prot_H-elongata_contig6666.14268.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig6666.14268.1
Unique Name	prot_H-elongata_contig6666.14268.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	113

Homology

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BLAST of mRNA_H-elongata_contig6666.14268.1 vs. uniprot
Match: D7FLD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD9_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.880e-53
Identity = 80/109 (73.39%), Postives = 96/109 (88.07%), Query Frame = 0

Query:    1 MATTPLISIETEHNSIIHDAQLDYYGKKLATASSDHNITIFEIVGENQHNQIERLTGHEGPVWQVAWAHPKFGVILASCSYDRSIIIYRESPPGTWSRVHKHDDLHTSS 109
            MATT L +I+T H+  IHDAQLDYYGKKLATASSD  I IFE+VG++ HNQ++ L+GH+GPVWQV WAHPKFGV+LASCSYD+S+II+RE+PPGTWS VHKH+ LHTSS
Sbjct:    1 MATTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHE-LHTSS 108

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BLAST of mRNA_H-elongata_contig6666.14268.1 vs. uniprot
Match: A0A836CBZ9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBZ9_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.390e-42
Identity = 68/102 (66.67%), Postives = 83/102 (81.37%), Query Frame = 0

Query:    1 MATTPLISIETEHNSIIHDAQLDYYGKKLATASSDHNITIFEIVGENQHNQIERLTGHEGPVWQVAWAHPKFGVILASCSYDRSIIIYRESPPGTWSRVHKH 102
            M+ + L++IET+HN +IHDAQLDYY +KLATASSD  I IF+I GE   N+   LTGHEGPVWQVAWAHP+FGV+LASCSYD S++I+ ESPPG W+ VH H
Sbjct:    1 MSVSTLVNIETQHNEMIHDAQLDYYSRKLATASSDRTIEIFDINGEVT-NRSAVLTGHEGPVWQVAWAHPRFGVLLASCSYDGSVLIHTESPPGVWTTVHAH 101

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BLAST of mRNA_H-elongata_contig6666.14268.1 vs. uniprot
Match: A0A7S3UQX2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQX2_HETAK)

HSP 1 Score: 145 bits (366), Expect = 2.350e-42
Identity = 63/102 (61.76%), Postives = 81/102 (79.41%), Query Frame = 0

Query:    1 MATTPLISIETEHNSIIHDAQLDYYGKKLATASSDHNITIFEIVGENQHNQIERLTGHEGPVWQVAWAHPKFGVILASCSYDRSIIIYRESPPGTWSRVHKH 102
            MA++  + IET H  +IHDAQ DYY KK+ATASSD  I I++I  ++ +N+   LTGHEGPVWQVAWAHPK+GV+LASCSYD  +I++RESPPG WS++H H
Sbjct:    1 MASSAPVMIETSHEDMIHDAQFDYYAKKVATASSDRTIQIYDIT-DDVYNKSAVLTGHEGPVWQVAWAHPKYGVLLASCSYDGQVILHRESPPGVWSQIHSH 101

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BLAST of mRNA_H-elongata_contig6666.14268.1 vs. uniprot
Match: A0A7S2FN42_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FN42_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.490e-40
Identity = 63/106 (59.43%), Postives = 84/106 (79.25%), Query Frame = 0

Query:    4 TPLISIETEHNSIIHDAQLDYYGKKLATASSDHNITIFEIVGENQHNQIERLTGHEGPVWQVAWAHPKFGVILASCSYDRSIIIYRESPPGTWSRVHKHDDLHTSS 109
            TPL++ +T+H+ +IHDAQLDYY +KLATASSD +I ++++ GE  +     L GHEGPVWQ AWAHPKFGV+LASCSYD  ++I+RESPPG W+ +H+H  +H SS
Sbjct:    3 TPLVTFDTQHDDMIHDAQLDYYSRKLATASSDRSIKVWDVQGE-VYTLAATLNGHEGPVWQCAWAHPKFGVLLASCSYDGKVLIHRESPPGVWTPIHEHT-MHDSS 106

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BLAST of mRNA_H-elongata_contig6666.14268.1 vs. uniprot
Match: A0A7S0FIQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FIQ5_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.670e-40
Identity = 59/105 (56.19%), Postives = 83/105 (79.05%), Query Frame = 0

Query:    7 ISIETEHNSIIHDAQLDYYGKKLATASSDHNITIFEIVGENQHNQIERLTGHEGPVWQVAWAHPKFGVILASCSYDRSIIIYRESPPGTWSRVHKHDDLHTSSVN 111
            I I+T+H+ ++HD+QLDYYG KLATASSD  + I+++ G N +     L GHEGPVW+++W+HPKFGV+LASCS+D S++++RESPPG+W+ +H    LH SSVN
Sbjct:    6 IVIDTQHDDMVHDSQLDYYGTKLATASSDRTVKIYDVSG-NTYAHTATLQGHEGPVWELSWSHPKFGVVLASCSFDGSVLVHRESPPGSWTLIHAARALHDSSVN 109

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BLAST of mRNA_H-elongata_contig6666.14268.1 vs. uniprot
Match: K3XB55_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3XB55_GLOUD)

HSP 1 Score: 142 bits (359), Expect = 1.450e-39
Identity = 60/100 (60.00%), Postives = 79/100 (79.00%), Query Frame = 0

Query:    3 TTPLISIETEHNSIIHDAQLDYYGKKLATASSDHNITIFEIVGENQHNQIERLTGHEGPVWQVAWAHPKFGVILASCSYDRSIIIYRESPPGTWSRVHKH 102
            T P++SI+T+H  +IHDAQLDYYGK+LAT SSD  + ++++ GE Q+N+ + LTGHEGPVWQVAWAHPKFG +LASCSYD  +IIYRE     W++ + H
Sbjct:    2 TAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTVKVYDVTGEVQNNE-QLLTGHEGPVWQVAWAHPKFGALLASCSYDGKVIIYREQSLNQWAQTYVH 100

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BLAST of mRNA_H-elongata_contig6666.14268.1 vs. uniprot
Match: H3GAW1_PHYRM (Uncharacterized protein n=7 Tax=Peronosporaceae TaxID=4777 RepID=H3GAW1_PHYRM)

HSP 1 Score: 140 bits (354), Expect = 8.270e-39
Identity = 59/100 (59.00%), Postives = 80/100 (80.00%), Query Frame = 0

Query:    3 TTPLISIETEHNSIIHDAQLDYYGKKLATASSDHNITIFEIVGENQHNQIERLTGHEGPVWQVAWAHPKFGVILASCSYDRSIIIYRESPPGTWSRVHKH 102
            + P++SI+T+H  +IHDAQLDYYGK+LAT SSD  I ++++ G+ Q+N+ + LTGHEGPVWQVAWAHPKFGV+LA+CSYD  +IIYRE     W++ + H
Sbjct:    2 SAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVTGDVQNNE-QILTGHEGPVWQVAWAHPKFGVLLAACSYDGKVIIYREQSLNQWTQAYMH 100

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BLAST of mRNA_H-elongata_contig6666.14268.1 vs. uniprot
Match: D0NKZ1_PHYIT (Protein transport protein SEC13 n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NKZ1_PHYIT)

HSP 1 Score: 139 bits (350), Expect = 3.270e-38
Identity = 58/100 (58.00%), Postives = 80/100 (80.00%), Query Frame = 0

Query:    3 TTPLISIETEHNSIIHDAQLDYYGKKLATASSDHNITIFEIVGENQHNQIERLTGHEGPVWQVAWAHPKFGVILASCSYDRSIIIYRESPPGTWSRVHKH 102
            + P++SI+T+H  +IHDAQLDYYGK+LAT SSD  I ++++ G+ Q+N+ + LTGHEGPVWQV+WAHPKFGV+LA+CSYD  +IIYRE     W++ + H
Sbjct:    2 SAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVAGDVQNNE-QILTGHEGPVWQVSWAHPKFGVLLAACSYDGKVIIYREQSLNQWTQAYVH 100

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BLAST of mRNA_H-elongata_contig6666.14268.1 vs. uniprot
Match: A0A7S2MDV0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MDV0_9STRA)

HSP 1 Score: 139 bits (350), Expect = 5.470e-38
Identity = 60/102 (58.82%), Postives = 79/102 (77.45%), Query Frame = 0

Query:    1 MATTPLISIETEHNSIIHDAQLDYYGKKLATASSDHNITIFEIVGENQHNQIERLTGHEGPVWQVAWAHPKFGVILASCSYDRSIIIYRESPPGTWSRVHKH 102
            MA + L++ +T+H+ +IHDAQLDYY +KLATASSD  I ++++ G+  +     LTGHEGPVWQVAWAHPKFGV+LASCSYD  ++I+RES  G WS +H H
Sbjct:   15 MAASALVTFDTQHDDMIHDAQLDYYSRKLATASSDRTIKVWDVQGK-VYTLAATLTGHEGPVWQVAWAHPKFGVLLASCSYDGKVLIHRESQTGVWSPIHSH 115

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BLAST of mRNA_H-elongata_contig6666.14268.1 vs. uniprot
Match: A0A7S2UZ04_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ04_9STRA)

HSP 1 Score: 137 bits (346), Expect = 2.290e-37
Identity = 59/102 (57.84%), Postives = 78/102 (76.47%), Query Frame = 0

Query:    1 MATTPLISIETEHNSIIHDAQLDYYGKKLATASSDHNITIFEIVGENQHNQIERLTGHEGPVWQVAWAHPKFGVILASCSYDRSIIIYRESPPGTWSRVHKH 102
            MA    ++I+T+H  +IHDAQ DYY KK+AT SSD  I I+++ G+  +N+   LTGH+GPVWQVAWAHPKFGV+LASCSYD  +II+RESP   W+++H H
Sbjct:    1 MAADQPVTIDTQHEDMIHDAQFDYYAKKVATCSSDRTIQIYDVTGD-VYNKSAVLTGHDGPVWQVAWAHPKFGVLLASCSYDGQVIIHRESPQSCWTQIHVH 101

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig6666.14268.1 vs. uniprot

BLAST of mRNA_H-elongata_contig6666.14268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FLD9_ECTSI	1.880e-53	73.39	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A836CBZ9_9STRA	1.390e-42	66.67	WD40-repeat-containing domain protein n=1 Tax=Trib...	[more]
A0A7S3UQX2_HETAK	2.350e-42	61.76	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A7S2FN42_9STRA	1.490e-40	59.43	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A7S0FIQ5_9STRA	1.670e-40	56.19	Hypothetical protein (Fragment) n=1 Tax=Minutocell...	[more]
K3XB55_GLOUD	1.450e-39	60.00	Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4...	[more]
H3GAW1_PHYRM	8.270e-39	59.00	Uncharacterized protein n=7 Tax=Peronosporaceae Ta...	[more]
D0NKZ1_PHYIT	3.270e-38	58.00	Protein transport protein SEC13 n=16 Tax=Peronospo...	[more]
A0A7S2MDV0_9STRA	5.470e-38	58.82	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S2UZ04_9STRA	2.290e-37	57.84	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 48..89 e-value: 2.2E-4 score: 30.6 coord: 2..42 e-value: 0.43 score: 19.3
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 54..88 e-value: 0.0019 score: 19.0
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..112 e-value: 2.6E-36 score: 127.0
IPR037363	Sec13/Seh1 family	PANTHER	PTHR11024	NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER	coord: 6..111
IPR037596	Protein Sec13	PANTHER	PTHR11024:SF2	PROTEIN SEC13 HOMOLOG	coord: 6..111
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 10..98 score: 9.309
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 6..111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig6666	contig	H-elongata_contig6666:580..918 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig6666.14268.1	mRNA_H-elongata_contig6666.14268.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig6666 580..918 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig6666.14268.1 ID=prot_H-elongata_contig6666.14268.1|Name=mRNA_H-elongata_contig6666.14268.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=113bp
MATTPLISIETEHNSIIHDAQLDYYGKKLATASSDHNITIFEIVGENQHN
QIERLTGHEGPVWQVAWAHPKFGVILASCSYDRSIIIYRESPPGTWSRVH
KHDDLHTSSVNR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR037363	Sec13/Seh1_fam
IPR037596	Sec13
IPR017986	WD40_repeat_dom
IPR036322	WD40_repeat_dom_sf