LABR)

HSP 1 Score: 155 bits (391), Expect = 3.210e-41
Identity = 94/199 (47.24%), Postives = 126/199 (63.32%), Query Frame = 1 
Query:    1 VTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSRIATDLGTQLPNLSCLILTNNKLSTLADLEGLRTCKKLAILSLMHNEVVNKQYYRLYAINLVPSLKQLDFQKVTLKASPLEREEAGRLARSQAGQVMRKDVAQEAVKAKIFTPGKPAAAEQKLTDEHRA---IYAERIAKATTVEEVEMLSRKIQAGIIP 588
             T DQFD +DFSDNEI+KLD FP  KRL +LL+ NN + R+  +L   LP L+ LILTNN +  L DL+ L T K L +LSL+ N V NK++YRLY IN +P ++ LDFQKV  K    ER+EA ++ + + G  + KD+A+   + K FTPG PA  E+K T   +A        IA A+++ EVE L   +QAG IP
Sbjct:   39 ATLDQFDTVDFSDNEIRKLDGFPLLKRLKTLLMNNNRICRVGENLEQSLPCLTELILTNNNIQELGDLDPLATVKTLTLLSLLRNPVTNKKHYRLYMINKIPQIRVLDFQKVKQK----ERQEAEKMFKGKRGAQLAKDIAK---RTKTFTPGVPAQLEKKKTGPSQADVEAIKNAIANASSLAEVERLKGMLQAGQIP 230
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67000.14306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSC4_ECTSI5.670e-10083.58U2 small nuclear ribonucleoprotein A n=1 Tax=Ectoc... [more]
A0A6H5L3Q9_9PHAE3.520e-5173.05SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZE59_9STRA1.480e-4750.48Leucine-rich repeat-domain-containing protein n=1 ... [more]
A0A7S2G9L1_9STRA1.230e-4447.53Hypothetical protein (Fragment) n=2 Tax=Florenciel... [more]
A0A7S3XKJ1_HETAK4.850e-4447.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
E9HAB1_DAPPU9.250e-4250.00LRRcap domain-containing protein n=6 Tax=Daphnia T... [more]
A0A7S2WMG2_9STRA1.300e-4148.24Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A3Q1GBX3_9TELE1.660e-4146.73U2 small nuclear ribonucleoprotein A'-like n=2 Tax... [more]
UPI0002657A992.290e-4146.97U2 small nuclear ribonucleoprotein A' n=1 Tax=Gale... [more]
A0A3Q3N132_9LABR3.210e-4147.24Small nuclear ribonucleoprotein polypeptide A' n=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67000contigH-elongata_contig67000:112..3211 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score320.5
Seed ortholog evalue1.1e-84
Seed eggNOG ortholog2880.D8LSC4
KEGG koko:K11092
KEGG Pathwayko03040,map03040
KEGG ModuleM00352
EggNOG free text desc.U2 snRNA binding
EggNOG OGsCOG4886@1,KOG1644@2759
Ec32 ortholog descriptionU2 small nuclear ribonucleoprotein A
Ec32 orthologEc-21_003190.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Hectar predicted targeting categoryother localisation
Exons5
Model size1212
Cds size1212
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67000.14306.1prot_H-elongata_contig67000.14306.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig67000 112..3211 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931060.2621403-CDS-H-elongata_contig67000:111..6411622931060.2621403-CDS-H-elongata_contig67000:111..641Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67000 112..641 -
1691679681.4900496-CDS-H-elongata_contig67000:111..6411691679681.4900496-CDS-H-elongata_contig67000:111..641Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67000 112..641 -
1622931060.2762012-CDS-H-elongata_contig67000:1052..11881622931060.2762012-CDS-H-elongata_contig67000:1052..1188Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67000 1053..1188 -
1691679681.5063481-CDS-H-elongata_contig67000:1052..11881691679681.5063481-CDS-H-elongata_contig67000:1052..1188Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67000 1053..1188 -
1622931060.2950928-CDS-H-elongata_contig67000:1781..19701622931060.2950928-CDS-H-elongata_contig67000:1781..1970Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67000 1782..1970 -
1691679681.5149238-CDS-H-elongata_contig67000:1781..19701691679681.5149238-CDS-H-elongata_contig67000:1781..1970Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67000 1782..1970 -
1622931060.3320363-CDS-H-elongata_contig67000:2354..25281622931060.3320363-CDS-H-elongata_contig67000:2354..2528Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67000 2355..2528 -
1691679681.5234087-CDS-H-elongata_contig67000:2354..25281691679681.5234087-CDS-H-elongata_contig67000:2354..2528Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67000 2355..2528 -
1622931060.3511705-CDS-H-elongata_contig67000:3028..32111622931060.3511705-CDS-H-elongata_contig67000:3028..3211Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67000 3029..3211 -
1691679681.5329425-CDS-H-elongata_contig67000:3028..32111691679681.5329425-CDS-H-elongata_contig67000:3028..3211Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67000 3029..3211 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig67000.14306.1

>prot_H-elongata_contig67000.14306.1 ID=prot_H-elongata_contig67000.14306.1|Name=mRNA_H-elongata_contig67000.14306.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=404bp
VTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSRIATDLGTQLP
NLSCLILTNNKLSTLADLEGLRTCKKLAILSLMHNEVVNKQYYRLYAINL
VPSLKQLDFQKVTLKASPLEREEAGRLARSQAGQVMRKDVAQEAVKAKIF
TPGKPAAAEQKLTDEHRAIYAERIAKATTVEEVEMLSRKIQAGIIPSATY
KIQTSAAGAANGSAPPAVAATSGIAPSEAKAEAVVGTSEAEAKEKAEEGA
EGAGTEKALPTTSSMDVEKGHGEVELSAAATEAAADKRNGNVEDEAPEDG
SDLSSAGAGDAMVVENGGNDEREEKEQESAAMDVTGGAEAGDVGGEAKDS
EQDGEKEVAEAAEQEQEEEGAGDMEQEEEGAGEPKLSEAQIKKFKVQRVA
FSS*
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mRNA from alignment at H-elongata_contig67000:112..3211-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig67000.14306.1 ID=mRNA_H-elongata_contig67000.14306.1|Name=mRNA_H-elongata_contig67000.14306.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3100bp|location=Sequence derived from alignment at H-elongata_contig67000:112..3211- (Himanthalia elongata Himel1 dioecious)
GTGACCCAAGATCAGTTCGACGCGATCGACTTCTCGGACAACGAGATCAA
GAAGCTGGACAACTTCCCCCGCTACAAGCGCCTGTCTTCACTCCTGCTGT
GCAACAACCACGTCTCCCGGATCGCGACAGACCTCGGCACGCAGTTGCCC
AACCTGTCTTGTCTAATTCTCACCAATAACAAGGTCATGTATCTTTCTTT
CTCGAGATCGCGTGCGATGCTTGTACCAGATCACCTTGTCTAGAGAGGCA
TTTATGTTTTGTAGAAAATACCCTCCCTACCCCCCCCCAAACAAACAGAC
ACACACACACACACACTTTAAGACGTGGAGTTTCCTGATGCGCGCTATCA
TCCACCCCTCCGGACAAGAGGCTGGTTGGATTGCTGGTACTACTGCTGGA
CAATGCACAACTCTAACCGCTATTTTTATGCGTGCCAAGACTCCGCTGCG
CTAACAGTCTACCCTAGTTTTAGAGCTATAATAGTGGAACGGCAGTATGT
AACAACATAATTTTCAATTATCTTGCATTCCAAGTTCTCCCTCTCCCTTC
TTGCTTCTTATCCACTATTCATTATTCATTATTCATTATTCACTTATTCA
TTATTCATTATCCATTATTCACTTATTCATTATTCATTATATCTGCGGTT
CATTATTCATTATTTCTTATGATGCGGTCTCAGCTGTCCACGCTGGCCGA
TTTGGAGGGCCTCAGGACGTGCAAAAAGCTGGCGATCTTGTCGCTGATGC
ACAACGAGGTAGTTAACAAGCAATACTACCGCCTCTACGCCATCAACCTG
GTGCCGAGCCTCAAGCAGCTCGATTTCCAGAAGGTCACTTTGAAGGCGAG
TCCCCTGGTGCCCTCTCTCTGACGAGGCGTGTAAAGGGGCATCGAACCGT
TGAGGCAGTAAAACAGCCACAGCCAGTTATAGTTATAGTGCAAAGCAGAA
AGAGGATTAACACCTTGTTTTTCTTCTCCCTGATCTTTGTTCTCCCCCGA
TGATTCGCTGGTGTGGAAGGCGTCGATTTTCGAAGTCTGACGCGAGACAT
TTGGCCGTTTTTATCTTTTTTACCCAATCGCGGTCAATAGACCTTAAATG
ACCGGCAGCGACGGTGGTGGTAAACATCTTGATAGCTTTGATAGGTGCGG
TTCCAATTTGCCTGCAGACCGTCATAGTCTACTCCTTTTATTCATGCAAC
ACACCTTTTGGTTTTGTATTTTTGGCTTCCTTCGCGCGCAGGAGCGAGAG
GAAGCGGGGCGATTGGCCAGGTCGCAGGCGGGACAGGTGATGAGGAAGGA
CGTGGCACAGGAGGCCGTAAAGGCGAAGATCTTCACCCCGGGGAAGCCGG
CCGCTGCCGAGCAAAAGCTCACGGACGAGCACCGAGCGATCTACGCCGAG
CGCATTGCGAAAGCCACCACGGTGGAAGAGGTGAGCTAGCGAGCGCTTTC
CGTCCACGATTTTGCAACTCCCATCCACCCACACTTTTCGGAGGAAAAAA
TAGAAATAAAAATAATGTTGGACGTAAGAAAACATGTTCTAAGTGTGGGG
CGTCGCGGTCCATAAACCTTCGGTCCTGCTTTCGCCATAAACCTTCGGTC
TTGCTATCGCCATAAACCTTCGTGCGATCGCCATAAAAACATTTTGTTGG
GCCATTCAAAAGGGTGCGTGTGGTTGCGTACGTGCTCTTTTCTTGCGACG
GTGAAAGTGTGTGTGTGTGGGGGGTTATGCCCACCCCTCACCGCCCGAGT
TCAAGACTGACGCGAGACGGGACAGCAGAACCTGTCTCGGCGAGACTATA
TTTTTGGGCGCGAATGGGGGCAGGAAAAAATTATTGTCCTTGATGAGCTG
GCCACGAGCAGGATTGGAAACTATATCCAGTTGATCCATACTAAAGTCTA
TATACTATATACATTATATACTGTATACTGCTATATAGACTATATGTTAT
GACCACACACAGCTTGACACATACTGTGCTTTTTTGGCGGCCGTCGCTGC
ATGCCCCCTTCTTCGATTCACAGGTCGAGATGCTCTCAAGGAAGATTCAG
GCCGGTATCATACCTTCCGCGACGTACAAGATTCAGACCAGCGCGGCAGG
GGCTGCCAACGGCTCCGCGCCGCCCGCGGTGGCAGCCACTTCTGGGATTG
CTCCCAGTGGTTCTGGGGGGAGGGAGACGGGTGGCGGCGGCCGTGAAGAT
GGTGCTGTTGCGGGGTCGAAGGATGACGGGCAATCCGGCCCGGCGTCGGA
AGAAAAAGCGTCAGAGACCGTGGAGGTGGTACCGCCAACGAAGACCGCGA
TCGAGGCTGCAGTGGCCGCAGTGGAGGTCGCGACGGAAGCGGCGGGGGAG
ATCGAAACGGAGGTGCAAGCGACCAAACCATCATCGGATTCCGCCGACGG
GGGAGAGATTGACCATGGTAGTCCGGATGACGAAGATATTTTGAGAGATG
CGCTGGGTGATGATGGCGATGCTAACGCAGAGGATGACGAAGAGGCATTG
AAAGGTGCGCCAGCTCCCGCGCCCACTGACCCGGCGGCCGCAGAGATGCA
GGGGGTGGAAGAGATGGCAGAAGCGAAAGCAGAAGCGGTGGTGGGGACAT
CGGAAGCGGAAGCAAAAGAAAAAGCGGAAGAGGGGGCGGAGGGGGCGGGG
ACGGAAAAGGCATTGCCAACAACGTCTAGTATGGATGTTGAGAAAGGACA
TGGGGAGGTGGAGTTGTCAGCCGCGGCCACCGAGGCAGCAGCAGATAAAA
GAAACGGAAATGTTGAAGACGAAGCGCCGGAGGACGGAAGTGACTTGAGC
AGCGCGGGGGCTGGCGATGCGATGGTCGTCGAGAACGGGGGTAATGACGA
ACGAGAGGAGAAGGAGCAGGAAAGTGCGGCGATGGACGTGACGGGGGGGG
CGGAAGCGGGAGATGTGGGGGGTGAGGCGAAGGACTCGGAACAAGACGGA
GAGAAGGAGGTCGCCGAAGCCGCGGAACAGGAGCAGGAGGAAGAGGGAGC
AGGAGATATGGAACAGGAGGAAGAGGGAGCAGGAGAGCCGAAGCTCTCCG
AAGCGCAGATCAAGAAGTTTAAGGTGCAAAGGGTAGCGTTTTCGTCTTAG
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Coding sequence (CDS) from alignment at H-elongata_contig67000:112..3211-

>mRNA_H-elongata_contig67000.14306.1 ID=mRNA_H-elongata_contig67000.14306.1|Name=mRNA_H-elongata_contig67000.14306.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2424bp|location=Sequence derived from alignment at H-elongata_contig67000:112..3211- (Himanthalia elongata Himel1 dioecious)
GTGACCCAAGATCAGTTCGACGCGATCGACTTCTCGGACAACGAGATCAA
GAAGCTGGACAACTTCCCCCGCTACAAGCGCCTGTCTTCACTCCTGCTGT
GCAACAACCACGTCTCCCGGATCGCGACAGACCTCGGCACGCAGTTGCCC
AACCTGTCTTGTCTAATTCTCACCAATAACAAGGTGACCCAAGATCAGTT
CGACGCGATCGACTTCTCGGACAACGAGATCAAGAAGCTGGACAACTTCC
CCCGCTACAAGCGCCTGTCTTCACTCCTGCTGTGCAACAACCACGTCTCC
CGGATCGCGACAGACCTCGGCACGCAGTTGCCCAACCTGTCTTGTCTAAT
TCTCACCAATAACAAGCTGTCCACGCTGGCCGATTTGGAGGGCCTCAGGA
CGTGCAAAAAGCTGGCGATCTTGTCGCTGATGCACAACGAGGTAGTTAAC
AAGCAATACTACCGCCTCTACGCCATCAACCTGGTGCCGAGCCTCAAGCA
GCTCGATTTCCAGAAGGTCACTTTGAAGGCGAGTCCCCTGCTGTCCACGC
TGGCCGATTTGGAGGGCCTCAGGACGTGCAAAAAGCTGGCGATCTTGTCG
CTGATGCACAACGAGGTAGTTAACAAGCAATACTACCGCCTCTACGCCAT
CAACCTGGTGCCGAGCCTCAAGCAGCTCGATTTCCAGAAGGTCACTTTGA
AGGCGAGTCCCCTGGAGCGAGAGGAAGCGGGGCGATTGGCCAGGTCGCAG
GCGGGACAGGTGATGAGGAAGGACGTGGCACAGGAGGCCGTAAAGGCGAA
GATCTTCACCCCGGGGAAGCCGGCCGCTGCCGAGCAAAAGCTCACGGACG
AGCACCGAGCGATCTACGCCGAGCGCATTGCGAAAGCCACCACGGTGGAA
GAGGAGCGAGAGGAAGCGGGGCGATTGGCCAGGTCGCAGGCGGGACAGGT
GATGAGGAAGGACGTGGCACAGGAGGCCGTAAAGGCGAAGATCTTCACCC
CGGGGAAGCCGGCCGCTGCCGAGCAAAAGCTCACGGACGAGCACCGAGCG
ATCTACGCCGAGCGCATTGCGAAAGCCACCACGGTGGAAGAGGTCGAGAT
GCTCTCAAGGAAGATTCAGGCCGGTATCATACCTTCCGCGACGTACAAGA
TTCAGACCAGCGCGGCAGGGGCTGCCAACGGCTCCGCGCCGCCCGCGGTG
GCAGCCACTTCTGGGATTGCTCCCAGTGGTCGAGATGCTCTCAAGGAAGA
TTCAGGCCGGTATCATACCTTCCGCGACGTACAAGATTCAGACCAGCGCG
GCAGGGGCTGCCAACGGCTCCGCGCCGCCCGCGGTGGCAGCCACTTCTGG
GATTGCTCCCAGTGAAGCGAAAGCAGAAGCGGTGGTGGGGACATCGGAAG
CGGAAGCAAAAGAAAAAGCGGAAGAGGGGGCGGAGGGGGCGGGGACGGAA
AAGGCATTGCCAACAACGTCTAGTATGGATGTTGAGAAAGGACATGGGGA
GGTGGAGTTGTCAGCCGCGGCCACCGAGGCAGCAGCAGATAAAAGAAACG
GAAATGTTGAAGACGAAGCGCCGGAGGACGGAAGTGACTTGAGCAGCGCG
GGGGCTGGCGATGCGATGGTCGTCGAGAACGGGGGTAATGACGAACGAGA
GGAGAAGGAGCAGGAAAGTGCGGCGATGGACGTGACGGGGGGGGCGGAAG
CGGGAGATGTGGGGGGTGAGGCGAAGGACTCGGAACAAGACGGAGAGAAG
GAGGTCGCCGAAGCCGCGGAACAGGAGCAGGAGGAAGAGGGAGCAGGAGA
TATGGAACAGGAGGAAGAGGGAGCAGGAGAGCCGAAGCTCTCCGAAGCGC
AGATCAAGAAGTTTAAGGTGCAAAGGGTAGCGTTTTCGTCTTAGAAGCGA
AAGCAGAAGCGGTGGTGGGGACATCGGAAGCGGAAGCAAAAGAAAAAGCG
GAAGAGGGGGCGGAGGGGGCGGGGACGGAAAAGGCATTGCCAACAACGTC
TAGTATGGATGTTGAGAAAGGACATGGGGAGGTGGAGTTGTCAGCCGCGG
CCACCGAGGCAGCAGCAGATAAAAGAAACGGAAATGTTGAAGACGAAGCG
CCGGAGGACGGAAGTGACTTGAGCAGCGCGGGGGCTGGCGATGCGATGGT
CGTCGAGAACGGGGGTAATGACGAACGAGAGGAGAAGGAGCAGGAAAGTG
CGGCGATGGACGTGACGGGGGGGGCGGAAGCGGGAGATGTGGGGGGTGAG
GCGAAGGACTCGGAACAAGACGGAGAGAAGGAGGTCGCCGAAGCCGCGGA
ACAGGAGCAGGAGGAAGAGGGAGCAGGAGATATGGAACAGGAGGAAGAGG
GAGCAGGAGAGCCGAAGCTCTCCGAAGCGCAGATCAAGAAGTTTAAGGTG
CAAAGGGTAGCGTTTTCGTCTTAG
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