prot_H-elongata_contig6659.14263.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6659.14263.1
Unique Nameprot_H-elongata_contig6659.14263.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length216
Homology
BLAST of mRNA_H-elongata_contig6659.14263.1 vs. uniprot
Match: D8LTS5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTS5_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 2.470e-49
Identity = 108/188 (57.45%), Postives = 126/188 (67.02%), Query Frame = 0
Query:   30 IGRRLVTALELVGYRARVFPDGVLEVEGMMCQRNCGTTVWKALEGVAGVARAEVSFAERR-ARVWARDGSRLPLSILVDAVECIGFGARVVGAGGRGERGGDGSVLSSVAPPHGEYEDEEDDEVEVELPKMLIRGEYEKGFGEQGRATAVSVFSVSGMSCASCVGNVERFVGRLEGVDDVRVALLAEK 216
            + R  V  LE VG+ A + P  VLE+EGMMCQ++CGTTV   LE V GV RAEVS+AE R ARVWARDG RLP+S+LV+AVE +GFGARVV   G  E+ GD     +              E + +LPKML+  E   G GE     AV VFSVSGMSCASCVGNVE+FV  L+GVDDVRVALLAEK
Sbjct:  230 VARLAVEELEAVGFDASLAPSAVLEIEGMMCQKSCGTTVRGCLEAVPGVDRAEVSYAEGRLARVWARDGPRLPVSVLVEAVEDVGFGARVVR--GPAEKDGDSGTSPAAEEKRPSGVGGGAGEADTKLPKMLLEKEGGAGGGE----VAVGVFSVSGMSCASCVGNVEKFVSALDGVDDVRVALLAEK 411          
BLAST of mRNA_H-elongata_contig6659.14263.1 vs. uniprot
Match: D8LTL7_ECTSI (Heavy metal translocating P-type ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL7_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 2.740e-26
Identity = 84/213 (39.44%), Postives = 106/213 (49.77%), Query Frame = 0
Query:   34 LVTALELVGYRARVFPDGVLEVEGMMCQRNCGTTVWKALEGVAGVARAEVSFAERRARVWARDGSRLPLSI--LVDAVECIGFGARVVGAGGRGERGGDGSVLSSVAP-PHGEYEDEEDDEVEVELPKMLIRGEYEKGFGEQGRAT-----------------------------AVSVFSVSGMSCASCVGNVERFVGRLEGVDDVRVALLA 214
            LV A+E +G+ A   P   LEV GMMCQ +CGTTV +ALE VAGV+RAEVSFAE+RARVW   G  + LS   LVDAV  +GF A    A          + ++  AP P  +   ++     V   ++       K  G    A                              +   F+V GMSCA+CVG VERFVG + GV +VRVALLA
Sbjct:  204 LVDAIETIGFEAAEAPAVELEVSGMMCQNSCGTTVRQALENVAGVSRAEVSFAEKRARVWGSSGGGVLLSTGTLVDAVVTVGFDASGAAAPXXXXXXXXXAGVNGGAPIPAKKQPRQQLRPSSVTGRELNTESRGSKNGGRSASAVXXXXXXXXXXXXXXXXXXXXXXXXXQLVLSTGSFTVEGMSCAACVGKVERFVGAMRGVGEVRVALLA 416          
BLAST of mRNA_H-elongata_contig6659.14263.1 vs. uniprot
Match: A0A662Y8Q1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y8Q1_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.230e-21
Identity = 73/196 (37.24%), Postives = 94/196 (47.96%), Query Frame = 0
Query:   34 LVTALELVGYRARVFPDGVLE-------------VEGMMCQRNCGTTVWKALEGVAGVARAEVSFAERRARVWARDGSRLPLSILVDAVECIGFGARVVGAGGRGERGGDGSVLSSVAPPHGEYEDEEDDEVEVELPKMLIRGEYEKGFGEQGRATAVSVFSVSGMSCASCVGNVERFVGRLEGVDDVRVALLAEK 216
            LV A+E VG+ A V     ++             VEGMMCQ+NCGTTV  AL GV GVA A V F  R A V  R      L  LVD VEC+GF A    A          + +   A    E   +E  +V +E+P              Q      +VF V GMSCA+CV  +E  +G++EGV D RV L+++K
Sbjct:   57 LVDAVECVGFGAAVKDTTTMKTERETNPLEIALLVEGMMCQKNCGTTVENALRGVDGVASAAVDFDRRLATVTLRSAGSTTLEELVDMVECVGFEASAYDAA-------KAAAIKLQARKEAEAAKQEKSDVALEMP--------------QATGHPRAVFRVEGMSCAACVKAIEDLLGKVEGVVDCRVGLISQK 231          
BLAST of mRNA_H-elongata_contig6659.14263.1 vs. uniprot
Match: V9F3H5_PHYPR (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora parasitica P1569 TaxID=1317065 RepID=V9F3H5_PHYPR)

HSP 1 Score: 97.1 bits (240), Expect = 4.170e-20
Identity = 75/197 (38.07%), Postives = 97/197 (49.24%), Query Frame = 0
Query:   34 LVTALELVGYRARV-FPDGV-------------LEVEGMMCQRNCGTTVWKALEGVAGVARAEVSFAERRARVWARDGSRLPLSILVDAVECIGFGARVVGAGGRGERGGDGSVLSSVAPPHGEYEDEEDDEVEVELPKMLIRGEYEKGFGEQGRATAVSVFSVSGMSCASCVGNVERFVGRLEGVDDVRVALLAEK 216
            LV A+E VG+ A V  P  +             L VEGMMCQ+NCGTTV  AL GV GVA   VSF  R+A V         L  LVD VEC+GF A             D +  +++         +E +EV V++P +          G   RA    VF V GMSCA+CV  +E +VG+ EGV   RV L+++K
Sbjct:   65 LVDAVECVGFGAAVKTPTNMQTDSETQDPLTIELLVEGMMCQKNCGTTVENALRGVDGVADVVVSFEHRKATVTLLRPGSTTLEQLVDMVECVGFEASAY----------DAAKAAAIKLQAQXXXXQETEEVAVDMPDV----------GGHPRA----VFHVEGMSCAACVKAIEDYVGKAEGVLHCRVGLISQK 237          
BLAST of mRNA_H-elongata_contig6659.14263.1 vs. uniprot
Match: A0A6A3PGA8_9STRA (Uncharacterized protein (Fragment) n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3PGA8_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 5.700e-20
Identity = 74/192 (38.54%), Postives = 91/192 (47.40%), Query Frame = 0
Query:   34 LVTALELVGYRARVFPDGVLE---------VEGMMCQRNCGTTVWKALEGVAGVARAEVSFAERRARVWARDGSRLPLSILVDAVECIGFGARVVGAGGRGERGGDGSVLSSVAPPHGEYEDEEDDEVEVELPKMLIRGEYEKGFGEQGRATAVSVFSVSGMSCASCVGNVERFVGRLEGVDDVRVALLAEK 216
            LV A+E VG+ A V P    +         VEGMMCQ+NCG TV  AL GV GVARA VSF +R+A V  R      L  LVDAVEC+GF A    A          + +   A            ++ V L      G               +VF V GMSCA+CV  +E  VGR EGV   RV L+++K
Sbjct:   29 LVDAVECVGFGAAVKPPAQTQTQTLELELLVEGMMCQKNCGATVENALRGVEGVARAVVSFEQRKAVVTLRRPGSATLQELVDAVECVGFEAGAYDAA-------KAAAVKLQAXXXXXXXXXXXXQLSVALDVRDAAGHPR------------AVFHVEGMSCAACVKAIEDHVGRAEGVLHCRVGLISQK 201          
BLAST of mRNA_H-elongata_contig6659.14263.1 vs. uniprot
Match: V9F4F8_PHYPR (Uncharacterized protein (Fragment) n=3 Tax=Phytophthora TaxID=4783 RepID=V9F4F8_PHYPR)

HSP 1 Score: 97.1 bits (240), Expect = 1.020e-19
Identity = 74/197 (37.56%), Postives = 98/197 (49.75%), Query Frame = 0
Query:   34 LVTALELVGYRARV-FPDGV-------------LEVEGMMCQRNCGTTVWKALEGVAGVARAEVSFAERRARVWARDGSRLPLSILVDAVECIGFGARVVGAGGRGERGGDGSVLSSVAPPHGEYEDEEDDEVEVELPKMLIRGEYEKGFGEQGRATAVSVFSVSGMSCASCVGNVERFVGRLEGVDDVRVALLAEK 216
            LV A+E VG+ A V  P  +             L VEGMMCQ+NCGTTV  AL GV GVA   VSF  R+A V         L  LVD VEC+GF A             D +  +++     +   +E ++V V++P +          G   RA    VF V GMSCA+CV  +E +VG+ EGV   RV L+++K
Sbjct:   68 LVDAVECVGFGAAVKTPTNMQTDSETQDPLTIELLVEGMMCQKNCGTTVENALRGVDGVADVVVSFEHRKATVTLLRPGSTTLEQLVDMVECVGFEASAY----------DAAKAAAIKLQAQKXXQQETEDVAVDMPDV----------GGHPRA----VFHVEGMSCAACVKAIEDYVGKAEGVLHCRVGLISQK 240          
BLAST of mRNA_H-elongata_contig6659.14263.1 vs. uniprot
Match: W2GTE3_PHYPR (Uncharacterized protein (Fragment) n=3 Tax=Phytophthora TaxID=4783 RepID=W2GTE3_PHYPR)

HSP 1 Score: 97.1 bits (240), Expect = 1.070e-19
Identity = 74/197 (37.56%), Postives = 98/197 (49.75%), Query Frame = 0
Query:   34 LVTALELVGYRARV-FPDGV-------------LEVEGMMCQRNCGTTVWKALEGVAGVARAEVSFAERRARVWARDGSRLPLSILVDAVECIGFGARVVGAGGRGERGGDGSVLSSVAPPHGEYEDEEDDEVEVELPKMLIRGEYEKGFGEQGRATAVSVFSVSGMSCASCVGNVERFVGRLEGVDDVRVALLAEK 216
            LV A+E VG+ A V  P  +             L VEGMMCQ+NCGTTV  AL GV GVA   VSF  R+A V         L  LVD VEC+GF A             D +  +++     +   +E ++V V++P +          G   RA    VF V GMSCA+CV  +E +VG+ EGV   RV L+++K
Sbjct:   48 LVDAVECVGFGAAVKTPTNMQTDSETQDPLTIELLVEGMMCQKNCGTTVENALRGVDGVADVVVSFEHRKATVTLLRPGSTTLEQLVDMVECVGFEASAY----------DAAKAAAIKLQAQKXXQQETEDVAVDMPDV----------GGHPRA----VFHVEGMSCAACVKAIEDYVGKAEGVLHCRVGLISQK 220          
BLAST of mRNA_H-elongata_contig6659.14263.1 vs. uniprot
Match: H3HCV5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCV5_PHYRM)

HSP 1 Score: 96.7 bits (239), Expect = 1.640e-19
Identity = 74/196 (37.76%), Postives = 98/196 (50.00%), Query Frame = 0
Query:   53 LEVEGMMCQRNCGTTVWKALEGVAGVARAEVSFAERRARVWARDGSRLPLSILVDAVECIGFGARVVGAGGRGE-----------RGGDGSVLSSVA-----------PPHGEYEDEEDDEVEVELPKMLIRGEYEKGFGEQGRATAV----------SVFSVSGMSCASCVGNVERFVGRLEGVDDVRVALLAEK 216
            L V+GMMC +NCG TV  AL  V GVA A VSF  R ARV    G+ +  + LVDAVEC+GFGA ++  G   +           RG DG   + V+            P     ++  D VE    K+  + + +K    Q  + AV          +VF V GMSCA+CV  +E FVGR EGV   RV L+++K
Sbjct:  384 LAVDGMMCMKNCGATVQTALRSVDGVASAVVSFERRSARVQCEPGANVTANDLVDAVECVGFGAALLVEGMMCQKNCGATVENALRGVDGVAAAVVSFEQRKATVTLLHPGSATLEQLVDMVEAAAIKLQAQKQQKK---MQDESVAVDVPDAAGHPRAVFHVEGMSCAACVKAIEDFVGRAEGVLHCRVGLISQK 576          
BLAST of mRNA_H-elongata_contig6659.14263.1 vs. uniprot
Match: A0A3F2RK46_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RK46_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 4.410e-19
Identity = 74/193 (38.34%), Postives = 95/193 (49.22%), Query Frame = 0
Query:   34 LVTALELVGYRARVFPDGVLE----------VEGMMCQRNCGTTVWKALEGVAGVARAEVSFAERRARVWARDGSRLPLSILVDAVECIGFGARVVGAGGRGERGGDGSVLSSVAPPHGEYEDEEDDEVEVELPKMLIRGEYEKGFGEQGRATAVSVFSVSGMSCASCVGNVERFVGRLEGVDDVRVALLAEK 216
            LV A+E VG+ A V      E          V+GMMCQ+NCGTTV  AL GV GVA A VSF +R A V         L  LVD VEC+GF A    A    E       +   A    E + EE+  V +++P               G   AV  F V GMSCA+CV  +E ++G++EGV   RV L+++K
Sbjct:  541 LVDAVECVGFGAAVKEPAKQENNKELTIRLLVKGMMCQKNCGTTVENALSGVDGVASAVVSFEDRMATVTLSSPGSTTLEELVDMVECVGFEASAYDAVKAAE-------IKLQAKKQKEQQKEEES-VTLDVPDAT------------GHPRAV--FHVEGMSCAACVKAIENYLGKVEGVVYCRVGLISQK 711          
BLAST of mRNA_H-elongata_contig6659.14263.1 vs. uniprot
Match: D0NV33_PHYIT (Copper-transporting ATPase, putative n=11 Tax=Phytophthora TaxID=4783 RepID=D0NV33_PHYIT)

HSP 1 Score: 93.6 bits (231), Expect = 1.950e-18
Identity = 61/164 (37.20%), Postives = 84/164 (51.22%), Query Frame = 0
Query:   53 LEVEGMMCQRNCGTTVWKALEGVAGVARAEVSFAERRARVWARDGSRLPLSILVDAVECIGFGARVVGAGGRGERGGDGSVLSSVAPPHGEYEDEEDDEVEVELPKMLIRGEYEKGFGEQGRATAVSVFSVSGMSCASCVGNVERFVGRLEGVDDVRVALLAEK 216
            L VEGMMCQ+NCGTTV  AL GV GVA   VSF +R+A +         L  LVD VEC+GF A             D +  + +     + + +E + V V++P +                   +VF V GMSCA+CV  +E +VG+ EGV   RV L+++K
Sbjct:  101 LLVEGMMCQKNCGTTVENALRGVDGVADVVVSFEQRKATITLLRPGSATLEQLVDMVECVGFEASAY----------DAAKAAVIKLQAQKQKQQETENVAVDIPDVASHPR--------------AVFHVEGMSCAACVKAIEDYVGKAEGVLHCRVGLISQK 240          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6659.14263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTS5_ECTSI2.470e-4957.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LTL7_ECTSI2.740e-2639.44Heavy metal translocating P-type ATPase n=2 Tax=Ec... [more]
A0A662Y8Q1_9STRA1.230e-2137.24Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
V9F3H5_PHYPR4.170e-2038.07Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A6A3PGA8_9STRA5.700e-2038.54Uncharacterized protein (Fragment) n=6 Tax=Phytoph... [more]
V9F4F8_PHYPR1.020e-1937.56Uncharacterized protein (Fragment) n=3 Tax=Phytoph... [more]
W2GTE3_PHYPR1.070e-1937.56Uncharacterized protein (Fragment) n=3 Tax=Phytoph... [more]
H3HCV5_PHYRM1.640e-1937.76Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A3F2RK46_9STRA4.410e-1938.34Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
D0NV33_PHYIT1.950e-1837.20Copper-transporting ATPase, putative n=11 Tax=Phyt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 180..214
e-value: 2.6E-7
score: 31.0
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 178..216
score: 15.199
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 50..118
score: 12.054
NoneNo IPR availableGENE3D3.30.70.100coord: 178..216
e-value: 1.0E-10
score: 43.7
NoneNo IPR availableGENE3D3.30.70.100coord: 51..120
e-value: 3.9E-14
score: 54.7
NoneNo IPR availablePANTHERPTHR43520:SF8ATP7, ISOFORM Bcoord: 34..120
coord: 54..216
NoneNo IPR availablePANTHERPTHR43520FAMILY NOT NAMEDcoord: 34..120
coord: 54..216
IPR017969Heavy-metal-associated, conserved sitePROSITEPS01047HMA_1coord: 183..213
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 52..121
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 176..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6659contigH-elongata_contig6659:3927..4878 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6659.14263.1mRNA_H-elongata_contig6659.14263.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6659 3927..4879 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6659.14263.1 ID=prot_H-elongata_contig6659.14263.1|Name=mRNA_H-elongata_contig6659.14263.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=216bp
FLEEGCARAWTAVQSGKGKGKGREEFVVDIGRRLVTALELVGYRARVFPD
GVLEVEGMMCQRNCGTTVWKALEGVAGVARAEVSFAERRARVWARDGSRL
PLSILVDAVECIGFGARVVGAGGRGERGGDGSVLSSVAPPHGEYEDEEDD
EVEVELPKMLIRGEYEKGFGEQGRATAVSVFSVSGMSCASCVGNVERFVG
RLEGVDDVRVALLAEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom
IPR017969Heavy-metal-associated_CS
IPR036163HMA_dom_sf