prot_H-elongata_contig66779.14280.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66779.14280.1
Unique Nameprot_H-elongata_contig66779.14280.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
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BLAST of mRNA_H-elongata_contig66779.14280.1 vs. uniprot
Match: D8LTK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK7_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 2.850e-42
Identity = 75/81 (92.59%), Postives = 80/81 (98.77%), Query Frame = 0 
Query:    3 FVQVMVKGEGLRVVKHNRAGGSQVRIIRYDPEMKALVWNSKRYMKKAGSANVPIMGIKRVGREGNTVSVTAAGRGTIGFEP 83
            F +VMVKGEGLRVVKHNR+GGSQ+RIIRYDPE+KALVWNSKRYMKKAGSANVPI+GIKRVGREGNTVSVTAAGRGTIGFEP
Sbjct:  378 FHKVMVKGEGLRVVKHNRSGGSQMRIIRYDPEIKALVWNSKRYMKKAGSANVPIVGIKRVGREGNTVSVTAAGRGTIGFEP 458
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BLAST of mRNA_H-elongata_contig66779.14280.1 vs. uniprot
Match: A0A6H5KD05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD05_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.610e-41
Identity = 75/81 (92.59%), Postives = 80/81 (98.77%), Query Frame = 0 
Query:    3 FVQVMVKGEGLRVVKHNRAGGSQVRIIRYDPEMKALVWNSKRYMKKAGSANVPIMGIKRVGREGNTVSVTAAGRGTIGFEP 83
            F +VMVKGEGLRVVKHNR+GGSQ+RIIRYDPE+KALVWNSKRYMKKAGSANVPI+GIKRVGREGNTVSVTAAGRGTIGFEP
Sbjct:  494 FHKVMVKGEGLRVVKHNRSGGSQMRIIRYDPEIKALVWNSKRYMKKAGSANVPIVGIKRVGREGNTVSVTAAGRGTIGFEP 574
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66779.14280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTK7_ECTSI2.850e-4292.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD05_9PHAE1.610e-4192.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66779contigH-elongata_contig66779:573..1830 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66779.14280.1mRNA_H-elongata_contig66779.14280.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66779 573..1830 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66779.14280.1 ID=prot_H-elongata_contig66779.14280.1|Name=mRNA_H-elongata_contig66779.14280.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
MPFVQVMVKGEGLRVVKHNRAGGSQVRIIRYDPEMKALVWNSKRYMKKAG
SANVPIMGIKRVGREGNTVSVTAAGRGTIGFEP
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