mRNA_H-elongata_contig66874.14290.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig66874.14290.1 vs. uniprot
Match: A0A6H5KDR8_9PHAE (Peptidase_M14 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDR8_9PHAE) HSP 1 Score: 196 bits (497), Expect = 2.330e-56 Identity = 89/128 (69.53%), Postives = 104/128 (81.25%), Query Frame = 1
Query: 1 RMENKLDPNRDFPYQQDSSRCMTTIAAR---SINEVWRDHIFQLAVTFHGGMVAMAYEWGSPNHKKKRNPDGSWQDVSPDHKAQKEVTKRLSRFAGGFKADGKTFEAYPTGRMNELVYAVAGGMEDWV 375
R EN +DPNRDFPY Q CMTTI AR S+NEVWR+H FQLAVTFHGGMV MAYEWGSP+H +++ G+W D+SPDH+AQKE+T LS+FAGGFK +G+TF+ YPTGRMNELVY VAGGMEDW
Sbjct: 128 RWENGMDPNRDFPYGQMPQHCMTTITARQRESVNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQDRKGNWLDISPDHEAQKELTAGLSQFAGGFKENGRTFKPYPTGRMNELVYPVAGGMEDWA 255
BLAST of mRNA_H-elongata_contig66874.14290.1 vs. uniprot
Match: A0A7S4DI67_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DI67_HETAK) HSP 1 Score: 152 bits (385), Expect = 4.370e-45 Identity = 69/122 (56.56%), Postives = 90/122 (73.77%), Query Frame = 1
Query: 7 ENKLDPNRDFPYQQDSSRCMTTIAARSINEVWRDHIFQLAVTFHGGMVAMAYEWGSPNHKKKRNPDGSWQDVSPDHKAQKEVTKRLSRFAGGFKADGKTFEAYPTGRMNELVYAVAGGMEDW 372
EN +DPNRDFPY Q + CM ++AAR++NEVWR+H+FQLA+TFHGGM A+AYEWG+PNH G +DVSPD + Q ++ +LS ++G F+ AYPTGR+N+LVY V GGMEDW
Sbjct: 1 ENSVDPNRDFPYDQSGASCMRSVAARAVNEVWREHLFQLALTFHGGMTAIAYEWGAPNHP------GPNKDVSPDDRGQVVLSNKLSLYSGHFQGQS----AYPTGRLNDLVYPVRGGMEDW 112
BLAST of mRNA_H-elongata_contig66874.14290.1 vs. uniprot
Match: A0A0P1ASX7_PLAHL (Peptidase_M14 domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASX7_PLAHL) HSP 1 Score: 149 bits (375), Expect = 4.540e-39 Identity = 74/124 (59.68%), Postives = 88/124 (70.97%), Query Frame = 1
Query: 1 RMENKLDPNRDFPYQQDSSRCMTTIAARSINEVWRDHIFQLAVTFHGGMVAMAYEWGSPNHKKKRNPDGSWQDVSPDHKAQKEVTKRLSRFAGGFKADGKTFEAYPTGRMNELVYAVAGGMEDW 372
R E LDPNRDF Y + CM TI AR +NE+WRDHIFQLAVTFHGG A+AYEWGSP+H NP S + SPDH AQ E++ L+ FAG F+ DG + YPTG MN++VY V+GGMEDW
Sbjct: 157 REELTLDPNRDFNYMRTGVECMQTITARVVNEIWRDHIFQLAVTFHGGTRAIAYEWGSPDHYLDGNPRKS-SEKSPDHTAQLELSTTLAHFAGAFQ-DG---QLYPTGTMNDIVYGVSGGMEDW 275
BLAST of mRNA_H-elongata_contig66874.14290.1 vs. uniprot
Match: A0A8K1CHN6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHN6_PYTOL) HSP 1 Score: 148 bits (374), Expect = 7.340e-39 Identity = 70/124 (56.45%), Postives = 86/124 (69.35%), Query Frame = 1
Query: 1 RMENKLDPNRDFPYQQDSSRCMTTIAARSINEVWRDHIFQLAVTFHGGMVAMAYEWGSPNHKKKRNPDGSWQDVSPDHKAQKEVTKRLSRFAGGFKADGKTFEAYPTGRMNELVYAVAGGMEDW 372
R E +DPNRD+ Y + S CM T+ +R +NE+WR+HIFQLAVT+HGGM A++YEWGSPNH NP S + PDHKAQ ++ LS F G F ADG YPTG MN++VY V GGMEDW
Sbjct: 185 REELNVDPNRDYNYMRSGSHCMQTMTSRVVNEIWREHIFQLAVTYHGGMRAISYEWGSPNHYLPNNPHRS--EKCPDHKAQLQIANSLSTFGGAF-ADGSN---YPTGTMNDIVYGVTGGMEDW 302
BLAST of mRNA_H-elongata_contig66874.14290.1 vs. uniprot
Match: A0A225V2V5_9STRA (Peptidase_M14 domain-containing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V2V5_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.450e-38 Identity = 65/124 (52.42%), Postives = 86/124 (69.35%), Query Frame = 1
Query: 1 RMENKLDPNRDFPYQQDSSRCMTTIAARSINEVWRDHIFQLAVTFHGGMVAMAYEWGSPNHKKKRNPDGSWQDVSPDHKAQKEVTKRLSRFAGGFKADGKTFEAYPTGRMNELVYAVAGGMEDW 372
R E +DPNRDFPY D +CM T+AAR++NE+WRDH+FQL +TFH G + YEWG+ NH K+ N D SPD ++Q+++T+ +SRF G F+ G E YP G MN++VYAV GG EDW
Sbjct: 162 RRELGVDPNRDFPYNLDDDQCMVTMAARALNELWRDHLFQLGITFHAGRECITYEWGAHNHVKESNES----DKSPDDRSQQQLTRIMSRFGGQFEDSG---EYYPDGTMNDVVYAVDGGYEDW 278
BLAST of mRNA_H-elongata_contig66874.14290.1 vs. uniprot
Match: A0A5D6XU14_9STRA (Peptidase_M14 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XU14_9STRA) HSP 1 Score: 142 bits (359), Expect = 7.420e-37 Identity = 65/120 (54.17%), Postives = 87/120 (72.50%), Query Frame = 1
Query: 16 LDPNRDFPYQQDSSRCMTTIAARSINEVWRDHIFQLAVTFHGGMVAMAYEWGSPNHKKKRNPDGSWQDVSPDHKAQKEVTKRLSRFAGGFKADGKTFEAYPTGRMNELVYAVAGGMEDWV 375
+DPNRD+ Y ++ CMTT+ +R +NE+WR+H+FQLA+TFHGGM A++YEWGSP+H + N S + SPDH+AQ + L+ +AG F ADG E YPTG MN++VY V GGMEDW
Sbjct: 171 VDPNRDYNYLREPHECMTTMTSRVVNEIWREHLFQLAITFHGGMRAVSYEWGSPDHYLRHNRQRS--EKSPDHRAQARLAALLAGYAGAF-ADG---ELYPTGTMNDVVYGVTGGMEDWA 284
BLAST of mRNA_H-elongata_contig66874.14290.1 vs. uniprot
Match: A0A2P4Y514_9STRA (Peptidase_M14 domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y514_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.030e-36 Identity = 64/124 (51.61%), Postives = 85/124 (68.55%), Query Frame = 1
Query: 1 RMENKLDPNRDFPYQQDSSRCMTTIAARSINEVWRDHIFQLAVTFHGGMVAMAYEWGSPNHKKKRNPDGSWQDVSPDHKAQKEVTKRLSRFAGGFKADGKTFEAYPTGRMNELVYAVAGGMEDW 372
R E K+DPNRDFPY S +CM T+AARS+NE+WRDH+FQL +TFH G + YEWG+ NH K+ + SPD ++Q+++ + +SRF G F+ G E YP G MN++VYAV GG EDW
Sbjct: 159 RRELKMDPNRDFPYNLKSDQCMVTMAARSLNELWRDHLFQLGITFHAGTECITYEWGAKNHVKESGKS----EKSPDDRSQQQLARIMSRFGGKFEDSG---EYYPDGTMNDVVYAVDGGYEDW 275
BLAST of mRNA_H-elongata_contig66874.14290.1 vs. uniprot
Match: K3WED6_GLOUD (Peptidase_M14 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WED6_GLOUD) HSP 1 Score: 140 bits (354), Expect = 2.540e-36 Identity = 67/124 (54.03%), Postives = 85/124 (68.55%), Query Frame = 1
Query: 1 RMENKLDPNRDFPYQQDSSRCMTTIAARSINEVWRDHIFQLAVTFHGGMVAMAYEWGSPNHKKKRNPDGSWQDVSPDHKAQKEVTKRLSRFAGGFKADGKTFEAYPTGRMNELVYAVAGGMEDW 372
R E +DPNRD+ Y + CM T+ +R +NE+WR+HIFQLA+TFHGGM A++YEWGSP+H K N G + SPDH AQ ++ LS +AG F DG YPTG MN++VY V GGMEDW
Sbjct: 185 REELGIDPNRDYNYMRKPEECMVTMTSRVVNEIWREHIFQLAITFHGGMRAVSYEWGSPDHYLKNN--GQRSEKSPDHLAQFQLANLLSTYAGAFP-DGNL---YPTGTMNDIVYGVTGGMEDW 302
BLAST of mRNA_H-elongata_contig66874.14290.1 vs. uniprot
Match: A0A329T3C8_9STRA (Peptidase_M14 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T3C8_9STRA) HSP 1 Score: 141 bits (355), Expect = 2.770e-36 Identity = 70/127 (55.12%), Postives = 88/127 (69.29%), Query Frame = 1
Query: 1 RMENKLDPNRDFPYQQDSSRCMTTIAARSINEVWRDHIFQLAVTFHGGMVAMAYEWGSPNHK---KKRNPDGSWQDVSPDHKAQKEVTKRLSRFAGGFKADGKTFEAYPTGRMNELVYAVAGGMEDW 372
R E +DPNRD+ Y + + CM T+ +R +NE+WRDHIFQLAVTFHGG A+AYEWGSP+H K+ NP + SPDH AQ ++ L+ FAG F DGK YPTG MN++VY V+GGMEDW
Sbjct: 172 REELTVDPNRDYNYMRSGAECMQTMTSRVVNEIWRDHIFQLAVTFHGGTRAVAYEWGSPDHYLNGKESNPS----EKSPDHMAQLQIGNTLANFAGVFP-DGKL---YPTGTMNDVVYGVSGGMEDW 290
BLAST of mRNA_H-elongata_contig66874.14290.1 vs. uniprot
Match: A0A225WZZ5_9STRA (Peptidase_M14 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZZ5_9STRA) HSP 1 Score: 139 bits (350), Expect = 4.290e-36 Identity = 68/127 (53.54%), Postives = 87/127 (68.50%), Query Frame = 1
Query: 1 RMENKLDPNRDFPYQQDSSRCMTTIAARSINEVWRDHIFQLAVTFHGGMVAMAYEWGSPNHK---KKRNPDGSWQDVSPDHKAQKEVTKRLSRFAGGFKADGKTFEAYPTGRMNELVYAVAGGMEDW 372
R E ++DPNRD+ Y + CM T+ +R +NE+WRDHIFQLAVTFHGG A++YEWGSP+H ++NP + SPDH AQ ++ L+ FAG F DGK YPTG MN++VY V GGMEDW
Sbjct: 172 REELRVDPNRDYNYMKSGRECMQTMTSRVVNEIWRDHIFQLAVTFHGGTRAVSYEWGSPDHYLHGDQKNPS----EKSPDHMAQFQIANTLANFAGVFP-DGKL---YPTGTMNDVVYGVTGGMEDW 290 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66874.14290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig66874.14290.1 >prot_H-elongata_contig66874.14290.1 ID=prot_H-elongata_contig66874.14290.1|Name=mRNA_H-elongata_contig66874.14290.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp MENKLDPNRDFPYQQDSSRCMTTIAARSINEVWRDHIFQLAVTFHGGMVAback to top mRNA from alignment at H-elongata_contig66874:786..2915- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig66874.14290.1 ID=mRNA_H-elongata_contig66874.14290.1|Name=mRNA_H-elongata_contig66874.14290.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2130bp|location=Sequence derived from alignment at H-elongata_contig66874:786..2915- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig66874:786..2915- >mRNA_H-elongata_contig66874.14290.1 ID=mRNA_H-elongata_contig66874.14290.1|Name=mRNA_H-elongata_contig66874.14290.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=798bp|location=Sequence derived from alignment at H-elongata_contig66874:786..2915- (Himanthalia elongata Himel1 dioecious)back to top |