prot_H-elongata_contig66994.14301.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66994.14301.1
Unique Nameprot_H-elongata_contig66994.14301.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length264
Homology
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: D8LJK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK8_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 6.550e-87
Identity = 149/270 (55.19%), Postives = 173/270 (64.07%), Query Frame = 0
Query:    1 DEQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSES-SSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGG-----IEAWPEGGIPD-RWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGLALGGEISMRYPLLYATTITGGLYVLRLEAERVAAAAILSTDVETIQRRGPLRLRCIGFVRGNIIL 263
            DE+   SGS       WDV+TG CT  A+ PRN+VTCLK LS   SS VVQ               GL   +T+ GY +FPL LDVS  G +VLTS KGF+GAGCE KLWDLR   +PVREYTGHTQDTTACVF  SK+G  G    R G        WP    P  R MIATASKDGT+KIYDL++G++L+DHVE ECGGYTGLA+  +     P+ YA+TITGGLY LRLE E+VA A    T +      G LRLRC+GFVRGN IL
Sbjct:   39 DEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCLSGGPSSSVVQXXXXXXXXXXXXXXXGLRSSMTVDGYTFFPLFLDVSSDGHQVLTSCKGFNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVFVTSKEGGDGGSGAREGGYGLSPAPWPSLSAPSSRGMIATASKDGTVKIYDLADGSILVDHVEPECGGYTGLAIQRDSRTGGPVFYASTITGGLYALRLE-EKVATAGTSRTGLG----EGGLRLRCVGFVRGNPIL 303          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: A0A6H5JBE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE9_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 5.360e-85
Identity = 148/270 (54.81%), Postives = 174/270 (64.44%), Query Frame = 0
Query:    1 DEQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLS-ESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSV-GPKVVRGGIEAWPEGGIP-----DRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGLALGGEISMRYPLLYATTITGGLYVLRLEAERVAAAAILSTDVETIQRRGPLRLRCIGFVRGNIIL 263
            DE+A  SGSRDTS+R WDV+TG C   A+ PRN+VTCLK LS E SS V QGGEDL+LRVWD+R+GGL P +TI GY +FP                           LWDLR   +PVREYTGHTQDTTACVF  SK+G   G  V   G    P           R MIATASKDGT+KIYDL++G++L+DHVE ECGGYTGLA+  +     P+ YA+TITGGLY LRLE E VA AA   T+++     G LRLRC+GFVRGN IL
Sbjct:   73 DEKALYSGSRDTSIRAWDVQTGQCISSAKVPRNLVTCLKCLSGELSSSVAQGGEDLKLRVWDAREGGLRPSMTIDGYTFFP---------------------------LWDLRSPGIPVREYTGHTQDTTACVFVTSKEGGDDGSGVEENGYGVSPSPSTSLSAPSSRGMIATASKDGTVKIYDLADGSILVDHVEPECGGYTGLAIQRDSRTGAPVFYASTITGGLYALRLE-EEVATAAQSQTELQ----EGGLRLRCVGFVRGNPIL 310          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: A0A835ZHR6_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHR6_9STRA)

HSP 1 Score: 171 bits (433), Expect = 7.180e-49
Identity = 110/244 (45.08%), Postives = 134/244 (54.92%), Query Frame = 0
Query:    1 DEQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYL--SESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIK--IYDLSNGNLLIDHVEHECGGYTGLALGGEISMRYPLLYATTITGGLYVLRL---EAERVAAAAILS 237
            DE    SGSRDTS+RLWDV TG        PRN+VTCLK +   E ++VVVQGGEDL+LR+WD R     P  T+ G++YFPLCLDVSE G  +LT SKGF+  GCE +LWD R+T   V+EY GH QD TAC+        + P  +     A   GG      + TASKD TIK  ++   +G LL D  E                     L A T TGGLY L+L   EA    AA +LS
Sbjct:   43 DETHLWSGSRDTSVRLWDVSTGQQRGMVATPRNLVTCLKCMPGEEGTNVVVQGGEDLKLRLWDFRTPSSVPAQTLDGFVYFPLCLDVSEDGNYLLTGSKGFNSVGCEGRLWD-RRTGQVVQEYNGHAQDVTACL--------LAPAAL-----AASSGG-----AVITASKDQTIKARVWGRESGQLLSDFAEPH------------------RLCAATFTGGLYDLQLSEGEAGGETAAPVLS 249          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: K3WSF6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSF6_GLOUD)

HSP 1 Score: 158 bits (399), Expect = 9.460e-43
Identity = 81/198 (40.91%), Postives = 115/198 (58.08%), Query Frame = 0
Query:    1 DEQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGL 198
            DE + CSG RDT    WD+ TG    K    +N++TC K++     +VVQG EDL L++WD R     P  +  GY+YF LC+DVS  G   LTSSKGF+G GCE ++WD R+T   + E+ GH QDTT+C F  S  GS     V    ++     IP   +  TASKDG++K++D +  ++L + +E   G +T +
Sbjct:  129 DETSLCSGGRDTQTIFWDLTTGRLKAKNTTSQNVITCSKWVPVEP-LVVQGSEDLTLKLWDERTNLRAPAQSFHGYVYFALCVDVSPDGNYFLTSSKGFNGVGCEVRIWD-RRTGKQLYEFNGHQQDTTSCCFLPSATGSSSNDSVTSPADSVRASAIP---IPVTASKDGSVKVWDAATSSVLCEALEPSGGMFTSI 321          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: A0A067CE75_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CE75_SAPPC)

HSP 1 Score: 148 bits (373), Expect = 4.230e-39
Identity = 80/217 (36.87%), Postives = 116/217 (53.46%), Query Frame = 0
Query:    2 EQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGLALGGEISMRYPLLYATTITG 218
            E    SGSRDT   LWDV TG         +NIVTC+ ++ +  ++V QGGEDL +R+WD+R    +P  TI+GY+YFPL +D S+ G  +LTSSKGF+G GCE ++WD R  +L V E   H QD TAC +   K+                           TASKD +++I++ ++G L+    +   G +TG+A     S     ++ T+  G
Sbjct:  136 ETHLASGSRDTGTSLWDVTTGTRVQHTTTSQNIVTCMTWVPQCETLVAQGGEDLCVRLWDARSWK-SPAQTIQGYVYFPLSIDASDDGNYLLTSSKGFNGVGCEGRVWDRRTGKL-VTEMHVHLQDATACAYVRHKNA-----------------------FAVTASKDSSLRIWNSASGELVASSFDQSSGMFTGVACQSLESSDVVRVFTTSFAG 327          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: T0QNJ3_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QNJ3_SAPDV)

HSP 1 Score: 148 bits (373), Expect = 6.040e-39
Identity = 78/217 (35.94%), Postives = 117/217 (53.92%), Query Frame = 0
Query:    2 EQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGLALGGEISMRYPLLYATTITG 218
            E    SGSRDT   LWDV T A        +NIVTC+ ++ +  +++ QGGEDL +R+WD+R    +P  TI+GY+YFPL +D S+ G  +LTSSKGF+G GCE ++WD R  +L V E  GH QD +AC +   K+                           TASKD +++I++ ++G L+    +H  G +T +A     +     ++ T+  G
Sbjct:  140 ESNLASGSRDTGTSLWDVTTRARVQHTTTSQNIVTCMTWVPQCETLLAQGGEDLCVRLWDTRSWK-SPAQTIQGYVYFPLSIDASDDGNYLLTSSKGFNGVGCEGRVWDRRTGKL-VTEMHGHLQDASACAYMRHKNAYA-----------------------VTASKDSSLRIWNSASGELITSSFDHSSGMFTSVACRSVETSDEVTVFTTSFAG 331          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: A0A8K1CV93_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CV93_PYTOL)

HSP 1 Score: 146 bits (368), Expect = 6.780e-38
Identity = 86/224 (38.39%), Postives = 122/224 (54.46%), Query Frame = 0
Query:    1 DEQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSK--DGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGG-YTGLALGGEISMRYPLLYATTITGGLY 221
            DE + CSG RDT    WD+ T     K    +N++TC K++  +  VV+QG EDL +++WD R    TPV T++GY+YFPLCLDVS  G   +TSSKGF+G G E ++WD R+    + ++ GH QD +AC F      D S G   V          GIP      +ASKDG+IK+++++  N L+       G  +T LA  G+       + A T  G L+
Sbjct:  156 DETSLCSGGRDTQTMFWDLTTAKIKSKNTTAQNVITCSKWVP-TEHVVLQGSEDLSVKLWDERSALRTPVQTLRGYVYFPLCLDVSRDGLYFMTSSKGFNGVGAEVRVWD-RRVGKQLLQFEGHQQDASACCFLPRGVLDSSEGEAPVPNASN-----GIPTP---VSASKDGSIKVWNVNAENQLLCEANEPSGRMFTSLASTGDDGT----VLAATFNGDLH 365          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: A0A1V9Z8M6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8M6_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.170e-37
Identity = 86/234 (36.75%), Postives = 122/234 (52.14%), Query Frame = 0
Query:    2 EQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKG-------------FDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGLALGGEISMRYPLLYATTITGGLYV 222
            E    SGSRDTS+ LWDV T          +NIVTC+ ++    ++V QGGEDLR+R+WDSR    +PV TI+GY+YFPL LDVS+ G  +LTSSKG             F+G GCE ++WD R+T   V E  GH QD TAC +   ++  V                        TASKD ++++++ ++G L+    +H  G +T L            ++ ++ TG L V
Sbjct:  141 ETQLASGSRDTSVSLWDVATTTQLQHTTTSQNIVTCMAWVPIHDTLVAQGGEDLRVRIWDSR-AWKSPVQTIEGYVYFPLSLDVSDDGNYILTSSKGTILSWICWLMPLGFNGVGCEGRVWD-RRTGKQVCEMAGHLQDATACSYIKQRNEYV-----------------------LTASKDSSLRVWNSASGALVSSTYDHALGMFTALTSLPPDDAGIVRIFTSSFTGHLAV 349          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: A0A485KVW2_9STRA (Aste57867_12386 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVW2_9STRA)

HSP 1 Score: 144 bits (362), Expect = 4.630e-37
Identity = 79/198 (39.90%), Postives = 110/198 (55.56%), Query Frame = 0
Query:    2 EQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGLA 199
            E    SGSRDT + LWDV T          +NIVTC+ ++   ++VV QGGEDLR+R+WD+R     P  TI+GYIYFPL +  S+ G  +LTSSKGF+  GCE ++WD R+T   V E  GH QD TAC +   ++          GI               TASKD +I+++D + G+LL    +   G +T ++
Sbjct:  168 ESTLASGSRDTGVSLWDVATSMRRQHTITSQNIVTCMAWVPRDANVVAQGGEDLRVRLWDAR-AWKAPTQTIEGYIYFPLSIACSDDGHYLLTSSKGFNAVGCEGRVWD-RRTGKQVAEMRGHAQDATACAYIPGRNHE--------GI---------------TASKDSSIRVWDTTTGDLLASTQDANAGMFTSVS 340          
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Match: A0A5D6Y005_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y005_9STRA)

HSP 1 Score: 148 bits (373), Expect = 8.920e-37
Identity = 95/263 (36.12%), Postives = 132/263 (50.19%), Query Frame = 0
Query:    2 EQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQGGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFDGAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGIEAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGL-ALGGEISMRYPLLYATTITGGLYVLRLEAERVAAAAILSTDVETIQRRGPLRLRCIGFVRGNIIL 263
            E   CSG RDT    WD+ TG    K    +N+VTC K++     +VVQG EDL L+ WD R    TP     GY+YF L +DVS     +LTSSKGF+G GCE ++WD R+T   + E++GH QD T+C F      S              +  IP   +  TASKDGT+K++D +   +L +  E   G +TGL A+ G        L A+T  G ++     A +  A  I +++V    R  P  LR +   R   +L
Sbjct:  173 ETTLCSGGRDTQTIFWDLVTGKLKAKNTTSQNVVTCSKWIP-LEPLVVQGSEDLTLKFWDERTELRTPAQIFHGYVYFALSVDVSPDTSYILTSSKGFNGVGCEVRVWD-RRTGKQLLEFSGHQQDATSCCFLPGTSDS--------------QSAIP---IPVTASKDGTVKVWDAAASRVLCEASEPTGGMFTGLCAVSGST------LLASTFHGAVHAFEFNAAQ--AIYIYASEV----RAAPSALRVVVMGRDAAVL 404          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66994.14301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJK8_ECTSI6.550e-8755.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBE9_9PHAE5.360e-8554.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZHR6_9STRA7.180e-4945.08WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
K3WSF6_GLOUD9.460e-4340.91Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A067CE75_SAPPC4.230e-3936.87Uncharacterized protein (Fragment) n=1 Tax=Saprole... [more]
T0QNJ3_SAPDV6.040e-3935.94Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A8K1CV93_PYTOL6.780e-3838.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9Z8M6_9STRA1.170e-3736.75Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A485KVW2_9STRA4.630e-3739.90Aste57867_12386 protein n=1 Tax=Aphanomyces stella... [more]
A0A5D6Y005_9STRA8.920e-3736.12Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 164..178
score: 32.66
coord: 5..19
score: 37.76
coord: 48..62
score: 28.36
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 114..177
e-value: 9.1E-5
score: 31.8
coord: 66..110
e-value: 64.0
score: 5.6
coord: 21..61
e-value: 1.1
score: 16.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 117..177
e-value: 0.028
score: 15.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..27
score: 10.876
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 159..186
score: 8.604
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..202
e-value: 1.0E-28
score: 102.5
IPR040066WD repeat-containing protein 31PANTHERPTHR19869SPERMATID WD-REPEAT PROTEINcoord: 1..189
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..70
score: 15.505
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66994contigH-elongata_contig66994:440..2941 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66994.14301.1mRNA_H-elongata_contig66994.14301.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66994 440..2941 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66994.14301.1 ID=prot_H-elongata_contig66994.14301.1|Name=mRNA_H-elongata_contig66994.14301.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=264bp
DEQAFCSGSRDTSLRLWDVETGACTIKAREPRNIVTCLKYLSESSSVVVQ
GGEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSEHGPEVLTSSKGFD
GAGCEAKLWDLRQTRLPVREYTGHTQDTTACVFFHSKDGSVGPKVVRGGI
EAWPEGGIPDRWMIATASKDGTIKIYDLSNGNLLIDHVEHECGGYTGLAL
GGEISMRYPLLYATTITGGLYVLRLEAERVAAAAILSTDVETIQRRGPLR
LRCIGFVRGNIIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR040066WDR31
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf